Non-Coding RNA Search

Ss1.1-Mixc-0035m10.5

Sequence:


               
               TGTCCTTGCCTTCGGGGAGGGCTTCCCAGACCAGTTGTAGCTGCGAAGAGCAGAAAGGAT
GAGGTGGCTTTTCTCTCTGCCCTCGATGTGGATGGTAGTGGCAGTGACTTCTTGGATCAT
CATGGCTGCAGCCGAGGACACCTCGGAAGCAAGAAGCTGCTCTGAATGTCACAGCAATGC
CACTTGCGTGGAGGACGGGGCTGCCACGACGTGCACCTGCCGCGTGGGCTTCACTGGCGA
CGGCCTCGAGTGCGTGGACCTGGATGAATGCTCCCTTCCAGGAGCCCACGACTGCTCTGC
TAACAGCAGCTGCGTGAACACGCCGGGCTCCTACACGTGCGTCTGCTCTGACGGCTTCCG
CCTGAGCCCAGAGCTCGGCTGCATAGACGTGGACGAGTGCGCGGAGCCCGGGCTCAGCCG
CTGCCACGCCCTGGCCACCTGCGTCAACGGTGAGGGCAACTACTCATGCGTGTGCCCCGC
GGGCTACTGGGGGGACGGGTGGCACTGTGAGTGCTCCCCGGGCTCCTGTGGGCCGGGCCT
GGACTGCGTGCCTAGCGGTGACGCGCTCATGTGCGCGGATCCGTGCCAGGCGCACCGCAT
CCTGGATGAGTATTGGCGCAGCGCCGGGTACGGGGCAGGCTATGACTGCGACTCCGACCT
GAGTGGCTGGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCCTTGCCTTCGGGGAGGGCTTCCCAGACCAGTTGTAGCTGCGAAGAGCAGAAAGGAT
GAGGTGGCTTTTCTCTCTGCCCTCGATGTGGATGGTAGTGGCAGTGACTTCTTGGATCAT
CATGGCTGCAGCCGAGGACACCTCGGAAGCAAGAAGCTGCTCTGAATGTCACAGCAATGC
CACTTGCGTGGAGGACGGGGCTGCCACGACGTGCACCTGCCGCGTGGGCTTCACTGGCGA
CGGCCTCGAGTGCGTGGACCTGGATGAATGCTCCCTTCCAGGAGCCCACGACTGCTCTGC
TAACAGCAGCTGCGTGAACACGCCGGGCTCCTACACGTGCGTCTGCTCTGACGGCTTCCG
CCTGAGCCCAGAGCTCGGCTGCATAGACGTGGACGAGTGCGCGGAGCCCGGGCTCAGCCG
CTGCCACGCCCTGGCCACCTGCGTCAACGGTGAGGGCAACTACTCATGCGTGTGCCCCGC
GGGCTACTGGGGGGACGGGTGGCACTGTGAGTGCTCCCCGGGCTCCTGTGGGCCGGGCCT
GGACTGCGTGCCTAGCGGTGACGCGCTCATGTGCGCGGATCCGTGCCAGGCGCACCGCAT
CCTGGATGAGTATTGGCGCAGCGCCGGGTACGGGGCAGGCTATGACTGCGACTCCGACCT
GAGTGGCTGGTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|23451246|gb|AAN32714.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|23451246|gb|AAN32714.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               269-388, - strand, RNAz p=0.550658

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               269-388, - strand, RNAz p=0.550658

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               149-672, gnl|bosTau2|chr25 (15859197-15858674)
               

               
               149-672, gnl|Hg17|chr16 (20268039-20267516)
               

               
               149-672, gnl|Mm7|chr7 (115399733-115399207)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               149-672, gnl|bosTau2|chr25 (15859197-15858674)
               

               
               149-672, gnl|Hg17|chr16 (20268039-20267516)
               

               
               149-672, gnl|Mm7|chr7 (115399733-115399207)

	149-672, gnl\|bosTau2\|chr25 (15859197-15858674)
	149-672, gnl\|Hg17\|chr16 (20268039-20267516)
	149-672, gnl\|Mm7\|chr7 (115399733-115399207)