Non-Coding RNA Search

Ss1.1-Mixc-0036b16.5

Sequence:


               
               ACCCCCGCCGCCTGCCCGCCTAGCCCCCGCGATGCGGCGGGGCCTGTGATCAGCCGCGGA
CCCTAGGACACTCCGCCTCACAACTACCTCAGCGCCACCTCCGCCTGCCGCCCCGCCCCT
GCCCCAGGTCTCTGCACTGCCATAAGGCGCCCCCGCCTGAGGCTTCTTCACTCCTCTACC
ATGTTCCAGCGCTTTACCAGCCTCTTCTTCAGCACCCCGGCGCCCCCGGAGGACCCCAAC
TGCCCCCGAGCCTTTGTCTCTGAGGAAGATGAAGTGGATGGCTGGCTCATCATTGACCTG
CCGGAGGGGCCCGGACTCGGGCCTGCCCGTCTCCAGAGCAGCCCCCTGGAGGACCTCCTC
ATCGAGCACCCAAGCATGTCAGTTTATGTTACTGGCAGCACCATAGTGCTGGAGCCTGGA
CCTCCTTCCCCACACCCTGATGCTGCCCTGCCGGATGGAAACCTTAGTGATGGGGAGTTG
GCGCCTGCTCACCGGGAGCCCCGGGCCCTGCACCACGCTGCTGCCCCTCTGCCGGCACGG
GCTGCACTGCTGGAGAAGGCAGGCCAGGCACGGCGGCTGCAGCGGGCCCGGCAGCGGGCA
GAGCGCCACGCGCTGAGTGCCAAGGTGGTGCAACGGCAGAACCGCGCCCGCGAGAGCCGT
CCTCGCCGGCCCAAGCACCAGGGCAGCTTTGTCTACCAGCCGTGCCAGCGCCAATTCAAC
TACTGAGTGTCCGCTGGCTGTGCCACAAGCCCCTCGCTGACTCCTGACCCCTGTCCAGCC
CCTCCGCCACAGCCAGTGTGCTGCTCAAGAGGCACCTGCAGCCCACCTGATACTACATCC
TCCCTCCTTAGGTGTGTGAGGTGGGGTGATAGCCACTCTCTCCCCTGCGACTCCATTTCC
CTATCTCTGATCCTCTAGTCTGCCTCTGAACCTCCTTGCCCTTCATCCTCTGAAATGCAT
GGAGCGCGACCGCAAGCTATTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCCCGCCGCCTGCCCGCCTAGCCCCCGCGATGCGGCGGGGCCTGTGATCAGCCGCGGA
CCCTAGGACACTCCGCCTCACAACTACCTCAGCGCCACCTCCGCCTGCCGCCCCGCCCCT
GCCCCAGGTCTCTGCACTGCCATAAGGCGCCCCCGCCTGAGGCTTCTTCACTCCTCTACC
ATGTTCCAGCGCTTTACCAGCCTCTTCTTCAGCACCCCGGCGCCCCCGGAGGACCCCAAC
TGCCCCCGAGCCTTTGTCTCTGAGGAAGATGAAGTGGATGGCTGGCTCATCATTGACCTG
CCGGAGGGGCCCGGACTCGGGCCTGCCCGTCTCCAGAGCAGCCCCCTGGAGGACCTCCTC
ATCGAGCACCCAAGCATGTCAGTTTATGTTACTGGCAGCACCATAGTGCTGGAGCCTGGA
CCTCCTTCCCCACACCCTGATGCTGCCCTGCCGGATGGAAACCTTAGTGATGGGGAGTTG
GCGCCTGCTCACCGGGAGCCCCGGGCCCTGCACCACGCTGCTGCCCCTCTGCCGGCACGG
GCTGCACTGCTGGAGAAGGCAGGCCAGGCACGGCGGCTGCAGCGGGCCCGGCAGCGGGCA
GAGCGCCACGCGCTGAGTGCCAAGGTGGTGCAACGGCAGAACCGCGCCCGCGAGAGCCGT
CCTCGCCGGCCCAAGCACCAGGGCAGCTTTGTCTACCAGCCGTGCCAGCGCCAATTCAAC
TACTGAGTGTCCGCTGGCTGTGCCACAAGCCCCTCGCTGACTCCTGACCCCTGTCCAGCC
CCTCCGCCACAGCCAGTGTGCTGCTCAAGAGGCACCTGCAGCCCACCTGATACTACATCC
TCCCTCCTTAGGTGTGTGAGGTGGGGTGATAGCCACTCTCTCCCCTGCGACTCCATTTCC
CTATCTCTGATCCTCTAGTCTGCCTCTGAACCTCCTTGCCCTTCATCCTCTGAAATGCAT
GGAGCGCGACCGCAAGCTATTCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|56203895|emb|CAI19374.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56203895|emb|CAI19374.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               5-119, gnl|bosTau2|chr13 (46844949-46844834)
               

               
               5-119, gnl|Hg17|chr20 (32755854-32755967)
               

               
               5-119, gnl|Mm7|chr2 (155122763-155122872)
               


               
               304-440, gnl|bosTau2|chr13 (46839697-46839561)
               

               
               304-440, gnl|Hg17|chr20 (32760820-32760956)
               

               
               304-440, gnl|Mm7|chr2 (155126858-155126991)
               


               
               473-931, gnl|bosTau2|chr13 (46838978-46838521)
               

               
               473-931, gnl|Hg17|chr20 (32761522-32761949)
               

               
               473-931, gnl|Mm7|chr2 (155127397-155127844)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-119, gnl|bosTau2|chr13 (46844949-46844834)
               

               
               5-119, gnl|Hg17|chr20 (32755854-32755967)
               

               
               5-119, gnl|Mm7|chr2 (155122763-155122872)
               


               
               304-440, gnl|bosTau2|chr13 (46839697-46839561)
               

               
               304-440, gnl|Hg17|chr20 (32760820-32760956)
               

               
               304-440, gnl|Mm7|chr2 (155126858-155126991)
               


               
               473-931, gnl|bosTau2|chr13 (46838978-46838521)
               

               
               473-931, gnl|Hg17|chr20 (32761522-32761949)
               

               
               473-931, gnl|Mm7|chr2 (155127397-155127844)

	5-119, gnl\|bosTau2\|chr13 (46844949-46844834)
	5-119, gnl\|Hg17\|chr20 (32755854-32755967)
	5-119, gnl\|Mm7\|chr2 (155122763-155122872)

	304-440, gnl\|bosTau2\|chr13 (46839697-46839561)
	304-440, gnl\|Hg17\|chr20 (32760820-32760956)
	304-440, gnl\|Mm7\|chr2 (155126858-155126991)

	473-931, gnl\|bosTau2\|chr13 (46838978-46838521)
	473-931, gnl\|Hg17\|chr20 (32761522-32761949)
	473-931, gnl\|Mm7\|chr2 (155127397-155127844)