Ss1.1-Mixc-0038,m01.5
|
GTCATCAGAGGCATTGAGACCGCCGGGAAGGCGATTTACTTCACCGCCTTGTTCCCTTAC
GTGGTCCTCAGCGTCTTCCTCGTCAGAGGACTCACCCTGCCGGGAGCCACCGAGGGGCTG
CTCCATCTGTTCACGCCTGACATGCAGGTCCTCCGGAATCCCCGGGTGTGGCTGGACGCG
GCCACCCAGATTTTCTTCTCTCTGTCCCTGGCCTTCGGAGGACACATCGCTTTTGCAAGT
TACAACCCACCCAGGAACCACTGCGAGAGGGACGCGGTGACCATCGCCCTGGTCAACAGC
ATGACCTCCCTGTACGCGTCCATCGCCGTCTTCTCCGTCCTGGGCTTCAAAGCGGCCAAC
GACCACGGGCGCTGCCTGGACGGAAACATCCTCCTCCTCCTCAACGCCTTCGATCTCCCG
GACCAGAGCGTCTCCAGGGACGACTACGCAGCTGTCCTCTCGCACCTGAACGCCACCCAG
CCAGAGCGGGTGGCCAGGCTCCCCCTGCAGGTCTGCCACCTGGAGGACTTTCTGGATAAG
AGCGCCTCGGGCACCGGCCTGGCCTTCATCGTCTTCGCGGAGGCCGTGCTCCACATGCCG
GGGGCCCCGGTCTGGGCCGTGCTCTTCTTCGGGATGCTGTTCAGCCTCGGCCTGTCGTCC
ATGTTTGGGAACATGGAGAGCATCCTCACGCCGCTCTTCGACCAGTGGGTCAGGCCCCGA
CGCGTCCCCAAGGAGGTCCTGACCGGGCTGGTCTGGCTGGNCTGCTTCCTCCTGGCCAGC
GGCTTCACGCTGCAGTCGGGAAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTCATCAGAGGCATTGAGACCGCCGGGAAGGCGATTTACTTCACCGCCTTGTTCCCTTAC
GTGGTCCTCAGCGTCTTCCTCGTCAGAGGACTCACCCTGCCGGGAGCCACCGAGGGGCTG
CTCCATCTGTTCACGCCTGACATGCAGGTCCTCCGGAATCCCCGGGTGTGGCTGGACGCG
GCCACCCAGATTTTCTTCTCTCTGTCCCTGGCCTTCGGAGGACACATCGCTTTTGCAAGT
TACAACCCACCCAGGAACCACTGCGAGAGGGACGCGGTGACCATCGCCCTGGTCAACAGC
ATGACCTCCCTGTACGCGTCCATCGCCGTCTTCTCCGTCCTGGGCTTCAAAGCGGCCAAC
GACCACGGGCGCTGCCTGGACGGAAACATCCTCCTCCTCCTCAACGCCTTCGATCTCCCG
GACCAGAGCGTCTCCAGGGACGACTACGCAGCTGTCCTCTCGCACCTGAACGCCACCCAG
CCAGAGCGGGTGGCCAGGCTCCCCCTGCAGGTCTGCCACCTGGAGGACTTTCTGGATAAG
AGCGCCTCGGGCACCGGCCTGGCCTTCATCGTCTTCGCGGAGGCCGTGCTCCACATGCCG
GGGGCCCCGGTCTGGGCCGTGCTCTTCTTCGGGATGCTGTTCAGCCTCGGCCTGTCGTCC
ATGTTTGGGAACATGGAGAGCATCCTCACGCCGCTCTTCGACCAGTGGGTCAGGCCCCGA
CGCGTCCCCAAGGAGGTCCTGACCGGGCTGGTCTGGCTGGNCTGCTTCCTCCTGGCCAGC
GGCTTCACGCTGCAGTCGGGAAAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
539-746, gnl|bosTau2|chr20 (42676917-42676710) |
|
539-746, gnl|canFam2|chr34 (14321366-14321228) |
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539-746, gnl|danRer3|chr9 (2904438-2904297) |
|
539-746, gnl|dasNov1|scaffold_13705 (11823-11687) |
|
539-746, gnl|echTel1|scaffold_291978 (77409-77543) |
|
539-746, gnl|fr1|chrUn (1080249-1080105) |
|
539-746, gnl|hg17|chr5 (1296657-1296801) |
|
539-746, gnl|Hg17|chr5 (1296668-1296875) |
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539-746, gnl|loxAfr1|scaffold_25657 (14782-14916) |
|
539-746, gnl|mm7|chr13 (70599419-70599277) |
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539-746, gnl|Mm7|chr13 (70599408-70599201) |
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539-746, gnl|monDom2|scaffold_4 (15656783-15656920) |
|
539-746, gnl|oryCun1|scaffold_183823 (8013-8154) |
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539-746, gnl|panTro1|chr4 (1328249-1328386) |
|
539-746, gnl|rheMac2|chr6 (930973-931110) |
|
539-746, gnl|rn3|chr1 (30429022-30429164) |
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539-746, gnl|tetNig1|chr21 (4130416-4130556) |
|
539-746, gnl|xenTro1|scaffold_26 (1501329-1501464) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
539-746, gnl|bosTau2|chr20 (42676917-42676710) |
|
539-746, gnl|canFam2|chr34 (14321366-14321228) |
|
539-746, gnl|danRer3|chr9 (2904438-2904297) |
|
539-746, gnl|dasNov1|scaffold_13705 (11823-11687) |
|
539-746, gnl|echTel1|scaffold_291978 (77409-77543) |
|
539-746, gnl|fr1|chrUn (1080249-1080105) |
|
539-746, gnl|hg17|chr5 (1296657-1296801) |
|
539-746, gnl|Hg17|chr5 (1296668-1296875) |
|
539-746, gnl|loxAfr1|scaffold_25657 (14782-14916) |
|
539-746, gnl|mm7|chr13 (70599419-70599277) |
|
539-746, gnl|Mm7|chr13 (70599408-70599201) |
|
539-746, gnl|monDom2|scaffold_4 (15656783-15656920) |
|
539-746, gnl|oryCun1|scaffold_183823 (8013-8154) |
|
539-746, gnl|panTro1|chr4 (1328249-1328386) |
|
539-746, gnl|rheMac2|chr6 (930973-931110) |
|
539-746, gnl|rn3|chr1 (30429022-30429164) |
|
539-746, gnl|tetNig1|chr21 (4130416-4130556) |
|
539-746, gnl|xenTro1|scaffold_26 (1501329-1501464) |
