Non-Coding RNA Search

Ss1.1-Mixc-0042,i24.5

Sequence:


               
               TGCCGAAGGCCTGNCCGCAGTACTTGCACTTGAAGGCGTGTTGACGGGTGGACAGGTGGA
TGTGCGTGTGCCGCTCCAGCCCCTGTTTGGTGGTGAACTTCCTCTCGCAGTGCTGACACG
GAAACAGGAACGTTTCGAACACGTCTCCGTTGGCCTCCTCTTTAGCTCTGGGAACGGTGC
TAACAGGGGTTACCTCTGGGGAGGCCTCGGGAGTTTCCTTCAAAAGCGCTTTTGGTTCTT
CTAATAAATCCTCTGGCTTCTCGTCACACCGTATCTCAGGCTCCTTTGGGGAACTTTCAT
TTGGCACGTCAGCTACTGTGTCCCCCTCGTCTTCCAGCTCCTCCTCTTCCTCCTCTTCCT
CCTCCTCCTCCTCCTCCACATCATTGGCCTCACAACGCGTGGCTTCCAGCTCCGCTTCTG
GTCCAGTCTGAGGCTCGCAGGCAGGGGCAGGGACCTCACGCTCTGGAAGCACATCCTGAC
TGCCAGCCTCCTGCGGGACGGCCGGCTGCTCGACGGCAGAGGCTGAAGGCTTCTCGTCTT
CGTCTTGGGGGCCTTCCGCAGAATCTCTCATATTTGCAGAGCTGGAATCTGGCTCACTTG
TCTTCAGTTGTGTATCTTCGGTTTTGTTTGCTTTGTTTTTATTCTCTTGGGATTTTTTCT
TCCCTTTCCTGCTTTTCGGGGAGCTCCGCTTGCTCCGGGCGCTGGCTCTGCTCCGCTTGG
TCTTTCCTGCTTTCGGGGAGCTCCGCTTGTACCGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCGAAGGCCTGNCCGCAGTACTTGCACTTGAAGGCGTGTTGACGGGTGGACAGGTGGA
TGTGCGTGTGCCGCTCCAGCCCCTGTTTGGTGGTGAACTTCCTCTCGCAGTGCTGACACG
GAAACAGGAACGTTTCGAACACGTCTCCGTTGGCCTCCTCTTTAGCTCTGGGAACGGTGC
TAACAGGGGTTACCTCTGGGGAGGCCTCGGGAGTTTCCTTCAAAAGCGCTTTTGGTTCTT
CTAATAAATCCTCTGGCTTCTCGTCACACCGTATCTCAGGCTCCTTTGGGGAACTTTCAT
TTGGCACGTCAGCTACTGTGTCCCCCTCGTCTTCCAGCTCCTCCTCTTCCTCCTCTTCCT
CCTCCTCCTCCTCCTCCACATCATTGGCCTCACAACGCGTGGCTTCCAGCTCCGCTTCTG
GTCCAGTCTGAGGCTCGCAGGCAGGGGCAGGGACCTCACGCTCTGGAAGCACATCCTGAC
TGCCAGCCTCCTGCGGGACGGCCGGCTGCTCGACGGCAGAGGCTGAAGGCTTCTCGTCTT
CGTCTTGGGGGCCTTCCGCAGAATCTCTCATATTTGCAGAGCTGGAATCTGGCTCACTTG
TCTTCAGTTGTGTATCTTCGGTTTTGTTTGCTTTGTTTTTATTCTCTTGGGATTTTTTCT
TCCCTTTCCTGCTTTTCGGGGAGCTCCGCTTGCTCCGGGCGCTGGCTCTGCTCCGCTTGG
TCTTTCCTGCTTTCGGGGAGCTCCGCTTGTACCGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               340-452, + strand, RNAz p=0.798969

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               340-452, + strand, RNAz p=0.798969

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-554, gnl|bosTau2|chr16 (40177576-40178123)
               

               
               1-554, gnl|Hg17|chr1 (13850797-13850217)
               

               
               1-554, gnl|Mm7|chr4 (142547959-142548530)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-554, gnl|bosTau2|chr16 (40177576-40178123)
               

               
               1-554, gnl|Hg17|chr1 (13850797-13850217)
               

               
               1-554, gnl|Mm7|chr4 (142547959-142548530)

	1-554, gnl\|bosTau2\|chr16 (40177576-40178123)
	1-554, gnl\|Hg17\|chr1 (13850797-13850217)
	1-554, gnl\|Mm7\|chr4 (142547959-142548530)