Ss1.1-Mixc-0043,j03.5
|
GCTTCAGATCCAGGAACAACTCGGTCGCGGAAGCAACGGCAGCCCCTCTCCTCCAGCAAA
GGGCAGCGGGCAGACAGACCCACAGACACACACGGACGGAGAGCCTGGGACTGGATGCCC
TCCGCCCCCAGCCGCTCGGCCAGGCCTGGCCCCATGGCCTTCAATGACCTCCTGCTGCAG
GTGGGGGGAGTCGGCCGCTTCCAGCAGATCCAGGTCACTCTGGTGGTTCTCCCCCTGCTC
CTCATGGCCTCCCACAACACCCTGCAGAACTTCACGGCCGCCATCCCCGCCCACCACTGC
CGCCCACCTGCTGACACCAACCTCAGCAGGGACACGGAGCTGGAGGCCTGGCTGCCCCGG
GACGGCCAGGGGCGGCCTGCATCCTGTCTCCGCTTCACGTCCCCCCAGCGGGGGCCGCCC
TTTCCCAATGGCACAGGGACCAACGGCACGGGGACCACGGAGCCCTGTACCAATGGCTGG
ATCTATGACCCCGGCACCTTCCCTTCCACCATCGTGACTGAGTGGGACCTCGTGTGCTCT
CGCAGGGCCTTACGCCAGCTGGCCCAGTCCCTGTACATGGTGGGGGTGCTTCTCGGAGCC
ATGATATTCGGGTACCTGGCAGACAGGCTGGGCCGCCGGAAGGTGCTGATCTTGAACTAC
CTGCAGACGGCTGATAGGCTACGTTGCGCTGCCTTCGCCCCCAACTTCCCCGTCTACTGT
GCCTTCCGGCTCCCGCTGGCGCCATCGTTGGCTGGCATCTCCCTCAGCCTTTTTTGCCTT
AATGTGGAGTGGATGCCCATCCAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTTCAGATCCAGGAACAACTCGGTCGCGGAAGCAACGGCAGCCCCTCTCCTCCAGCAAA
GGGCAGCGGGCAGACAGACCCACAGACACACACGGACGGAGAGCCTGGGACTGGATGCCC
TCCGCCCCCAGCCGCTCGGCCAGGCCTGGCCCCATGGCCTTCAATGACCTCCTGCTGCAG
GTGGGGGGAGTCGGCCGCTTCCAGCAGATCCAGGTCACTCTGGTGGTTCTCCCCCTGCTC
CTCATGGCCTCCCACAACACCCTGCAGAACTTCACGGCCGCCATCCCCGCCCACCACTGC
CGCCCACCTGCTGACACCAACCTCAGCAGGGACACGGAGCTGGAGGCCTGGCTGCCCCGG
GACGGCCAGGGGCGGCCTGCATCCTGTCTCCGCTTCACGTCCCCCCAGCGGGGGCCGCCC
TTTCCCAATGGCACAGGGACCAACGGCACGGGGACCACGGAGCCCTGTACCAATGGCTGG
ATCTATGACCCCGGCACCTTCCCTTCCACCATCGTGACTGAGTGGGACCTCGTGTGCTCT
CGCAGGGCCTTACGCCAGCTGGCCCAGTCCCTGTACATGGTGGGGGTGCTTCTCGGAGCC
ATGATATTCGGGTACCTGGCAGACAGGCTGGGCCGCCGGAAGGTGCTGATCTTGAACTAC
CTGCAGACGGCTGATAGGCTACGTTGCGCTGCCTTCGCCCCCAACTTCCCCGTCTACTGT
GCCTTCCGGCTCCCGCTGGCGCCATCGTTGGCTGGCATCTCCCTCAGCCTTTTTTGCCTT
AATGTGGAGTGGATGCCCATCCAC
|
|
gi|6561269|gb|AAF16872.1| |
Protein identifier
|
gi|6561269|gb|AAF16872.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-522, gnl|bosTau2|chr13 (21486737-21486227) |
|
3-522, gnl|Hg17|chr11 (62508875-62508370) |
|
3-522, gnl|Mm7|chr19 (8298325-8298808) |
| |
|
622-733, gnl|bosTau2|chr13 (21485600-21485489) |
|
622-733, gnl|canFam2|chr18 (56765072-56764881) |
|
622-733, gnl|danRer3|chrNA (32443598-32443768) |
|
622-733, gnl|dasNov1|scaffold_48104 (7591-7772) |
|
622-733, gnl|echTel1|scaffold_175161 (3806-3984) |
|
622-733, gnl|fr1|chrUn (189596306-189596503) |
|
622-733, gnl|hg17|chr11 (62507572-62507762) |
|
622-733, gnl|Hg17|chr11 (62507744-62507633) |
|
622-733, gnl|loxAfr1|scaffold_31228 (7831-7641) |
|
622-733, gnl|mm7|chr19 (8299646-8299457) |
|
622-733, gnl|Mm7|chr19 (8299472-8299583) |
|
622-733, gnl|monDom2|scaffold_150 (1270664-1270832) |
|
622-733, gnl|oryCun1|scaffold_213297 (34231-34038) |
|
622-733, gnl|panTro1|chr9 (63502156-63502346) |
|
622-733, gnl|rheMac2|chr14 (11102058-11101868) |
|
622-733, gnl|rn3|chr1 (211453909-211453720) |
|
622-733, gnl|tetNig1|chr7 (3917750-3917590) |
|
622-733, gnl|xenTro1|scaffold_251 (1319651-1319491) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-522, gnl|bosTau2|chr13 (21486737-21486227) |
|
3-522, gnl|Hg17|chr11 (62508875-62508370) |
|
3-522, gnl|Mm7|chr19 (8298325-8298808) |
| |
|
622-733, gnl|bosTau2|chr13 (21485600-21485489) |
|
622-733, gnl|canFam2|chr18 (56765072-56764881) |
|
622-733, gnl|danRer3|chrNA (32443598-32443768) |
|
622-733, gnl|dasNov1|scaffold_48104 (7591-7772) |
|
622-733, gnl|echTel1|scaffold_175161 (3806-3984) |
|
622-733, gnl|fr1|chrUn (189596306-189596503) |
|
622-733, gnl|hg17|chr11 (62507572-62507762) |
|
622-733, gnl|Hg17|chr11 (62507744-62507633) |
|
622-733, gnl|loxAfr1|scaffold_31228 (7831-7641) |
|
622-733, gnl|mm7|chr19 (8299646-8299457) |
|
622-733, gnl|Mm7|chr19 (8299472-8299583) |
|
622-733, gnl|monDom2|scaffold_150 (1270664-1270832) |
|
622-733, gnl|oryCun1|scaffold_213297 (34231-34038) |
|
622-733, gnl|panTro1|chr9 (63502156-63502346) |
|
622-733, gnl|rheMac2|chr14 (11102058-11101868) |
|
622-733, gnl|rn3|chr1 (211453909-211453720) |
|
622-733, gnl|tetNig1|chr7 (3917750-3917590) |
|
622-733, gnl|xenTro1|scaffold_251 (1319651-1319491) |
