Non-Coding RNA Search

Ss1.1-Mixc-0043,m24.5

Sequence:


               
               ATAAATTAGAGAATCCATTCACCCCTGTAATGCGAAGTCCAGGTGTGCAACTGGTTTTAG
ACTCATTCTCTTTCTTTTAATGCGTTTCCGTCTCTGCTCAGTGGGGAGATTCACACCTTA
CAGAAGAAAGACACTCTTTCTCCCATGACTTTGGCCGAAAAGTCCCAGGAAGGATCCTGA
TTGCCTGACTTGGGTCACATGCCCCTTCGTTATCCAATCATAGTAGTTCAAGGATGGGGC
TCTCTGGTCAGCTCTGACTCCCATGTTCATCCCGTGGGGCCCCACTCCTTCAGCCCCGGA
GCCCCCACCCCGCTCCCGCCATGCCCGAGCAGCTCAGCGTTGCCGAGTTCCTGGCCGTCA
CCGCAGAGGACCTCAGCTCCCCGGCAGGGGCTGCCGTCTTCGCCGCCAAGATACCCCGGT
GCCGGGGGGCAGCATTGGCGCGGGAGGAGATCCTGGAAGGAGACCAGGCCATCCTGCAGA
GGATAAAGAAGGCCGTGCGGGCCATCCACAGCTCCGGCCTCGGCCACGTGGAGAACGAGG
AGCAGTACCGAGAGGCCGTGGAGGCCCTGGGCAACAGCCACCTATCCCAAAACAGTCACG
AGCTGTCCACCGGCTTCCTGAACTTGGCTGTGTTCACCCGTGAGGTAGCCGCGCTCTTCA
AGAACCTGGTTCAGAACCTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGCTGAAGG
GGCAGCTGAGGGACGGGCGACAGGATTCCAAGAAGCAGCTGGAGAAGGCATGGAAGGACT
ACGAAGCCAAAATGGCCAGGCTGGAGAAGGAGAGGAACCGGGCCCGGGTGACAGGAGGGA
GCTCTGGGGAGGTGGCCCAGGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAATTAGAGAATCCATTCACCCCTGTAATGCGAAGTCCAGGTGTGCAACTGGTTTTAG
ACTCATTCTCTTTCTTTTAATGCGTTTCCGTCTCTGCTCAGTGGGGAGATTCACACCTTA
CAGAAGAAAGACACTCTTTCTCCCATGACTTTGGCCGAAAAGTCCCAGGAAGGATCCTGA
TTGCCTGACTTGGGTCACATGCCCCTTCGTTATCCAATCATAGTAGTTCAAGGATGGGGC
TCTCTGGTCAGCTCTGACTCCCATGTTCATCCCGTGGGGCCCCACTCCTTCAGCCCCGGA
GCCCCCACCCCGCTCCCGCCATGCCCGAGCAGCTCAGCGTTGCCGAGTTCCTGGCCGTCA
CCGCAGAGGACCTCAGCTCCCCGGCAGGGGCTGCCGTCTTCGCCGCCAAGATACCCCGGT
GCCGGGGGGCAGCATTGGCGCGGGAGGAGATCCTGGAAGGAGACCAGGCCATCCTGCAGA
GGATAAAGAAGGCCGTGCGGGCCATCCACAGCTCCGGCCTCGGCCACGTGGAGAACGAGG
AGCAGTACCGAGAGGCCGTGGAGGCCCTGGGCAACAGCCACCTATCCCAAAACAGTCACG
AGCTGTCCACCGGCTTCCTGAACTTGGCTGTGTTCACCCGTGAGGTAGCCGCGCTCTTCA
AGAACCTGGTTCAGAACCTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGCTGAAGG
GGCAGCTGAGGGACGGGCGACAGGATTCCAAGAAGCAGCTGGAGAAGGCATGGAAGGACT
ACGAAGCCAAAATGGCCAGGCTGGAGAAGGAGAGGAACCGGGCCCGGGTGACAGGAGGGA
GCTCTGGGGAGGTGGCCCAGGACA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61818225|ref|XP_590669.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61818225|ref|XP_590669.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               270-449, gnl|bosTau2|chr2 (82664608-82664787)
               

               
               270-449, gnl|Hg17|chr1 (23555975-23555804)
               

               
               270-449, gnl|Mm7|chr4 (135584909-135585084)
               


               
               522-670, gnl|bosTau2|chr2 (82688379-82688527)
               

               
               522-670, gnl|Hg17|chr1 (23527826-23527678)
               

               
               522-670, gnl|Mm7|chr4 (135605999-135606147)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               270-449, gnl|bosTau2|chr2 (82664608-82664787)
               

               
               270-449, gnl|Hg17|chr1 (23555975-23555804)
               

               
               270-449, gnl|Mm7|chr4 (135584909-135585084)
               


               
               522-670, gnl|bosTau2|chr2 (82688379-82688527)
               

               
               522-670, gnl|Hg17|chr1 (23527826-23527678)
               

               
               522-670, gnl|Mm7|chr4 (135605999-135606147)

	270-449, gnl\|bosTau2\|chr2 (82664608-82664787)
	270-449, gnl\|Hg17\|chr1 (23555975-23555804)
	270-449, gnl\|Mm7\|chr4 (135584909-135585084)

	522-670, gnl\|bosTau2\|chr2 (82688379-82688527)
	522-670, gnl\|Hg17\|chr1 (23527826-23527678)
	522-670, gnl\|Mm7\|chr4 (135605999-135606147)