Ss1.1-Mixg-0006c11.5
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AGTGCAGGCCATGCCAGGGGCTCCCGTCCCTGGTAGCTGGCCTACCCCACCCCTTCTCCA
GTCTGGGCTGCAGACTCACAAGTGGGGCCCAGAGTTGCCAAGAGAAAGGCCAGACTCTGA
TCCCGGGGGCCAGCCAGCAGCGCTGCTAAGTGGCGGGCAGCTCGTGTGGGTTGGGCCCCA
AAGCCACGGAAGACAGTGTGGTCGCCACGAAGGGCAACACTCACGCCGTGGCACCGCCCC
AGGCGGGCGCACAGCTCTGCGGGCAGCATGCAGCCCTGGGGCGCCACCGTCTCCTCCCGG
AGGTGCACCTCCAACGCAGCCTCCAGTGCCCGGTCCAGCTCGTCCAGATCCTGCTCAAAG
GCCACATGCACCACCAGCTGGGCGCAGCCGCCAGGCCCCTGGCCCTCGTGCTCTCCTTCC
TCTAACCAGGGTGGTTCCAGCAGAGAGAGGGCCAGGGCTCGCTGGAGGGCCACAGCCTCC
TCTCGCTCAGCCACCTGGTCTTGTGGCTCCAGAGACTGGTAAAGAGCCAGCTGCAGGGCG
GCCTCCTCCTCCAGCGGCCCAGGCACCCCCGTGCCTGGGGCCACTGGCCCCTCGCCAGCC
CTGGGAGTCACAGCCTCCTCCTCTTCCTCTTCCTCTGGCCGCCCCTCAGGCTCCTCCTCC
CCCAGCACCAGCGGCAGCCTCTCTTCCCCCTCCAGGCCCTCCAGGGTGGCCAGCAGCTCT
TGGACCTCCTCGAGGCTGACATTCTCCTGGTCACGTCCCGCGTCATCTGGAGGCCCCAGG
GCGCGGGGGTCCACCTCCTCAGGGTCCGTGTGGAGGGCGGCCCTGGCCAGATGCTCTGTC
CCAAAGACACACTGAAACTGAGCCTCCAACCCACGGAGGAGGTGCTGCCCCTCTGGGCTC
AGCAGGAACCCGGCACTGCCTGGGTGCTTCAGGCTCAGCACATGACAGCTGATGCTGCCA
AGCAGACTTTGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGTGCAGGCCATGCCAGGGGCTCCCGTCCCTGGTAGCTGGCCTACCCCACCCCTTCTCCA
GTCTGGGCTGCAGACTCACAAGTGGGGCCCAGAGTTGCCAAGAGAAAGGCCAGACTCTGA
TCCCGGGGGCCAGCCAGCAGCGCTGCTAAGTGGCGGGCAGCTCGTGTGGGTTGGGCCCCA
AAGCCACGGAAGACAGTGTGGTCGCCACGAAGGGCAACACTCACGCCGTGGCACCGCCCC
AGGCGGGCGCACAGCTCTGCGGGCAGCATGCAGCCCTGGGGCGCCACCGTCTCCTCCCGG
AGGTGCACCTCCAACGCAGCCTCCAGTGCCCGGTCCAGCTCGTCCAGATCCTGCTCAAAG
GCCACATGCACCACCAGCTGGGCGCAGCCGCCAGGCCCCTGGCCCTCGTGCTCTCCTTCC
TCTAACCAGGGTGGTTCCAGCAGAGAGAGGGCCAGGGCTCGCTGGAGGGCCACAGCCTCC
TCTCGCTCAGCCACCTGGTCTTGTGGCTCCAGAGACTGGTAAAGAGCCAGCTGCAGGGCG
GCCTCCTCCTCCAGCGGCCCAGGCACCCCCGTGCCTGGGGCCACTGGCCCCTCGCCAGCC
CTGGGAGTCACAGCCTCCTCCTCTTCCTCTTCCTCTGGCCGCCCCTCAGGCTCCTCCTCC
CCCAGCACCAGCGGCAGCCTCTCTTCCCCCTCCAGGCCCTCCAGGGTGGCCAGCAGCTCT
TGGACCTCCTCGAGGCTGACATTCTCCTGGTCACGTCCCGCGTCATCTGGAGGCCCCAGG
GCGCGGGGGTCCACCTCCTCAGGGTCCGTGTGGAGGGCGGCCCTGGCCAGATGCTCTGTC
CCAAAGACACACTGAAACTGAGCCTCCAACCCACGGAGGAGGTGCTGCCCCTCTGGGCTC
AGCAGGAACCCGGCACTGCCTGGGTGCTTCAGGCTCAGCACATGACAGCTGATGCTGCCA
AGCAGACTTTGC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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435-502, + strand, RNAmicro p=0.999785 |
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396-717, - strand, RNAmicro p=0.995975 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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435-502, + strand, RNAmicro p=0.999785 |
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396-717, - strand, RNAmicro p=0.995975 |
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66-731, gnl|bosTau2|chr14 (236376-235720) |
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66-731, gnl|Hg17|chr8 (145129309-145129968) |
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66-731, gnl|Mm7|chr15 (76322825-76323484) |
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789-972, gnl|bosTau2|chr14 (235323-235140) |
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789-972, gnl|fr1|chrUn (21061121-21061422) |
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789-972, gnl|hg17|chr8 (145130297-145130615) |
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789-972, gnl|Hg17|chr8 (145130360-145130543) |
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789-972, gnl|mm7|chr15 (76323808-76324125) |
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789-972, gnl|Mm7|chr15 (76323872-76324055) |
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789-972, gnl|monDom2|scaffold_79 (2033558-2033858) |
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789-972, gnl|rn3|chr7 (114305282-114305593) |
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789-972, gnl|xenTro1|scaffold_1830 (43297-43641) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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66-731, gnl|bosTau2|chr14 (236376-235720) |
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66-731, gnl|Hg17|chr8 (145129309-145129968) |
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66-731, gnl|Mm7|chr15 (76322825-76323484) |
| |
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789-972, gnl|bosTau2|chr14 (235323-235140) |
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789-972, gnl|fr1|chrUn (21061121-21061422) |
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789-972, gnl|hg17|chr8 (145130297-145130615) |
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789-972, gnl|Hg17|chr8 (145130360-145130543) |
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789-972, gnl|mm7|chr15 (76323808-76324125) |
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789-972, gnl|Mm7|chr15 (76323872-76324055) |
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789-972, gnl|monDom2|scaffold_79 (2033558-2033858) |
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789-972, gnl|rn3|chr7 (114305282-114305593) |
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789-972, gnl|xenTro1|scaffold_1830 (43297-43641) |
