Ss1.1-Mixg-0006e05.3
|
GCACAGTAGCTGGAACTGCAGCCTTTCAGAACAGCTGAGATGTGCACAGCAATCATGAGG
TAAGACTCTCCTCTGATTGTGCTGAAAATGTCTAATCAAGATTGTCGGGGAAAGCAAGAC
CTAAATAGTCATGTACCTAAAAGTGAGACCACAAAGAACTCCTTGGAGAGCTGCCTACAG
CAACTAAAATGCCATTTCACCTGGAACTTGGTAGAGGGAGAAAGTTCCTTGGATGATTTT
GAAGACAGAGTGTGTAACAAGACTGAGTTTCAGAACAGCGAATTTAAAGCCACGATGTGC
AACATACAGGCCTACATAAAAGACTGCAGGGGCCAGCATGAGGCCGCCCTGGAATGCTTA
CGGCAAGCTGAAGAGTTCATCCGGCGAGAACACGCTAGCCAGGCAGAAATCAGAAGCCTG
GTCACCTGGGGAAACTATGCCTGGGTCTACTATCACCTGGGAAGACTTGCAGAAGCTCAG
ATTTATGTAGACAAGGTGAAACAAGTTTGCAAGAAGTTTTCCAGCCCCTACAGAATTGAG
AGGTCTGAGATGGACTGTGAGGAAGGGTGGACCCGGCTCAAGTGTGGAGGAAACCAAAAT
GAAAGGGCAAAGATGTGTTTTCAGAAGGCTCTGGCAAAGAGCCCTAAGGACCCAGAAGTC
ACCTCTGGTCTGGCCATCGCAAGCTACCGTCTGGATAACTGGCCACCTCCTCGGAATTCC
ATTGACCCTCTGAGGCAAGCTGTTCGCCTGAATCCTGACAACCAATATGTCAAAGTCCTC
TTGGCTATGAAACTTCGAAAGATGAATGAAGCAAATGAAGGAGAGAGGTTAGTTGAAGAA
GCTTTGAAGAAAGCGCCGTTTGCAACAGATGTGCTTCGCAGGGCAGCAAAGCTGTATCGC
AGTAAAGGTGACCTGGACCAAGCTATAGAACTCCTTAGACAGGCTCTAAAATTCATGCCA
AATAATGCCCACCTACATTTCCATATTGGGTCCTGCTATAGGGCCAAAGTCCTCGAAACG
CAGAAGACGGCAGAGAATGAAATGTGTGGGAAAAGAGAGAAGTTACAGGAACTAATAGGA
CACGCTCTCCATCATTTAAGGAGAGCTGAAAAGATCAATGGAAATTTGTTCCTTGTCTGC
TCCTATCTCGCCTGCCTCTGTGTGCAAGCTGGTCAGTATGAAGAAGCAGAGTATTACTTT
CAAAAAGAATTCAGCAAAGAGCTTCCTCCTGTAGCCAAACAAGTGCTCCATCTGCGATAC
GGCAACTTTCAGTTGTATAATATGAAGTGTGAAGAAAAGGCCATCCACCATTTTGTAGAG
GGTGTGAAAATAAACCAGGAATCAAAGGAGAGCGAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCACAGTAGCTGGAACTGCAGCCTTTCAGAACAGCTGAGATGTGCACAGCAATCATGAGG
TAAGACTCTCCTCTGATTGTGCTGAAAATGTCTAATCAAGATTGTCGGGGAAAGCAAGAC
CTAAATAGTCATGTACCTAAAAGTGAGACCACAAAGAACTCCTTGGAGAGCTGCCTACAG
CAACTAAAATGCCATTTCACCTGGAACTTGGTAGAGGGAGAAAGTTCCTTGGATGATTTT
GAAGACAGAGTGTGTAACAAGACTGAGTTTCAGAACAGCGAATTTAAAGCCACGATGTGC
AACATACAGGCCTACATAAAAGACTGCAGGGGCCAGCATGAGGCCGCCCTGGAATGCTTA
CGGCAAGCTGAAGAGTTCATCCGGCGAGAACACGCTAGCCAGGCAGAAATCAGAAGCCTG
GTCACCTGGGGAAACTATGCCTGGGTCTACTATCACCTGGGAAGACTTGCAGAAGCTCAG
ATTTATGTAGACAAGGTGAAACAAGTTTGCAAGAAGTTTTCCAGCCCCTACAGAATTGAG
AGGTCTGAGATGGACTGTGAGGAAGGGTGGACCCGGCTCAAGTGTGGAGGAAACCAAAAT
GAAAGGGCAAAGATGTGTTTTCAGAAGGCTCTGGCAAAGAGCCCTAAGGACCCAGAAGTC
ACCTCTGGTCTGGCCATCGCAAGCTACCGTCTGGATAACTGGCCACCTCCTCGGAATTCC
ATTGACCCTCTGAGGCAAGCTGTTCGCCTGAATCCTGACAACCAATATGTCAAAGTCCTC
TTGGCTATGAAACTTCGAAAGATGAATGAAGCAAATGAAGGAGAGAGGTTAGTTGAAGAA
GCTTTGAAGAAAGCGCCGTTTGCAACAGATGTGCTTCGCAGGGCAGCAAAGCTGTATCGC
AGTAAAGGTGACCTGGACCAAGCTATAGAACTCCTTAGACAGGCTCTAAAATTCATGCCA
AATAATGCCCACCTACATTTCCATATTGGGTCCTGCTATAGGGCCAAAGTCCTCGAAACG
CAGAAGACGGCAGAGAATGAAATGTGTGGGAAAAGAGAGAAGTTACAGGAACTAATAGGA
CACGCTCTCCATCATTTAAGGAGAGCTGAAAAGATCAATGGAAATTTGTTCCTTGTCTGC
TCCTATCTCGCCTGCCTCTGTGTGCAAGCTGGTCAGTATGAAGAAGCAGAGTATTACTTT
CAAAAAGAATTCAGCAAAGAGCTTCCTCCTGTAGCCAAACAAGTGCTCCATCTGCGATAC
GGCAACTTTCAGTTGTATAATATGAAGTGTGAAGAAAAGGCCATCCACCATTTTGTAGAG
GGTGTGAAAATAAACCAGGAATCAAAGGAGAGCGAA
|
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gi|55958474|emb|CAI12238.1| |
Protein identifier
|
gi|55958474|emb|CAI12238.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
142-1356, gnl|bosTau2|chr26 (7344567-7343368) |
|
142-1356, gnl|canFam2|chr4 (3068320-3069210) |
|
142-1356, gnl|danRer3|chr12 (9735093-9735980) |
|
142-1356, gnl|dasNov1|scaffold_22359 (43972-43082) |
|
142-1356, gnl|echTel1|scaffold_278629 (6825-7715) |
|
142-1356, gnl|galGal2|chr6 (18517310-18518188) |
|
142-1356, gnl|hg17|chr10 (91055688-91056590) |
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142-1356, gnl|Hg17|chr10 (91055697-91056920) |
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142-1356, gnl|loxAfr1|scaffold_11031 (59643-58753) |
|
142-1356, gnl|mm7|chr19 (34274360-34275247) |
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142-1356, gnl|Mm7|chr19 (34274369-34275580) |
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142-1356, gnl|monDom2|scaffold_14 (33556544-33555639) |
|
142-1356, gnl|oryCun1|scaffold_142699 (575-1452) |
|
142-1356, gnl|panTro1|chr8 (92751806-92752708) |
|
142-1356, gnl|rheMac2|chr9 (88884880-88885782) |
|
142-1356, gnl|rn3|chr1 (238726478-238727365) |
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142-1356, gnl|xenTro1|scaffold_194 (945163-944253) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
142-1356, gnl|bosTau2|chr26 (7344567-7343368) |
|
142-1356, gnl|canFam2|chr4 (3068320-3069210) |
|
142-1356, gnl|danRer3|chr12 (9735093-9735980) |
|
142-1356, gnl|dasNov1|scaffold_22359 (43972-43082) |
|
142-1356, gnl|echTel1|scaffold_278629 (6825-7715) |
|
142-1356, gnl|galGal2|chr6 (18517310-18518188) |
|
142-1356, gnl|hg17|chr10 (91055688-91056590) |
|
142-1356, gnl|Hg17|chr10 (91055697-91056920) |
|
142-1356, gnl|loxAfr1|scaffold_11031 (59643-58753) |
|
142-1356, gnl|mm7|chr19 (34274360-34275247) |
|
142-1356, gnl|Mm7|chr19 (34274369-34275580) |
|
142-1356, gnl|monDom2|scaffold_14 (33556544-33555639) |
|
142-1356, gnl|oryCun1|scaffold_142699 (575-1452) |
|
142-1356, gnl|panTro1|chr8 (92751806-92752708) |
|
142-1356, gnl|rheMac2|chr9 (88884880-88885782) |
|
142-1356, gnl|rn3|chr1 (238726478-238727365) |
|
142-1356, gnl|xenTro1|scaffold_194 (945163-944253) |
