Ss1.1-Mixg-0006h03.3
|
AAGAAAGTGGGAAGATGATCTCAAAAAGAATAGCTCAATTAATGAAGGATCAACTTATCA
AAAAAGTACCTCAAATCGTGTATGGGCTGAGGATAGTACTGAGAAAGACAAGGACAGTGT
TCCCACCGCCTTGACCGTCCCTGTCGCTCCAGCTGTTGTCAATGCTGCAGCCGCTACCAC
AACCCTGACCACCACTACTTCTGGCACTGTCTCCTCCACCTCGGAGGTCAGGGAGAGACG
CAGATCATACCTCACTCCTGTTAGAGATGAAGAATCTGAATCCCAAAGAAAAGCAAGATC
TAGACAAGCAAGACAGTCTAGAAGATCCACACAGGGGGTGACATTGACTGATCTTCAGGA
AGCCGAAAAAACAATAGGAAGAAGTCGTTCTACCCGAACCAGAGAACAAGAAAATGAAGA
AAAAGAAAAAGAAGAAAAAGAAAAGCAGGATAAGGAGAAGCAAGAAGAAAAGAAAGAATC
AGAAACATCTAGAGAAGATGAATATAAGCAGAAGTACTCCAGAACATTCGATGAGACTTA
CCAGCGCTACAGACCAGCCTCCACTTCCGGTTCAGCCACTCCATCCTCTTCGCTGTCCAC
CATGAGCAGCTCACTCTATGCTTCAAGTCAACTCAACCGGCCGAACAGTCTTGTAGGTAT
AACTTCTGCTTACTCCAGAGGATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGAAAGTGGGAAGATGATCTCAAAAAGAATAGCTCAATTAATGAAGGATCAACTTATCA
AAAAAGTACCTCAAATCGTGTATGGGCTGAGGATAGTACTGAGAAAGACAAGGACAGTGT
TCCCACCGCCTTGACCGTCCCTGTCGCTCCAGCTGTTGTCAATGCTGCAGCCGCTACCAC
AACCCTGACCACCACTACTTCTGGCACTGTCTCCTCCACCTCGGAGGTCAGGGAGAGACG
CAGATCATACCTCACTCCTGTTAGAGATGAAGAATCTGAATCCCAAAGAAAAGCAAGATC
TAGACAAGCAAGACAGTCTAGAAGATCCACACAGGGGGTGACATTGACTGATCTTCAGGA
AGCCGAAAAAACAATAGGAAGAAGTCGTTCTACCCGAACCAGAGAACAAGAAAATGAAGA
AAAAGAAAAAGAAGAAAAAGAAAAGCAGGATAAGGAGAAGCAAGAAGAAAAGAAAGAATC
AGAAACATCTAGAGAAGATGAATATAAGCAGAAGTACTCCAGAACATTCGATGAGACTTA
CCAGCGCTACAGACCAGCCTCCACTTCCGGTTCAGCCACTCCATCCTCTTCGCTGTCCAC
CATGAGCAGCTCACTCTATGCTTCAAGTCAACTCAACCGGCCGAACAGTCTTGTAGGTAT
AACTTCTGCTTACTCCAGAGGATC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
65-243, gnl|bosTau2|chr5 (5505909-5505731) |
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65-243, gnl|canFam2|chr15 (25316870-25317097) |
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65-243, gnl|dasNov1|scaffold_15401 (3640-3867) |
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65-243, gnl|echTel1|scaffold_293247 (5264-5035) |
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65-243, gnl|galGal2|chr1 (36436063-36436291) |
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65-243, gnl|hg17|chr12 (78701839-78702067) |
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65-243, gnl|Hg17|chr12 (78702018-78701840) |
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65-243, gnl|mm7|chr10 (107715981-107715760) |
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65-243, gnl|Mm7|chr10 (107715806-107715978) |
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65-243, gnl|monDom2|scaffold_36 (13208698-13208924) |
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65-243, gnl|oryCun1|scaffold_193971 (830-1057) |
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65-243, gnl|panTro1|chr10 (80276757-80276985) |
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65-243, gnl|rheMac2|chr11 (76784663-76784891) |
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65-243, gnl|rn3|chr7 (46981383-46981153) |
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65-243, gnl|xenTro1|scaffold_19203 (3868-3640) |
| |
|
332-535, gnl|bosTau2|chr5 (5495835-5495638) |
|
332-535, gnl|Hg17|chr12 (78693646-78693443) |
|
332-535, gnl|Mm7|chr10 (107723316-107723519) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
65-243, gnl|bosTau2|chr5 (5505909-5505731) |
|
65-243, gnl|canFam2|chr15 (25316870-25317097) |
|
65-243, gnl|dasNov1|scaffold_15401 (3640-3867) |
|
65-243, gnl|echTel1|scaffold_293247 (5264-5035) |
|
65-243, gnl|galGal2|chr1 (36436063-36436291) |
|
65-243, gnl|hg17|chr12 (78701839-78702067) |
|
65-243, gnl|Hg17|chr12 (78702018-78701840) |
|
65-243, gnl|mm7|chr10 (107715981-107715760) |
|
65-243, gnl|Mm7|chr10 (107715806-107715978) |
|
65-243, gnl|monDom2|scaffold_36 (13208698-13208924) |
|
65-243, gnl|oryCun1|scaffold_193971 (830-1057) |
|
65-243, gnl|panTro1|chr10 (80276757-80276985) |
|
65-243, gnl|rheMac2|chr11 (76784663-76784891) |
|
65-243, gnl|rn3|chr7 (46981383-46981153) |
|
65-243, gnl|xenTro1|scaffold_19203 (3868-3640) |
| |
|
332-535, gnl|bosTau2|chr5 (5495835-5495638) |
|
332-535, gnl|Hg17|chr12 (78693646-78693443) |
|
332-535, gnl|Mm7|chr10 (107723316-107723519) |
