Ss1.1-Mixg-0007b06.5
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CTGGGCCAGCTAGAATCCCATCTTGGTTCCATCAAGTTCACTTCCTCTGCTTACCTCCTC
CTGGCTCCCAAGAGGACATTCTGTGATTACGCGGGGGGCACTGTGGGGATTCCTGTGTCT
AGCTCACAGGTGTGGACTGAGCATGCTCCCTGCCAGCTCTGTTTCTCATCACCTTTGTAG
CAGGGGCAGGTGCCAGCCACTCAAGAAACTGCTGTGACTTTGGCAGGTCCCTCTCCCATC
TAGTCCCTCTGTGTCTTGGAAGGCCAGCTTGTTCTGTGATTTTTTTGACTGCTTGCCATG
TCTTTGCTGTGTAACCTTGGGGAAATCACCTCACTCTGTGAGCCCATTTCCTTAATCATG
GGGGACCATGCCTACCAAGAAGTTGTGAAGATTTACAAAGAAGCTATGAGTGAAGGATCA
TGTCTGTTTTAGTCTCACAAATTTCCCAGCAACTGATGCTGCAACTGGCACAAGGCAGTT
AATCCACCAAGTGGATCAATGAGGTGCCTGGTGCATAATAAGTGCTCGACAAGTGGAGCT
TTTTTTCCCCGTGTTTGGCCACTCTACGGCATAGGGATTTCCCGGGCTAGGGACTGGATC
CAAGCTGCAGTTGCAGACCTACGCTGCTGCAGCTGTGGCAACACCTGCTTTAACCCACTG
CCAGGCTGGGGATTGAACCCGCATGCTGGTGCTGCAGAGACACTGCTGATCCCATTGCAT
CACAGCAGGAAATCCAAATGGAGCTTTTGACATTTATCTAACATTCTAGGTTATTGCTGC
TCTGACGGCCGTCTCTGGATGCTGTAGATGGGTCAGGAGCGAAGGACTTTGCTTTTTAAC
CATCTTGGATTTCAGAAGGTGGGACTGCACTCATCAGAGAAGCAAATTTCAAGAGGATGT
TTCTTCCCAAGCACCTTCCCCATAGCTGTCCCTTTTGTCCTCAGCAGCACCGCCCTCCCA
GGGGCCCACCCTGGGAGGTCCCCAGGTGATACCCATTTGATGGGGCCCATCTTCTAGAAT
CTTCTCTTGGAATGAGTCCCAAGCCAGGAGACAGAGAATGCGGGTTTGACTCTCCATCCT
GCACTTGCTGACTGTGTGCCTCTGGGCAGGGTTCTGTCCCTTTCTGGGCCTCTGTGCAAT
GGAGGGTTAGAGGTAGGAGCTGATGGGTTCTGAGGGCACTGCCATGCTGAGAGAAGGAGA
CATTTCCCTCACGTTCCTTGATCCCAGAAACAGATGTCCATTGGTAACACAGCCTGGGGT
TGGGGGGCGGGGGCCGCTGGTGCTTGTAACTGGAGCTGCCCCACTTGGGAGGTGAGGGAG
GCGGGCATGTTCAAATGACGCTTGATTCAAACACCTGGCTTTTGCCTCTTCCAGGTCCTG
TTTTGAGACCAAGGACCCAACTTTCTCTTTTCCCAATAAAGTGAGCTCTGTTCTCAGTGA |
Blue-coloured subsequences are predicted RNA structures by RNAz
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CTGGGCCAGCTAGAATCCCATCTTGGTTCCATCAAGTTCACTTCCTCTGCTTACCTCCTC
CTGGCTCCCAAGAGGACATTCTGTGATTACGCGGGGGGCACTGTGGGGATTCCTGTGTCT
AGCTCACAGGTGTGGACTGAGCATGCTCCCTGCCAGCTCTGTTTCTCATCACCTTTGTAG
CAGGGGCAGGTGCCAGCCACTCAAGAAACTGCTGTGACTTTGGCAGGTCCCTCTCCCATC
TAGTCCCTCTGTGTCTTGGAAGGCCAGCTTGTTCTGTGATTTTTTTGACTGCTTGCCATG
TCTTTGCTGTGTAACCTTGGGGAAATCACCTCACTCTGTGAGCCCATTTCCTTAATCATG
GGGGACCATGCCTACCAAGAAGTTGTGAAGATTTACAAAGAAGCTATGAGTGAAGGATCA
TGTCTGTTTTAGTCTCACAAATTTCCCAGCAACTGATGCTGCAACTGGCACAAGGCAGTT
AATCCACCAAGTGGATCAATGAGGTGCCTGGTGCATAATAAGTGCTCGACAAGTGGAGCT
TTTTTTCCCCGTGTTTGGCCACTCTACGGCATAGGGATTTCCCGGGCTAGGGACTGGATC
CAAGCTGCAGTTGCAGACCTACGCTGCTGCAGCTGTGGCAACACCTGCTTTAACCCACTG
CCAGGCTGGGGATTGAACCCGCATGCTGGTGCTGCAGAGACACTGCTGATCCCATTGCAT
CACAGCAGGAAATCCAAATGGAGCTTTTGACATTTATCTAACATTCTAGGTTATTGCTGC
TCTGACGGCCGTCTCTGGATGCTGTAGATGGGTCAGGAGCGAAGGACTTTGCTTTTTAAC
CATCTTGGATTTCAGAAGGTGGGACTGCACTCATCAGAGAAGCAAATTTCAAGAGGATGT
TTCTTCCCAAGCACCTTCCCCATAGCTGTCCCTTTTGTCCTCAGCAGCACCGCCCTCCCA
GGGGCCCACCCTGGGAGGTCCCCAGGTGATACCCATTTGATGGGGCCCATCTTCTAGAAT
CTTCTCTTGGAATGAGTCCCAAGCCAGGAGACAGAGAATGCGGGTTTGACTCTCCATCCT
GCACTTGCTGACTGTGTGCCTCTGGGCAGGGTTCTGTCCCTTTCTGGGCCTCTGTGCAAT
GGAGGGTTAGAGGTAGGAGCTGATGGGTTCTGAGGGCACTGCCATGCTGAGAGAAGGAGA
CATTTCCCTCACGTTCCTTGATCCCAGAAACAGATGTCCATTGGTAACACAGCCTGGGGT
TGGGGGGCGGGGGCCGCTGGTGCTTGTAACTGGAGCTGCCCCACTTGGGAGGTGAGGGAG
GCGGGCATGTTCAAATGACGCTTGATTCAAACACCTGGCTTTTGCCTCTTCCAGGTCCTG
TTTTGAGACCAAGGACCCAACTTTCTCTTTTCCCAATAAAGTGAGCTCTGTTCTCAGTGA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-546, gnl|bosTau2|chr2 (77447843-77447299) |
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1-546, gnl|Hg17|chr1 (29016773-29017315) |
| |
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745-941, gnl|bosTau2|chr2 (77447300-77447095) |
| |
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983-1259, gnl|bosTau2|chr2 (77446963-77446700) |
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983-1259, gnl|Hg17|chr1 (29017940-29018195) |
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983-1259, gnl|Mm7|chr4 (131319762-131319496) |
| |
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1280-1439, gnl|bosTau2|chr2 (77446656-77446496) |
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1280-1439, gnl|canFam2|chr2 (74573545-74573182) |
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1280-1439, gnl|dasNov1|scaffold_13520 (833-511) |
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1280-1439, gnl|echTel1|scaffold_226441 (14162-14494) |
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1280-1439, gnl|hg17|chr1 (29018089-29018443) |
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1280-1439, gnl|Hg17|chr1 (29018233-29018389) |
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1280-1439, gnl|mm7|chr4 (131319617-131319242) |
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1280-1439, gnl|Mm7|chr4 (131319444-131319275) |
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1280-1439, gnl|oryCun1|scaffold_157660 (553-149) |
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1280-1439, gnl|panTro1|chr1 (29599362-29599716) |
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1280-1439, gnl|rheMac2|chr1 (31606677-31607033) |
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1280-1439, gnl|rn3|chr5 (150973699-150973295) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-546, gnl|bosTau2|chr2 (77447843-77447299) |
|
1-546, gnl|Hg17|chr1 (29016773-29017315) |
| |
|
745-941, gnl|bosTau2|chr2 (77447300-77447095) |
| |
|
983-1259, gnl|bosTau2|chr2 (77446963-77446700) |
|
983-1259, gnl|Hg17|chr1 (29017940-29018195) |
|
983-1259, gnl|Mm7|chr4 (131319762-131319496) |
| |
|
1280-1439, gnl|bosTau2|chr2 (77446656-77446496) |
|
1280-1439, gnl|canFam2|chr2 (74573545-74573182) |
|
1280-1439, gnl|dasNov1|scaffold_13520 (833-511) |
|
1280-1439, gnl|echTel1|scaffold_226441 (14162-14494) |
|
1280-1439, gnl|hg17|chr1 (29018089-29018443) |
|
1280-1439, gnl|Hg17|chr1 (29018233-29018389) |
|
1280-1439, gnl|mm7|chr4 (131319617-131319242) |
|
1280-1439, gnl|Mm7|chr4 (131319444-131319275) |
|
1280-1439, gnl|oryCun1|scaffold_157660 (553-149) |
|
1280-1439, gnl|panTro1|chr1 (29599362-29599716) |
|
1280-1439, gnl|rheMac2|chr1 (31606677-31607033) |
|
1280-1439, gnl|rn3|chr5 (150973699-150973295) |
