Ss1.1-Mixg-0008g11.5
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TAAAAGAGGCCCAGGCGTCGCTGTTCGCCCCCACCTCCTCCGCATGAGTTCAGAGCATAC
CAGCTCTACACGCTGTACCGGGGCAAGGACGGCAAAGTGATGCAGGCGCCGATAAATGGT
TGTCGATGTGAACCCCTAATCAACAAGCTGGAGAATCAGCTGGAGGCAACTGTGGAGGAG
ATCAAAGCAGAGCAGGTATCAGTTCAGGATAAAATGAACACCAAGCTGGGGCATATGGAG
AGTAAGACCCAGCACCAGATGCGAGTCCTGGACAAGCTGATGGTTGAGCGACTCTCAGCA
GAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGATTCCGAAAAGCACGAGGGA
GAAAAACGACAGATGTCCTTGGTGGATGAATTAAAAACCTGGTGCATGTTAAAGATTCAG
AATCTGGAGTTGAAGCTTTCTGGAGATTTTAGGGCCTCCAGGAGTAAATCCACACCATCC
ACTTGCGAGTCCTCCACAGGTAACGGACATATGGAGACAGCCCTTCCATCCAAAGGGGAT
GAAAACTCCAGGTCATGTTCTCTTTTGCATTTGAAGGCAGTCTGTGCAATGGGGCTGCGG
AAAACTTTGGATTGTAGTGTGAGCTCTGTAGGGGTAGGGACCATACTTTGATCACTTCTG
TGTACACAGTTCCTATATAGTAATAAAGCACTCCTGTTTAAGTGTTCATAAATATTTGAA
GAAGGAATAAAAGAAGTGTTATCAGTGAAAAAGAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TAAAAGAGGCCCAGGCGTCGCTGTTCGCCCCCACCTCCTCCGCATGAGTTCAGAGCATAC
CAGCTCTACACGCTGTACCGGGGCAAGGACGGCAAAGTGATGCAGGCGCCGATAAATGGT
TGTCGATGTGAACCCCTAATCAACAAGCTGGAGAATCAGCTGGAGGCAACTGTGGAGGAG
ATCAAAGCAGAGCAGGTATCAGTTCAGGATAAAATGAACACCAAGCTGGGGCATATGGAG
AGTAAGACCCAGCACCAGATGCGAGTCCTGGACAAGCTGATGGTTGAGCGACTCTCAGCA
GAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGATTCCGAAAAGCACGAGGGA
GAAAAACGACAGATGTCCTTGGTGGATGAATTAAAAACCTGGTGCATGTTAAAGATTCAG
AATCTGGAGTTGAAGCTTTCTGGAGATTTTAGGGCCTCCAGGAGTAAATCCACACCATCC
ACTTGCGAGTCCTCCACAGGTAACGGACATATGGAGACAGCCCTTCCATCCAAAGGGGAT
GAAAACTCCAGGTCATGTTCTCTTTTGCATTTGAAGGCAGTCTGTGCAATGGGGCTGCGG
AAAACTTTGGATTGTAGTGTGAGCTCTGTAGGGGTAGGGACCATACTTTGATCACTTCTG
TGTACACAGTTCCTATATAGTAATAAAGCACTCCTGTTTAAGTGTTCATAAATATTTGAA
GAAGGAATAAAAGAAGTGTTATCAGTGAAAAAGAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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104-257, gnl|bosTau2|chr9 (33389530-33389377) |
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104-257, gnl|canFam2|chr12 (51830776-51830970) |
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104-257, gnl|danRer3|chr20 (1614414-1614231) |
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104-257, gnl|dasNov1|scaffold_1429 (143146-142954) |
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104-257, gnl|echTel1|scaffold_290851 (31072-31264) |
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104-257, gnl|fr1|chrUn (312496457-312496290) |
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104-257, gnl|galGal2|chr3 (73893893-73893713) |
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104-257, gnl|hg17|chr6 (90390951-90391144) |
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104-257, gnl|Hg17|chr6 (90390977-90391130) |
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104-257, gnl|loxAfr1|scaffold_208330 (504-312) |
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104-257, gnl|mm7|chr4 (33093816-33093632) |
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104-257, gnl|Mm7|chr4 (33093794-33093641) |
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104-257, gnl|monDom2|scaffold_0 (138722645-138722453) |
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104-257, gnl|panTro1|chr5 (92101547-92101740) |
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104-257, gnl|rheMac2|chr4 (85485056-85485240) |
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104-257, gnl|rn3|chr5 (49110574-49110396) |
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104-257, gnl|tetNig1|chrUn_random (24501142-24500972) |
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104-257, gnl|xenTro1|scaffold_604 (273367-273553) |
| |
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371-647, gnl|bosTau2|chr9 (33381649-33381373) |
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371-647, gnl|Hg17|chr6 (90395550-90395824) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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104-257, gnl|bosTau2|chr9 (33389530-33389377) |
|
104-257, gnl|canFam2|chr12 (51830776-51830970) |
|
104-257, gnl|danRer3|chr20 (1614414-1614231) |
|
104-257, gnl|dasNov1|scaffold_1429 (143146-142954) |
|
104-257, gnl|echTel1|scaffold_290851 (31072-31264) |
|
104-257, gnl|fr1|chrUn (312496457-312496290) |
|
104-257, gnl|galGal2|chr3 (73893893-73893713) |
|
104-257, gnl|hg17|chr6 (90390951-90391144) |
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104-257, gnl|Hg17|chr6 (90390977-90391130) |
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104-257, gnl|loxAfr1|scaffold_208330 (504-312) |
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104-257, gnl|mm7|chr4 (33093816-33093632) |
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104-257, gnl|Mm7|chr4 (33093794-33093641) |
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104-257, gnl|monDom2|scaffold_0 (138722645-138722453) |
|
104-257, gnl|panTro1|chr5 (92101547-92101740) |
|
104-257, gnl|rheMac2|chr4 (85485056-85485240) |
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104-257, gnl|rn3|chr5 (49110574-49110396) |
|
104-257, gnl|tetNig1|chrUn_random (24501142-24500972) |
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104-257, gnl|xenTro1|scaffold_604 (273367-273553) |
| |
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371-647, gnl|bosTau2|chr9 (33381649-33381373) |
|
371-647, gnl|Hg17|chr6 (90395550-90395824) |
