Non-Coding RNA Search

Ss1.1-Mixg-0009g06.3

Sequence:


               
               TTTTTTTTTTCCCCATCACTGGTCCCACCTGTTCTTAGAACTGAGTGGCCTCTAATGGTT
CTCCCATGAACAGGAAGATCCAGTGTACCTCAGGGTGTCCGCCTTTACACACTGACACAC
TCAGACTCACACTTCATTCGTAGTTTTGAGCTTTGCCTTGCATCAGGGCAGACCAGAGAG
AAACAAGCGGGAAAGAGGCTCCAGGCGGTCCGCAGAGGCTCTGACAGCAGCACATTCTCA
GCAAGGCTGACCAGCTCTGCTGTGCTGCATCCTTCATACTGATGAGCTCAGAGGCAGGTA
TTTGCTCTGAAGCATGTCAGTTAAACGTAGTAATTATTTCTCTTGGAAGGGAAGAAGGCA
GTTAAGTAGCACGTGCTCACTCGCCAACATTATAGCTTGTGCTCCCTGATCACAACAGTA
GATTTGGGCTGATTTCCTATTCTGGGGCAATCAGTGACAGAGGAGAGAGAGCCATTAGCA
GGCTGCCCTAGTTGACCTTCCGTTAAATTATTGTTTCTTTCCCCTCCTGCCTTTCCATCA
GTAGGAGAGAGCAGGAAGTAGACTGGCTCTCCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTCCCCATCACTGGTCCCACCTGTTCTTAGAACTGAGTGGCCTCTAATGGTT
CTCCCATGAACAGGAAGATCCAGTGTACCTCAGGGTGTCCGCCTTTACACACTGACACAC
TCAGACTCACACTTCATTCGTAGTTTTGAGCTTTGCCTTGCATCAGGGCAGACCAGAGAG
AAACAAGCGGGAAAGAGGCTCCAGGCGGTCCGCAGAGGCTCTGACAGCAGCACATTCTCA
GCAAGGCTGACCAGCTCTGCTGTGCTGCATCCTTCATACTGATGAGCTCAGAGGCAGGTA
TTTGCTCTGAAGCATGTCAGTTAAACGTAGTAATTATTTCTCTTGGAAGGGAAGAAGGCA
GTTAAGTAGCACGTGCTCACTCGCCAACATTATAGCTTGTGCTCCCTGATCACAACAGTA
GATTTGGGCTGATTTCCTATTCTGGGGCAATCAGTGACAGAGGAGAGAGAGCCATTAGCA
GGCTGCCCTAGTTGACCTTCCGTTAAATTATTGTTTCTTTCCCCTCCTGCCTTTCCATCA
GTAGGAGAGAGCAGGAAGTAGACTGGCTCTCCATTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               424-575, + strand, RNAz p=0.995921

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               424-575, + strand, RNAz p=0.995921

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               2-575, gnl|bosTau2|chr9 (50171152-50170584)
               

               
               2-575, gnl|Hg17|chr6 (148509825-148510402)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-575, gnl|bosTau2|chr9 (50171152-50170584)
               

               
               2-575, gnl|Hg17|chr6 (148509825-148510402)

	2-575, gnl\|bosTau2\|chr9 (50171152-50170584)
	2-575, gnl\|Hg17\|chr6 (148509825-148510402)