Ss1.1-Mixn-0001f17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGCTCGCATGCATGAGCGCATCGACAAACAATATCAAGACGCCGTCCGAGCCCACAAG GCTGGCCGAACTGTGGACGTGGCGGATCTGCCTGTGCCTCCACGCTTTCCCCCAATCCAG GGCCTGGAGGCCACGGAGCCCACCCAACATATCCTGGTGGGGGTCCTATAAACTGCCATG AAGCTGGCCAACCAGGATGAAGGCGCAAAGGATGAAGAGGATGAGGAGCCAAAGAAGCAA CTCAACAGCCCTGCAGCCCCCACAGCCCAGCCCAAAGCCCCACCCTCAAGGACAGGCCAG TCAGGATCTACCCCAGCAGCCAAAGCAGCCCCCAAAGCCACATCCACCAGAGCCCAGCAG CAGCTGGCCTTCTTGGAGGGCCGCAAGAAGCAGCTTCTGCAGGCTGCACTGCGAGCCAAG CAGAAGAATGACGTGGAGGGCGCCAAGATGCACCTGCGCCAGGCCAAGGGGCTGGAGCCC ATGCTGGAGGCCTCACGCAATGGGCTGCCTGTGGACATTGCCAAGGTGCCGCCCGCTCCC GTCAACAAGGATGACTTTGCCCTGGTCCAGCGGCCTGGCCCAGGTCTGTCCCAGGAGTCT GCCCGTCGCTACGGTGAACTCACCAAGCTCCTAAGGCAGCAGCACGAGATGTGCCTGAAC CACTCTAAGCAGTTCACGCACCTGGGCAACATCGCTGAAACCAGCAAATTTGAGAAGCTG GCAGAGGACTGTAAGCGGAGCATGGAGACTTTGAAGCAGGCATTTGCCCGGGGTCTCCCC ACGCCCGCTGCTCGCTTTGAGCAGAGAACCTTCAGTGTCATCAAGATCTTCCCCGACCTC AGCAGCAATGACATGCTCCTGTTCATCGTGAAGGGCGCATCAACCTGCCCACACCCCAAG GGCTGTCCCCTGGTGACCTGGATGTCTTTGTTCGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGCTCGCATGCATGAGCGCATCGACAAACAATATCAAGACGCCGTCCGAGCCCACAAG GCTGGCCGAACTGTGGACGTGGCGGATCTGCCTGTGCCTCCACGCTTTCCCCCAATCCAG GGCCTGGAGGCCACGGAGCCCACCCAACATATCCTGGTGGGGGTCCTATAAACTGCCATG AAGCTGGCCAACCAGGATGAAGGCGCAAAGGATGAAGAGGATGAGGAGCCAAAGAAGCAA CTCAACAGCCCTGCAGCCCCCACAGCCCAGCCCAAAGCCCCACCCTCAAGGACAGGCCAG TCAGGATCTACCCCAGCAGCCAAAGCAGCCCCCAAAGCCACATCCACCAGAGCCCAGCAG CAGCTGGCCTTCTTGGAGGGCCGCAAGAAGCAGCTTCTGCAGGCTGCACTGCGAGCCAAG CAGAAGAATGACGTGGAGGGCGCCAAGATGCACCTGCGCCAGGCCAAGGGGCTGGAGCCC ATGCTGGAGGCCTCACGCAATGGGCTGCCTGTGGACATTGCCAAGGTGCCGCCCGCTCCC GTCAACAAGGATGACTTTGCCCTGGTCCAGCGGCCTGGCCCAGGTCTGTCCCAGGAGTCT GCCCGTCGCTACGGTGAACTCACCAAGCTCCTAAGGCAGCAGCACGAGATGTGCCTGAAC CACTCTAAGCAGTTCACGCACCTGGGCAACATCGCTGAAACCAGCAAATTTGAGAAGCTG GCAGAGGACTGTAAGCGGAGCATGGAGACTTTGAAGCAGGCATTTGCCCGGGGTCTCCCC ACGCCCGCTGCTCGCTTTGAGCAGAGAACCTTCAGTGTCATCAAGATCTTCCCCGACCTC AGCAGCAATGACATGCTCCTGTTCATCGTGAAGGGCGCATCAACCTGCCCACACCCCAAG GGCTGTCCCCTGGTGACCTGGATGTCTTTGTTCGGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 96-825, - strand, RNAz p=0.774157 | |
| 96-197, - strand, RNAz p=0.52471 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 96-825, - strand, RNAz p=0.774157 | |
| 96-197, - strand, RNAz p=0.52471 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 96-237, gnl|bosTau2|chr7 (7887028-7886886) | |
| 96-237, gnl|canFam2|chr20 (51556953-51556789) | |
| 96-237, gnl|danRer3|chr2 (9773106-9773243) | |
| 96-237, gnl|dasNov1|scaffold_56682 (1403-1239) | |
| 96-237, gnl|echTel1|scaffold_314937 (7776-7603) | |
| 96-237, gnl|fr1|chrUn (148434348-148434233) | |
| 96-237, gnl|hg17|chr19 (13891615-13891784) | |
| 96-237, gnl|Hg17|chr19 (13891622-13891764) | |
| 96-237, gnl|loxAfr1|scaffold_14073 (55082-55251) | |
| 96-237, gnl|mm7|chr8 (82721823-82721661) | |
| 96-237, gnl|Mm7|chr8 (82721816-82721674) | |
| 96-237, gnl|monDom2|scaffold_159 (1180189-1180346) | |
| 96-237, gnl|panTro1|chr20 (14523510-14523679) | |
| 96-237, gnl|rheMac2|chr19 (13607739-13607908) | |
| 96-237, gnl|rn3|chr19 (25709140-25709302) | |
| 96-237, gnl|tetNig1|chr18 (2083654-2083542) | |
| 96-237, gnl|xenTro1|scaffold_781 (15229-15358) | |
| 347-528, gnl|bosTau2|chr7 (7886328-7886147) | |
| 347-528, gnl|Hg17|chr19 (13892557-13892738) | |
| 347-528, gnl|Mm7|chr8 (82721023-82720842) | |
| 704-825, gnl|bosTau2|chr7 (7885073-7884952) | |
| 704-825, gnl|Hg17|chr19 (13895504-13895625) | |
| 704-825, gnl|Mm7|chr8 (82719243-82719122) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 96-237, gnl|bosTau2|chr7 (7887028-7886886) | |
| 96-237, gnl|canFam2|chr20 (51556953-51556789) | |
| 96-237, gnl|danRer3|chr2 (9773106-9773243) | |
| 96-237, gnl|dasNov1|scaffold_56682 (1403-1239) | |
| 96-237, gnl|echTel1|scaffold_314937 (7776-7603) | |
| 96-237, gnl|fr1|chrUn (148434348-148434233) | |
| 96-237, gnl|hg17|chr19 (13891615-13891784) | |
| 96-237, gnl|Hg17|chr19 (13891622-13891764) | |
| 96-237, gnl|loxAfr1|scaffold_14073 (55082-55251) | |
| 96-237, gnl|mm7|chr8 (82721823-82721661) | |
| 96-237, gnl|Mm7|chr8 (82721816-82721674) | |
| 96-237, gnl|monDom2|scaffold_159 (1180189-1180346) | |
| 96-237, gnl|panTro1|chr20 (14523510-14523679) | |
| 96-237, gnl|rheMac2|chr19 (13607739-13607908) | |
| 96-237, gnl|rn3|chr19 (25709140-25709302) | |
| 96-237, gnl|tetNig1|chr18 (2083654-2083542) | |
| 96-237, gnl|xenTro1|scaffold_781 (15229-15358) | |
| 347-528, gnl|bosTau2|chr7 (7886328-7886147) | |
| 347-528, gnl|Hg17|chr19 (13892557-13892738) | |
| 347-528, gnl|Mm7|chr8 (82721023-82720842) | |
| 704-825, gnl|bosTau2|chr7 (7885073-7884952) | |
| 704-825, gnl|Hg17|chr19 (13895504-13895625) | |
| 704-825, gnl|Mm7|chr8 (82719243-82719122) |