Non-Coding RNA Search

Ss1.1-Mixn-0001j03.5

Sequence:


               
               TACACTCCTAAGATTTGCAAATGAATGGAACAGAAATGCCTGTCTGGCCATTCTCATCCA
GCATTTCCATACCATTCTCAGGCCCCATGTACTTGCTGTTGCTCCAGAACACACTCTAAT
TCCCAGTATCTCTCCTTCACTGTAGAATTCAGGAAACTGGGCATCACTGTCTATGGAGGT
GGGGGGTTGCCAGTGTCCTCTGTATTCCCCTCCAAGAGCCAGCTGCTTGTTCTCACAGTT
CTTAGAGCTTTTCTCATAGCTTCTCTCTGGGTAGAAGAGGGTGTCTGGCTGTTTTTTCCT
TAGTTTAACAGCTCTGAGAGATAAGAGCCCAACAGAGAAATACTTACTAGATTGAAGTTA
ATCATGGGACCAGTAGTCACTGCAGCTCCCCATGTTAGGCCTGACATGAAGTGGGGGACT
CAGATGTCCAGCAGGCCAGTGATAGGCCTCAGGACAGCTGCACACACCTTATGGGCTCAG
TGCTTTCTGGGACATTCCCTGTGGGCCAGGCTCCTCAAGGACTTTAAGTCAAATCCTGGC
CAGGGCTGTGAGGTATAGGTAGTAGATCTGCCCCCTTCACAGGTGAGAAACTGAGCCTCA
GAACATTAATCTGGGGCTTTAAACTCTGCTGCCTTTCTGCCATGCTGCCTCTCTGACAAA
TAATCTTCTTGATGCCTCATAGGGACTTCCAAGGAAGATGCCATGAAA------------
CAAGTAGAAGAACTAAAGAAAAATATGGAATATAAGGGACTGGATTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACACTCCTAAGATTTGCAAATGAATGGAACAGAAATGCCTGTCTGGCCATTCTCATCCA
GCATTTCCATACCATTCTCAGGCCCCATGTACTTGCTGTTGCTCCAGAACACACTCTAAT
TCCCAGTATCTCTCCTTCACTGTAGAATTCAGGAAACTGGGCATCACTGTCTATGGAGGT
GGGGGGTTGCCAGTGTCCTCTGTATTCCCCTCCAAGAGCCAGCTGCTTGTTCTCACAGTT
CTTAGAGCTTTTCTCATAGCTTCTCTCTGGGTAGAAGAGGGTGTCTGGCTGTTTTTTCCT
TAGTTTAACAGCTCTGAGAGATAAGAGCCCAACAGAGAAATACTTACTAGATTGAAGTTA
ATCATGGGACCAGTAGTCACTGCAGCTCCCCATGTTAGGCCTGACATGAAGTGGGGGACT
CAGATGTCCAGCAGGCCAGTGATAGGCCTCAGGACAGCTGCACACACCTTATGGGCTCAG
TGCTTTCTGGGACATTCCCTGTGGGCCAGGCTCCTCAAGGACTTTAAGTCAAATCCTGGC
CAGGGCTGTGAGGTATAGGTAGTAGATCTGCCCCCTTCACAGGTGAGAAACTGAGCCTCA
GAACATTAATCTGGGGCTTTAAACTCTGCTGCCTTTCTGCCATGCTGCCTCTCTGACAAA
TAATCTTCTTGATGCCTCATAGGGACTTCCAAGGAAGATGCCATGAAA------------
CAAGTAGAAGAACTAAAGAAAAATATGGAATATAAGGGACTGGATTTG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-366, gnl|bosTau2|chr2 (44426226-44425864)
               

               
               1-366, gnl|Hg17|chr2 (119845280-119845689)
               

               
               1-366, gnl|Mm7|chr1 (119982380-119982017)
               


               
               410-756, gnl|bosTau2|chr2 (44425844-44425484)
               

               
               410-756, gnl|Hg17|chr2 (119845792-119846137)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-366, gnl|bosTau2|chr2 (44426226-44425864)
               

               
               1-366, gnl|Hg17|chr2 (119845280-119845689)
               

               
               1-366, gnl|Mm7|chr1 (119982380-119982017)
               


               
               410-756, gnl|bosTau2|chr2 (44425844-44425484)
               

               
               410-756, gnl|Hg17|chr2 (119845792-119846137)

	1-366, gnl\|bosTau2\|chr2 (44426226-44425864)
	1-366, gnl\|Hg17\|chr2 (119845280-119845689)
	1-366, gnl\|Mm7\|chr1 (119982380-119982017)

	410-756, gnl\|bosTau2\|chr2 (44425844-44425484)
	410-756, gnl\|Hg17\|chr2 (119845792-119846137)