Ss1.1-Mixn-0001j10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGATGCTCAGAATTCCTCTCGCTGCCCTTGGAAGAAGAGCCTGGTCTCCCAGCCTCAG AGTTTGTCCCCCGTTTTCCACCCACCTGTCTTTCGCGATCTCTCAGTGTCTGTCTATCTC TTATTTGCTCTAGTCGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTG CATCTGGTCTGGACTTTAAGAGATGTGTCCGAGGGCTCAGTCCCCAATGGAGACTCCCAG AGTGGCGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTG GAAGCTTTGGATCGGGTCTTTGAGCGTCCTTCCTACCCTGACGTCTTCCAGGCATCAGAG CACATCAAATCAGAACAGGGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGGCTTGAT GAAGTCAAGTCGAGTCTATCTGCATCCACCAACCCCGAGCTGGGCAGCAACGTGTCAGGC ACACAGACATACCCCGTTGTGACCGGTCGTGACATGGCGAGCACCACTCTGCCTGGTTAC CCCCCTCACGTGCCCCCCACTGGCCAGGGAAGCTATCCCACCTCCACCCTGGCAGGAATG GTGCCTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCCCCAGTACACGGCCTACAAC GAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAGTTCCCCTTATTATTATAGTGCCGCC CCCCGGGGCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGATGCTCAGAATTCCTCTCGCTGCCCTTGGAAGAAGAGCCTGGTCTCCCAGCCTCAG AGTTTGTCCCCCGTTTTCCACCCACCTGTCTTTCGCGATCTCTCAGTGTCTGTCTATCTC TTATTTGCTCTAGTCGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTG CATCTGGTCTGGACTTTAAGAGATGTGTCCGAGGGCTCAGTCCCCAATGGAGACTCCCAG AGTGGCGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTG GAAGCTTTGGATCGGGTCTTTGAGCGTCCTTCCTACCCTGACGTCTTCCAGGCATCAGAG CACATCAAATCAGAACAGGGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGGCTTGAT GAAGTCAAGTCGAGTCTATCTGCATCCACCAACCCCGAGCTGGGCAGCAACGTGTCAGGC ACACAGACATACCCCGTTGTGACCGGTCGTGACATGGCGAGCACCACTCTGCCTGGTTAC CCCCCTCACGTGCCCCCCACTGGCCAGGGAAGCTATCCCACCTCCACCCTGGCAGGAATG GTGCCTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCCCCAGTACACGGCCTACAAC GAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAGTTCCCCTTATTATTATAGTGCCGCC CCCCGGGGCTCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 201-319, + strand, RNAz p=0.59477 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 201-319, + strand, RNAz p=0.59477 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 201-382, gnl|bosTau2|chr26 (13227985-13228166) | |
| 201-382, gnl|canFam2|chr28 (16498520-16498707) | |
| 201-382, gnl|danRer3|chr13 (31049478-31049669) | |
| 201-382, gnl|dasNov1|scaffold_124588 (6897-6709) | |
| 201-382, gnl|echTel1|scaffold_268980 (3137-2949) | |
| 201-382, gnl|fr1|chrUn (20156372-20156564) | |
| 201-382, gnl|galGal2|chr6 (16320325-16320137) | |
| 201-382, gnl|hg17|chr10 (102556170-102556358) | |
| 201-382, gnl|Hg17|chr10 (102556175-102556356) | |
| 201-382, gnl|mm7|chr19 (44709774-44709962) | |
| 201-382, gnl|Mm7|chr19 (44709779-44709960) | |
| 201-382, gnl|monDom2|scaffold_45 (101353-101165) | |
| 201-382, gnl|oryCun1|scaffold_208279 (108437-108625) | |
| 201-382, gnl|panTro1|chr8 (104301699-104301887) | |
| 201-382, gnl|rheMac2|chr9 (100414376-100414564) | |
| 201-382, gnl|rn3|chr1 (250135892-250136080) | |
| 201-382, gnl|tetNig1|chr17 (5889025-5889210) | |
| 201-382, gnl|xenTro1|scaffold_186 (1527367-1527555) | |
| 496-608, gnl|bosTau2|chr26 (13244862-13244974) | |
| 496-608, gnl|canFam2|chr28 (16515930-16516102) | |
| 496-608, gnl|danRer3|chr13 (31062871-31063026) | |
| 496-608, gnl|dasNov1|scaffold_110420 (6571-6689) | |
| 496-608, gnl|echTel1|scaffold_288848 (33675-33534) | |
| 496-608, gnl|fr1|chrUn (20164260-20164391) | |
| 496-608, gnl|galGal2|chr6 (16302057-16301914) | |
| 496-608, gnl|hg17|chr10 (102574385-102574557) | |
| 496-608, gnl|Hg17|chr10 (102574385-102574497) | |
| 496-608, gnl|loxAfr1|scaffold_33966 (5048-5203) | |
| 496-608, gnl|mm7|chr19 (44727029-44727201) | |
| 496-608, gnl|Mm7|chr19 (44727029-44727141) | |
| 496-608, gnl|monDom2|scaffold_45 (79530-79384) | |
| 496-608, gnl|oryCun1|scaffold_207216 (36265-36380) | |
| 496-608, gnl|panTro1|chr8 (104319709-104319881) | |
| 496-608, gnl|rheMac2|chr9 (100432122-100432294) | |
| 496-608, gnl|rn3|chr1 (250152873-250153045) | |
| 496-608, gnl|tetNig1|chr17 (5895922-5896035) | |
| 496-608, gnl|xenTro1|scaffold_186 (1538832-1538956) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 201-382, gnl|bosTau2|chr26 (13227985-13228166) | |
| 201-382, gnl|canFam2|chr28 (16498520-16498707) | |
| 201-382, gnl|danRer3|chr13 (31049478-31049669) | |
| 201-382, gnl|dasNov1|scaffold_124588 (6897-6709) | |
| 201-382, gnl|echTel1|scaffold_268980 (3137-2949) | |
| 201-382, gnl|fr1|chrUn (20156372-20156564) | |
| 201-382, gnl|galGal2|chr6 (16320325-16320137) | |
| 201-382, gnl|hg17|chr10 (102556170-102556358) | |
| 201-382, gnl|Hg17|chr10 (102556175-102556356) | |
| 201-382, gnl|mm7|chr19 (44709774-44709962) | |
| 201-382, gnl|Mm7|chr19 (44709779-44709960) | |
| 201-382, gnl|monDom2|scaffold_45 (101353-101165) | |
| 201-382, gnl|oryCun1|scaffold_208279 (108437-108625) | |
| 201-382, gnl|panTro1|chr8 (104301699-104301887) | |
| 201-382, gnl|rheMac2|chr9 (100414376-100414564) | |
| 201-382, gnl|rn3|chr1 (250135892-250136080) | |
| 201-382, gnl|tetNig1|chr17 (5889025-5889210) | |
| 201-382, gnl|xenTro1|scaffold_186 (1527367-1527555) | |
| 496-608, gnl|bosTau2|chr26 (13244862-13244974) | |
| 496-608, gnl|canFam2|chr28 (16515930-16516102) | |
| 496-608, gnl|danRer3|chr13 (31062871-31063026) | |
| 496-608, gnl|dasNov1|scaffold_110420 (6571-6689) | |
| 496-608, gnl|echTel1|scaffold_288848 (33675-33534) | |
| 496-608, gnl|fr1|chrUn (20164260-20164391) | |
| 496-608, gnl|galGal2|chr6 (16302057-16301914) | |
| 496-608, gnl|hg17|chr10 (102574385-102574557) | |
| 496-608, gnl|Hg17|chr10 (102574385-102574497) | |
| 496-608, gnl|loxAfr1|scaffold_33966 (5048-5203) | |
| 496-608, gnl|mm7|chr19 (44727029-44727201) | |
| 496-608, gnl|Mm7|chr19 (44727029-44727141) | |
| 496-608, gnl|monDom2|scaffold_45 (79530-79384) | |
| 496-608, gnl|oryCun1|scaffold_207216 (36265-36380) | |
| 496-608, gnl|panTro1|chr8 (104319709-104319881) | |
| 496-608, gnl|rheMac2|chr9 (100432122-100432294) | |
| 496-608, gnl|rn3|chr1 (250152873-250153045) | |
| 496-608, gnl|tetNig1|chr17 (5895922-5896035) | |
| 496-608, gnl|xenTro1|scaffold_186 (1538832-1538956) |