Non-Coding RNA Search

Ss1.1-Mixn-0001o07.5

Sequence:


               
               TCTTTCCTCTGCAGTGAACATTTCACCAAAGACAGCTCNTCCAAGAGGTGGGAGGACCAG
CACCGCCTGCTGAAGCCCACGGCTGTGCCCTCCATCTTCCACCTGGCGGAGAAGAAGAGG
GGGGCCGGAGGCCATGGCCGCAGCAGGAGAAAGGACGCCAGGAAGGCCTCAGGGAGCCTG
AGGGCACAGGCAGGTGACGCGGACGGGAAGGCAGCGGCAGGGTCGTCATCGTCCTCGAGC
GAAAACCCGATGGCCCAGCCAGAGTCCCGCAAGCTGAAGCGGGCAGCGCTGCAGGGCAGA
CCGGCCCCCAGGGCTGCCCAGGAAGCCGCCAGCCCTGAGGGTCTGGAGCAGGCCCGGCAG
CGCCTGGAAGGGAAACCGGAGGACGGTCCGGCCACAGTGTCTGGCAGCCAGGCAGAATCG
AACGCATCCGCTGTGGATGCTGGCGACGAGCGCGCCACCTCCCCCGATGGGGACGTGGTA
GACAAGAGTGGCATTTCCGTGGATGACTTTACTCCCCCTGGGTCGGGGGCCTGCAGGTTT
ATCGGCTCGCTTCATTCCTACAGTTTCTCCTCCAAGCACACCCGTGAGAGGCCGTCAGTG
CCCCGCGAGCCTGTCGACCGCAAGAGGCCGAAGAGGGACGTGGAGCCTGGCTGCAGTGGG
AGCAGCCTGGGGCCCGACAAGGGCCTGGCACAGAGCCCCCCGAGCTCGTCCCTCACGGCC
ACGCCACAGAAGCCTTCGCAGAGCCCCTCGGCACCCCCAACAGACGTCACCCCAAAGCCG
GCGGCCGAGGCTGTGCAGAGCGAGCACAGCGACGCCAGCCCCATGTCCATAAACGAAGTC
ATCCTGTCGGCGTCAGGGGCCTGCAAGCTCATCGACTCGCTGCACTCCTACTGCTTCTCC
TCCCGCCAGAGCAAGAGCCAGGTGTGCTGCCTGCGCGAGCAGGTGGAGAAGAAGAACGGG
GAGCTGAGGACCCTGCGCCAGAGGGTCAGCCGCGCGGACAGCCAGGTGCGCCAGCTGCGG
GAGAAGCTGGACCAGCTGCGGAGACTGAGCCTCCCCCACCTGGGCAGCCTGCTGCCCCCC
GGCCGCGAGCCCCCCGAGATGAGCCCCGTGCTGGAGCCGCTGTCCTGGATGCTGGGCACC
TGGCTGTCGGACCCGCCGGGAGCCGGGACTTTTCCAACGCTGCAGCCCTTCCGGTACCTG
GAGGAGGCGTGCATCTCACACACCGGCCAGCCCGTGCTGAGCTTCTCGTTCAACGCCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTCCTCTGCAGTGAACATTTCACCAAAGACAGCTCNTCCAAGAGGTGGGAGGACCAG
CACCGCCTGCTGAAGCCCACGGCTGTGCCCTCCATCTTCCACCTGGCGGAGAAGAAGAGG
GGGGCCGGAGGCCATGGCCGCAGCAGGAGAAAGGACGCCAGGAAGGCCTCAGGGAGCCTG
AGGGCACAGGCAGGTGACGCGGACGGGAAGGCAGCGGCAGGGTCGTCATCGTCCTCGAGC
GAAAACCCGATGGCCCAGCCAGAGTCCCGCAAGCTGAAGCGGGCAGCGCTGCAGGGCAGA
CCGGCCCCCAGGGCTGCCCAGGAAGCCGCCAGCCCTGAGGGTCTGGAGCAGGCCCGGCAG
CGCCTGGAAGGGAAACCGGAGGACGGTCCGGCCACAGTGTCTGGCAGCCAGGCAGAATCG
AACGCATCCGCTGTGGATGCTGGCGACGAGCGCGCCACCTCCCCCGATGGGGACGTGGTA
GACAAGAGTGGCATTTCCGTGGATGACTTTACTCCCCCTGGGTCGGGGGCCTGCAGGTTT
ATCGGCTCGCTTCATTCCTACAGTTTCTCCTCCAAGCACACCCGTGAGAGGCCGTCAGTG
CCCCGCGAGCCTGTCGACCGCAAGAGGCCGAAGAGGGACGTGGAGCCTGGCTGCAGTGGG
AGCAGCCTGGGGCCCGACAAGGGCCTGGCACAGAGCCCCCCGAGCTCGTCCCTCACGGCC
ACGCCACAGAAGCCTTCGCAGAGCCCCTCGGCACCCCCAACAGACGTCACCCCAAAGCCG
GCGGCCGAGGCTGTGCAGAGCGAGCACAGCGACGCCAGCCCCATGTCCATAAACGAAGTC
ATCCTGTCGGCGTCAGGGGCCTGCAAGCTCATCGACTCGCTGCACTCCTACTGCTTCTCC
TCCCGCCAGAGCAAGAGCCAGGTGTGCTGCCTGCGCGAGCAGGTGGAGAAGAAGAACGGG
GAGCTGAGGACCCTGCGCCAGAGGGTCAGCCGCGCGGACAGCCAGGTGCGCCAGCTGCGG
GAGAAGCTGGACCAGCTGCGGAGACTGAGCCTCCCCCACCTGGGCAGCCTGCTGCCCCCC
GGCCGCGAGCCCCCCGAGATGAGCCCCGTGCTGGAGCCGCTGTCCTGGATGCTGGGCACC
TGGCTGTCGGACCCGCCGGGAGCCGGGACTTTTCCAACGCTGCAGCCCTTCCGGTACCTG
GAGGAGGCGTGCATCTCACACACCGGCCAGCCCGTGCTGAGCTTCTCGTTCAACGCCTTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|62822369|gb|AAY14918.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62822369|gb|AAY14918.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-1087, gnl|bosTau2|chr12 (33711731-33710627)
               

               
               1-1087, gnl|Hg17|chr2_random (283797-282714)
               

               
               1-1087, gnl|Mm7|chr1 (93658715-93657656)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1087, gnl|bosTau2|chr12 (33711731-33710627)
               

               
               1-1087, gnl|Hg17|chr2_random (283797-282714)
               

               
               1-1087, gnl|Mm7|chr1 (93658715-93657656)

	1-1087, gnl\|bosTau2\|chr12 (33711731-33710627)
	1-1087, gnl\|Hg17\|chr2_random (283797-282714)
	1-1087, gnl\|Mm7\|chr1 (93658715-93657656)