Non-Coding RNA Search

Ss1.1-Mixn-0003i09.5

Sequence:


               
               GAAGGAGGGCTGTGAGCTCATTAACGAGGCGCTGAACCTGTTTAACAACGTGTACGGAGC
CATGCACGTGGAGATCTGCGCCTGCCTGCGCCTCCTCGCCCGCCTCCACTACATCATGGG
TGACTACGCCGAGGTGGGCCTTGTGCACCCTCTGGGCTGCCAGCAGAACCTGGCACTTGG
ACCTGGCACGGGGGGTGGTGAGGGAAGGAGCCTGTGTGTTTTCACCTCCTGGGCAGCAGG
AAGTAGGAGTCCAGGCCTCGAAACCGGAGCCCCTGTTATCCCAGAGGCCTGGTCTGCTGC
CAACCTCCGGAGGAGCAGGTGGAGACTTGGGGCAGTGCCCGTGCCTGTCCGCACCACTGG
AGAGCTGTGTTCTGGGGAGAGCTGCCGTACCCAAGGACAGAGTGGGAGTGATAGCAGGGC
CTCCCTGAGTTCTGACTAGAATACCCAGTGCCTTGCAAGTGCTGTGCAAAGCTCCTGGGA
GTCCGTGCTGTTGCCAGTAGCCATCCTGAGGCCTGGTAGTTGGCCCTGGGGCTTCAAGGG
GCTGTTTCCTGAGCCAGGTGCACTGTATGTGCCCAATGCCCCCTCCAGCCATAGGTCTCT
TGTTTTCTTTTGTCTGCGTGTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGGAGGGCTGTGAGCTCATTAACGAGGCGCTGAACCTGTTTAACAACGTGTACGGAGC
CATGCACGTGGAGATCTGCGCCTGCCTGCGCCTCCTCGCCCGCCTCCACTACATCATGGG
TGACTACGCCGAGGTGGGCCTTGTGCACCCTCTGGGCTGCCAGCAGAACCTGGCACTTGG
ACCTGGCACGGGGGGTGGTGAGGGAAGGAGCCTGTGTGTTTTCACCTCCTGGGCAGCAGG
AAGTAGGAGTCCAGGCCTCGAAACCGGAGCCCCTGTTATCCCAGAGGCCTGGTCTGCTGC
CAACCTCCGGAGGAGCAGGTGGAGACTTGGGGCAGTGCCCGTGCCTGTCCGCACCACTGG
AGAGCTGTGTTCTGGGGAGAGCTGCCGTACCCAAGGACAGAGTGGGAGTGATAGCAGGGC
CTCCCTGAGTTCTGACTAGAATACCCAGTGCCTTGCAAGTGCTGTGCAAAGCTCCTGGGA
GTCCGTGCTGTTGCCAGTAGCCATCCTGAGGCCTGGTAGTTGGCCCTGGGGCTTCAAGGG
GCTGTTTCCTGAGCCAGGTGCACTGTATGTGCCCAATGCCCCCTCCAGCCATAGGTCTCT
TGTTTTCTTTTGTCTGCGTGTGCC

Aligned organism(s): 68 entry(ies)

More info

Aligned organism(s): 68 entry(ies)

Help | Less info


               
               2-156, gnl|bosTau2|chr19 (18159471-18159318)
               

               
               2-156, gnl|canFam2|chr9 (50066940-50066786)
               

               
               2-156, gnl|canFam2|chr9 (50066938-50066785)
               

               
               2-156, gnl|canFam2|chr9 (50066932-50066783)
               

               
               2-156, gnl|canFam2|chr9 (50066956-50066830)
               

               
               2-156, gnl|canFam2|chr9 (50066938-50066785)
               

               
               2-156, gnl|danRer3|chr15 (30727019-30727164)
               

               
               2-156, gnl|danRer3|chr15 (30727020-30727169)
               

               
               2-156, gnl|danRer3|chr15 (30727022-30727164)
               

               
               2-156, gnl|danRer3|chr15 (30727005-30727072)
               

               
               2-156, gnl|danRer3|chr15 (30727016-30727164)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45323-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45325-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45331-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45305-45433)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45326-45478)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933953)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933957)
               

               
               2-156, gnl|fr1|chrUn (84934099-84933953)
               

               
               2-156, gnl|fr1|chrUn (84934105-84934049)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933957)
               

               
               2-156, gnl|hg17|chr12 (36766152-36766300)
               

               
               2-156, gnl|Hg17|chr17 (2544075-2543932)
               

               
               2-156, gnl|hg17|chr17_random (2234467-2234616)
               

               
               2-156, gnl|hg17|chr19 (21441367-21441441)
               

               
               2-156, gnl|hg17|chr3 (75763768-75763920)
               

               
               2-156, gnl|hg17|chr7 (64173853-64173998)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (160-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (158-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (152-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (162-50)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (157-4)
               

               
               2-156, gnl|mm7|chr11 (74747721-74747875)
               

               
               2-156, gnl|mm7|chr11 (74747723-74747879)
               

               
               2-156, gnl|mm7|chr11 (74747729-74747881)
               

               
               2-156, gnl|mm7|chr11 (74747720-74747831)
               

               
               2-156, gnl|mm7|chr11 (74747728-74747872)
               

               
               2-156, gnl|Mm7|chr11 (74747737-74747892)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845660-3845500)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845653-3845500)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845647-3845497)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845661-3845545)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845648-3845499)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32593-32747)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32595-32748)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32601-32750)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32578-32703)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32596-32748)
               

               
               2-156, gnl|panTro1|chr10_random (17148540-17148688)
               

               
               2-156, gnl|panTro1|chr20 (22430697-22430771)
               

               
               2-156, gnl|panTro1|chr6 (65792726-65792872)
               

               
               2-156, gnl|panTro1|chrUn_random (63449755-63449608)
               

               
               2-156, gnl|panTro1|chrUn_random (63449759-63449607)
               

               
               2-156, gnl|rheMac2|chr19 (20732570-20732644)
               

               
               2-156, gnl|rheMac2|chr3 (60336830-60336678)
               

               
               2-156, gnl|rheMac2|chr3 (60336827-60336677)
               

               
               2-156, gnl|rheMac2|chr3 (60336821-60336675)
               

               
               2-156, gnl|rheMac2|chr3 (60336827-60336677)
               

               
               2-156, gnl|rn3|chr10 (61961689-61961843)
               

               
               2-156, gnl|rn3|chr10 (61961691-61961847)
               

               
               2-156, gnl|rn3|chr10 (61961697-61961849)
               

               
               2-156, gnl|rn3|chr10 (61961688-61961799)
               

               
               2-156, gnl|rn3|chr10 (61961692-61961840)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212426)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212425)
               

               
               2-156, gnl|tetNig1|chr10 (10212280-10212429)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212330)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212425)

Aligned organism(s): 68 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-156, gnl|bosTau2|chr19 (18159471-18159318)
               

               
               2-156, gnl|canFam2|chr9 (50066940-50066786)
               

               
               2-156, gnl|canFam2|chr9 (50066938-50066785)
               

               
               2-156, gnl|canFam2|chr9 (50066932-50066783)
               

               
               2-156, gnl|canFam2|chr9 (50066956-50066830)
               

               
               2-156, gnl|canFam2|chr9 (50066938-50066785)
               

               
               2-156, gnl|danRer3|chr15 (30727019-30727164)
               

               
               2-156, gnl|danRer3|chr15 (30727020-30727169)
               

               
               2-156, gnl|danRer3|chr15 (30727022-30727164)
               

               
               2-156, gnl|danRer3|chr15 (30727005-30727072)
               

               
               2-156, gnl|danRer3|chr15 (30727016-30727164)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45323-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45325-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45331-45476)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45305-45433)
               

               
               2-156, gnl|echTel1|scaffold_324307 (45326-45478)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933953)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933957)
               

               
               2-156, gnl|fr1|chrUn (84934099-84933953)
               

               
               2-156, gnl|fr1|chrUn (84934105-84934049)
               

               
               2-156, gnl|fr1|chrUn (84934105-84933957)
               

               
               2-156, gnl|hg17|chr12 (36766152-36766300)
               

               
               2-156, gnl|Hg17|chr17 (2544075-2543932)
               

               
               2-156, gnl|hg17|chr17_random (2234467-2234616)
               

               
               2-156, gnl|hg17|chr19 (21441367-21441441)
               

               
               2-156, gnl|hg17|chr3 (75763768-75763920)
               

               
               2-156, gnl|hg17|chr7 (64173853-64173998)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (160-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (158-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (152-4)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (162-50)
               

               
               2-156, gnl|loxAfr1|scaffold_76836 (157-4)
               

               
               2-156, gnl|mm7|chr11 (74747721-74747875)
               

               
               2-156, gnl|mm7|chr11 (74747723-74747879)
               

               
               2-156, gnl|mm7|chr11 (74747729-74747881)
               

               
               2-156, gnl|mm7|chr11 (74747720-74747831)
               

               
               2-156, gnl|mm7|chr11 (74747728-74747872)
               

               
               2-156, gnl|Mm7|chr11 (74747737-74747892)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845660-3845500)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845653-3845500)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845647-3845497)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845661-3845545)
               

               
               2-156, gnl|monDom2|scaffold_86 (3845648-3845499)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32593-32747)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32595-32748)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32601-32750)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32578-32703)
               

               
               2-156, gnl|oryCun1|scaffold_206134 (32596-32748)
               

               
               2-156, gnl|panTro1|chr10_random (17148540-17148688)
               

               
               2-156, gnl|panTro1|chr20 (22430697-22430771)
               

               
               2-156, gnl|panTro1|chr6 (65792726-65792872)
               

               
               2-156, gnl|panTro1|chrUn_random (63449755-63449608)
               

               
               2-156, gnl|panTro1|chrUn_random (63449759-63449607)
               

               
               2-156, gnl|rheMac2|chr19 (20732570-20732644)
               

               
               2-156, gnl|rheMac2|chr3 (60336830-60336678)
               

               
               2-156, gnl|rheMac2|chr3 (60336827-60336677)
               

               
               2-156, gnl|rheMac2|chr3 (60336821-60336675)
               

               
               2-156, gnl|rheMac2|chr3 (60336827-60336677)
               

               
               2-156, gnl|rn3|chr10 (61961689-61961843)
               

               
               2-156, gnl|rn3|chr10 (61961691-61961847)
               

               
               2-156, gnl|rn3|chr10 (61961697-61961849)
               

               
               2-156, gnl|rn3|chr10 (61961688-61961799)
               

               
               2-156, gnl|rn3|chr10 (61961692-61961840)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212426)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212425)
               

               
               2-156, gnl|tetNig1|chr10 (10212280-10212429)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212330)
               

               
               2-156, gnl|tetNig1|chr10 (10212274-10212425)

	2-156, gnl\|bosTau2\|chr19 (18159471-18159318)
	2-156, gnl\|canFam2\|chr9 (50066940-50066786)
	2-156, gnl\|canFam2\|chr9 (50066938-50066785)
	2-156, gnl\|canFam2\|chr9 (50066932-50066783)
	2-156, gnl\|canFam2\|chr9 (50066956-50066830)
	2-156, gnl\|canFam2\|chr9 (50066938-50066785)
	2-156, gnl\|danRer3\|chr15 (30727019-30727164)
	2-156, gnl\|danRer3\|chr15 (30727020-30727169)
	2-156, gnl\|danRer3\|chr15 (30727022-30727164)
	2-156, gnl\|danRer3\|chr15 (30727005-30727072)
	2-156, gnl\|danRer3\|chr15 (30727016-30727164)
	2-156, gnl\|echTel1\|scaffold_324307 (45323-45476)
	2-156, gnl\|echTel1\|scaffold_324307 (45325-45476)
	2-156, gnl\|echTel1\|scaffold_324307 (45331-45476)
	2-156, gnl\|echTel1\|scaffold_324307 (45305-45433)
	2-156, gnl\|echTel1\|scaffold_324307 (45326-45478)
	2-156, gnl\|fr1\|chrUn (84934105-84933953)
	2-156, gnl\|fr1\|chrUn (84934105-84933957)
	2-156, gnl\|fr1\|chrUn (84934099-84933953)
	2-156, gnl\|fr1\|chrUn (84934105-84934049)
	2-156, gnl\|fr1\|chrUn (84934105-84933957)
	2-156, gnl\|hg17\|chr12 (36766152-36766300)
	2-156, gnl\|Hg17\|chr17 (2544075-2543932)
	2-156, gnl\|hg17\|chr17_random (2234467-2234616)
	2-156, gnl\|hg17\|chr19 (21441367-21441441)
	2-156, gnl\|hg17\|chr3 (75763768-75763920)
	2-156, gnl\|hg17\|chr7 (64173853-64173998)
	2-156, gnl\|loxAfr1\|scaffold_76836 (160-4)
	2-156, gnl\|loxAfr1\|scaffold_76836 (158-4)
	2-156, gnl\|loxAfr1\|scaffold_76836 (152-4)
	2-156, gnl\|loxAfr1\|scaffold_76836 (162-50)
	2-156, gnl\|loxAfr1\|scaffold_76836 (157-4)
	2-156, gnl\|mm7\|chr11 (74747721-74747875)
	2-156, gnl\|mm7\|chr11 (74747723-74747879)
	2-156, gnl\|mm7\|chr11 (74747729-74747881)
	2-156, gnl\|mm7\|chr11 (74747720-74747831)
	2-156, gnl\|mm7\|chr11 (74747728-74747872)
	2-156, gnl\|Mm7\|chr11 (74747737-74747892)
	2-156, gnl\|monDom2\|scaffold_86 (3845660-3845500)
	2-156, gnl\|monDom2\|scaffold_86 (3845653-3845500)
	2-156, gnl\|monDom2\|scaffold_86 (3845647-3845497)
	2-156, gnl\|monDom2\|scaffold_86 (3845661-3845545)
	2-156, gnl\|monDom2\|scaffold_86 (3845648-3845499)
	2-156, gnl\|oryCun1\|scaffold_206134 (32593-32747)
	2-156, gnl\|oryCun1\|scaffold_206134 (32595-32748)
	2-156, gnl\|oryCun1\|scaffold_206134 (32601-32750)
	2-156, gnl\|oryCun1\|scaffold_206134 (32578-32703)
	2-156, gnl\|oryCun1\|scaffold_206134 (32596-32748)
	2-156, gnl\|panTro1\|chr10_random (17148540-17148688)
	2-156, gnl\|panTro1\|chr20 (22430697-22430771)
	2-156, gnl\|panTro1\|chr6 (65792726-65792872)
	2-156, gnl\|panTro1\|chrUn_random (63449755-63449608)
	2-156, gnl\|panTro1\|chrUn_random (63449759-63449607)
	2-156, gnl\|rheMac2\|chr19 (20732570-20732644)
	2-156, gnl\|rheMac2\|chr3 (60336830-60336678)
	2-156, gnl\|rheMac2\|chr3 (60336827-60336677)
	2-156, gnl\|rheMac2\|chr3 (60336821-60336675)
	2-156, gnl\|rheMac2\|chr3 (60336827-60336677)
	2-156, gnl\|rn3\|chr10 (61961689-61961843)
	2-156, gnl\|rn3\|chr10 (61961691-61961847)
	2-156, gnl\|rn3\|chr10 (61961697-61961849)
	2-156, gnl\|rn3\|chr10 (61961688-61961799)
	2-156, gnl\|rn3\|chr10 (61961692-61961840)
	2-156, gnl\|tetNig1\|chr10 (10212274-10212426)
	2-156, gnl\|tetNig1\|chr10 (10212274-10212425)
	2-156, gnl\|tetNig1\|chr10 (10212280-10212429)
	2-156, gnl\|tetNig1\|chr10 (10212274-10212330)
	2-156, gnl\|tetNig1\|chr10 (10212274-10212425)