Ss1.1-Mixn-0005i07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGAGTGGGCTTTCTTCTGGCCCTGCAGCTGCTAAAATCAGGGCTCTGGCCCCAAAGAG GGGAAGCTGGATACTGGGAAGGCAGCTGGAGTCTTTGCCACGGCCTGTGCAGACAGACGT CAGGAGGGCGAATGAGAGGAGCCCGCTGAGGCGGGAGGCTCACCCAGACTCACGGAAGGA TGGGGGGGGCGATCCCCGGAGAACAGGGAGGGTGGGGTGCAGAGGACGGCTGACCACGCG GCGCCAGAGATCACTCTGGACCCTCTGGAGATCGTAGGAGGGGAGATCAGAGCCTCTGAA AACTCCTACTTCTGCCAGGCGGCCAGGCAGCTGGCCTCGGTGCCATCTTCCCAGCTTTGC GTCAAACTGGCGAGTGGCGGTGACCCCACCTATGCCTTCAACATCCGCTTCACTGGGGAG GAGGTCCACGGCACCAGCGGTTCCTTCCGCCACTTCCTGTGGCAGGTGTGCAAAGAGCTG CAGAGCTCCTCACTGTCCCTCCTCCTGCTGTGCCCCAGCTCCGCCGTCAACAAGAACAAG GGGAAGTACATCCTGACCCCAAGCCCCATCACCTACGGGGAGGAGCAGCTGCTGCACTTC CTGGGCCAGTTGCTGGGAATTGCAATTCGAGCAGATGTCCCTCTTCCCCTGGACCTCCTG CCCTCCTTCTGGAAGACGCTGGTAGGGGAGCCCCTGGACCCTGACCAAGACCTGCAGGAA GCAGACATCCTCACCTACAATTATGTCAAGAAATTTGTGAGTATCAATGACGAGATTGAG CTGGAGGCCCTGTGCGCCGAGATCGCCTCCCAGCACCTGGCCACCGAGAGCCCCGACGGG CCCAACAAGCCCTGCTGCCGGTTCACCTACCTGACCATGACGGGCGAGGAGGTGGAGCTG TGCAGCCGCGGCCGGCACATCCCTGTGGCGTGGGAGAACAAGGACATCTACGCGGCCACC ATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAACGTGGAGTGCGTGACGGCCGTACGGGCG GGGCTGGGCTCCATCATCCCCCTGCAGCTGCTCACCACGCTCAGCCCGCTGGAGATGGAG CTGCGGACGTGCGGCCTCCCCTACATCAACCTTGAGTTCCTGAAGGCCACACCATGTACC AGGTGGGGCTGA------------AGCACATCGAGTTCTTCTGGGGGGCACTGGAGATGT TTGCNCAGGAGGAGCTGTGCAAGTTCATCAAGTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGAGTGGGCTTTCTTCTGGCCCTGCAGCTGCTAAAATCAGGGCTCTGGCCCCAAAGAG GGGAAGCTGGATACTGGGAAGGCAGCTGGAGTCTTTGCCACGGCCTGTGCAGACAGACGT CAGGAGGGCGAATGAGAGGAGCCCGCTGAGGCGGGAGGCTCACCCAGACTCACGGAAGGA TGGGGGGGGCGATCCCCGGAGAACAGGGAGGGTGGGGTGCAGAGGACGGCTGACCACGCG GCGCCAGAGATCACTCTGGACCCTCTGGAGATCGTAGGAGGGGAGATCAGAGCCTCTGAA AACTCCTACTTCTGCCAGGCGGCCAGGCAGCTGGCCTCGGTGCCATCTTCCCAGCTTTGC GTCAAACTGGCGAGTGGCGGTGACCCCACCTATGCCTTCAACATCCGCTTCACTGGGGAG GAGGTCCACGGCACCAGCGGTTCCTTCCGCCACTTCCTGTGGCAGGTGTGCAAAGAGCTG CAGAGCTCCTCACTGTCCCTCCTCCTGCTGTGCCCCAGCTCCGCCGTCAACAAGAACAAG GGGAAGTACATCCTGACCCCAAGCCCCATCACCTACGGGGAGGAGCAGCTGCTGCACTTC CTGGGCCAGTTGCTGGGAATTGCAATTCGAGCAGATGTCCCTCTTCCCCTGGACCTCCTG CCCTCCTTCTGGAAGACGCTGGTAGGGGAGCCCCTGGACCCTGACCAAGACCTGCAGGAA GCAGACATCCTCACCTACAATTATGTCAAGAAATTTGTGAGTATCAATGACGAGATTGAG CTGGAGGCCCTGTGCGCCGAGATCGCCTCCCAGCACCTGGCCACCGAGAGCCCCGACGGG CCCAACAAGCCCTGCTGCCGGTTCACCTACCTGACCATGACGGGCGAGGAGGTGGAGCTG TGCAGCCGCGGCCGGCACATCCCTGTGGCGTGGGAGAACAAGGACATCTACGCGGCCACC ATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAACGTGGAGTGCGTGACGGCCGTACGGGCG GGGCTGGGCTCCATCATCCCCCTGCAGCTGCTCACCACGCTCAGCCCGCTGGAGATGGAG CTGCGGACGTGCGGCCTCCCCTACATCAACCTTGAGTTCCTGAAGGCCACACCATGTACC AGGTGGGGCTGA------------AGCACATCGAGTTCTTCTGGGGGGCACTGGAGATGT TTGCNCAGGAGGAGCTGTGCAAGTTCATCAAGTTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 6-208, gnl|bosTau2|chr17 (36997207-36996994) | |
| 6-208, gnl|canFam2|chr26 (12791108-12791356) | |
| 6-208, gnl|echTel1|scaffold_212972 (514-695) | |
| 6-208, gnl|hg17|chr12 (111070365-111070652) | |
| 6-208, gnl|Hg17|chr12 (111070618-111070388) | |
| 6-208, gnl|loxAfr1|scaffold_16556 (24818-24504) | |
| 6-208, gnl|monDom2|scaffold_110 (269212-269519) | |
| 6-208, gnl|oryCun1|scaffold_154555 (1017-1254) | |
| 6-208, gnl|panTro1|chr10 (113769881-113770166) | |
| 6-208, gnl|rheMac2|chr11 (113089837-113090122) | |
| 272-437, gnl|bosTau2|chr17 (36996801-36996636) | |
| 272-437, gnl|canFam2|chr26 (12790780-12790952) | |
| 272-437, gnl|danRer3|chr1 (40626886-40626719) | |
| 272-437, gnl|dasNov1|scaffold_56058 (5937-5761) | |
| 272-437, gnl|echTel1|scaffold_212972 (177-350) | |
| 272-437, gnl|galGal2|chrUn (160491993-160491826) | |
| 272-437, gnl|hg17|chr12 (111070018-111070192) | |
| 272-437, gnl|Hg17|chr12 (111070189-111070026) | |
| 272-437, gnl|loxAfr1|scaffold_16556 (25151-24976) | |
| 272-437, gnl|mm7|chr5 (120594782-120594610) | |
| 272-437, gnl|Mm7|chr5 (120594613-120594774) | |
| 272-437, gnl|monDom2|scaffold_110 (268835-269009) | |
| 272-437, gnl|oryCun1|scaffold_154555 (720-895) | |
| 272-437, gnl|panTro1|chr10 (113769534-113769708) | |
| 272-437, gnl|rheMac2|chr11 (113089491-113089665) | |
| 272-437, gnl|rn3|chr12 (36189338-36189510) | |
| 272-437, gnl|tetNig1|chrUn_random (108459855-108460024) | |
| 272-437, gnl|xenTro1|scaffold_1037 (114027-114193) | |
| 539-769, gnl|bosTau2|chr17 (36994815-36994585) | |
| 539-769, gnl|danRer3|chr1 (40632829-40633060) | |
| 539-769, gnl|dasNov1|scaffold_56058 (8308-8062) | |
| 539-769, gnl|galGal2|chrUn (160494373-160494142) | |
| 539-769, gnl|hg17|chr12 (111067834-111068080) | |
| 539-769, gnl|Hg17|chr12 (111068064-111067834) | |
| 539-769, gnl|loxAfr1|scaffold_16556 (26150-25904) | |
| 539-769, gnl|mm7|chr5 (120596933-120596691) | |
| 539-769, gnl|Mm7|chr5 (120596702-120596932) | |
| 539-769, gnl|monDom2|scaffold_110 (266385-266620) | |
| 539-769, gnl|oryCun1|scaffold_214611 (52930-53175) | |
| 539-769, gnl|panTro1|chr10 (113767350-113767596) | |
| 539-769, gnl|rheMac2|chr11 (113087304-113087550) | |
| 539-769, gnl|rn3|chr12 (36187128-36187370) | |
| 539-769, gnl|tetNig1|chrUn_random (108459002-108459235) | |
| 539-769, gnl|xenTro1|scaffold_1037 (113106-113334) | |
| 930-1126, gnl|bosTau2|chr17 (36993081-36992885) | |
| 930-1126, gnl|canFam2|chr26 (12786230-12786449) | |
| 930-1126, gnl|danRer3|chr1 (40630614-40630813) | |
| 930-1126, gnl|dasNov1|scaffold_56058 (11056-10844) | |
| 930-1126, gnl|galGal2|chrUn (160495630-160495430) | |
| 930-1126, gnl|hg17|chr12 (111064054-111064266) | |
| 930-1126, gnl|Hg17|chr12 (111064261-111064065) | |
| 930-1126, gnl|loxAfr1|scaffold_16556 (27539-27327) | |
| 930-1126, gnl|mm7|chr5 (120598730-120598519) | |
| 930-1126, gnl|Mm7|chr5 (120598522-120598718) | |
| 930-1126, gnl|monDom2|scaffold_110 (263911-264122) | |
| 930-1126, gnl|oryCun1|scaffold_70950 (1170-957) | |
| 930-1126, gnl|panTro1|chr10 (113763576-113763788) | |
| 930-1126, gnl|rheMac2|chr11 (113083062-113083274) | |
| 930-1126, gnl|rn3|chr12 (36185470-36185680) | |
| 930-1126, gnl|tetNig1|chrUn_random (108458483-108458682) | |
| 930-1126, gnl|xenTro1|scaffold_1037 (111964-112168) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-208, gnl|bosTau2|chr17 (36997207-36996994) | |
| 6-208, gnl|canFam2|chr26 (12791108-12791356) | |
| 6-208, gnl|echTel1|scaffold_212972 (514-695) | |
| 6-208, gnl|hg17|chr12 (111070365-111070652) | |
| 6-208, gnl|Hg17|chr12 (111070618-111070388) | |
| 6-208, gnl|loxAfr1|scaffold_16556 (24818-24504) | |
| 6-208, gnl|monDom2|scaffold_110 (269212-269519) | |
| 6-208, gnl|oryCun1|scaffold_154555 (1017-1254) | |
| 6-208, gnl|panTro1|chr10 (113769881-113770166) | |
| 6-208, gnl|rheMac2|chr11 (113089837-113090122) | |
| 272-437, gnl|bosTau2|chr17 (36996801-36996636) | |
| 272-437, gnl|canFam2|chr26 (12790780-12790952) | |
| 272-437, gnl|danRer3|chr1 (40626886-40626719) | |
| 272-437, gnl|dasNov1|scaffold_56058 (5937-5761) | |
| 272-437, gnl|echTel1|scaffold_212972 (177-350) | |
| 272-437, gnl|galGal2|chrUn (160491993-160491826) | |
| 272-437, gnl|hg17|chr12 (111070018-111070192) | |
| 272-437, gnl|Hg17|chr12 (111070189-111070026) | |
| 272-437, gnl|loxAfr1|scaffold_16556 (25151-24976) | |
| 272-437, gnl|mm7|chr5 (120594782-120594610) | |
| 272-437, gnl|Mm7|chr5 (120594613-120594774) | |
| 272-437, gnl|monDom2|scaffold_110 (268835-269009) | |
| 272-437, gnl|oryCun1|scaffold_154555 (720-895) | |
| 272-437, gnl|panTro1|chr10 (113769534-113769708) | |
| 272-437, gnl|rheMac2|chr11 (113089491-113089665) | |
| 272-437, gnl|rn3|chr12 (36189338-36189510) | |
| 272-437, gnl|tetNig1|chrUn_random (108459855-108460024) | |
| 272-437, gnl|xenTro1|scaffold_1037 (114027-114193) | |
| 539-769, gnl|bosTau2|chr17 (36994815-36994585) | |
| 539-769, gnl|danRer3|chr1 (40632829-40633060) | |
| 539-769, gnl|dasNov1|scaffold_56058 (8308-8062) | |
| 539-769, gnl|galGal2|chrUn (160494373-160494142) | |
| 539-769, gnl|hg17|chr12 (111067834-111068080) | |
| 539-769, gnl|Hg17|chr12 (111068064-111067834) | |
| 539-769, gnl|loxAfr1|scaffold_16556 (26150-25904) | |
| 539-769, gnl|mm7|chr5 (120596933-120596691) | |
| 539-769, gnl|Mm7|chr5 (120596702-120596932) | |
| 539-769, gnl|monDom2|scaffold_110 (266385-266620) | |
| 539-769, gnl|oryCun1|scaffold_214611 (52930-53175) | |
| 539-769, gnl|panTro1|chr10 (113767350-113767596) | |
| 539-769, gnl|rheMac2|chr11 (113087304-113087550) | |
| 539-769, gnl|rn3|chr12 (36187128-36187370) | |
| 539-769, gnl|tetNig1|chrUn_random (108459002-108459235) | |
| 539-769, gnl|xenTro1|scaffold_1037 (113106-113334) | |
| 930-1126, gnl|bosTau2|chr17 (36993081-36992885) | |
| 930-1126, gnl|canFam2|chr26 (12786230-12786449) | |
| 930-1126, gnl|danRer3|chr1 (40630614-40630813) | |
| 930-1126, gnl|dasNov1|scaffold_56058 (11056-10844) | |
| 930-1126, gnl|galGal2|chrUn (160495630-160495430) | |
| 930-1126, gnl|hg17|chr12 (111064054-111064266) | |
| 930-1126, gnl|Hg17|chr12 (111064261-111064065) | |
| 930-1126, gnl|loxAfr1|scaffold_16556 (27539-27327) | |
| 930-1126, gnl|mm7|chr5 (120598730-120598519) | |
| 930-1126, gnl|Mm7|chr5 (120598522-120598718) | |
| 930-1126, gnl|monDom2|scaffold_110 (263911-264122) | |
| 930-1126, gnl|oryCun1|scaffold_70950 (1170-957) | |
| 930-1126, gnl|panTro1|chr10 (113763576-113763788) | |
| 930-1126, gnl|rheMac2|chr11 (113083062-113083274) | |
| 930-1126, gnl|rn3|chr12 (36185470-36185680) | |
| 930-1126, gnl|tetNig1|chrUn_random (108458483-108458682) | |
| 930-1126, gnl|xenTro1|scaffold_1037 (111964-112168) |