Non-Coding RNA Search

Ss1.1-Mixn-0005m24.5

Sequence:


               
               CGGGGGAGAAAAGGAGAGAAGTAGCTTCTAAAATCCATCTTGGTGGCGCCTTTTACAGTA
GTTTGGCTGATAAGCTGGCGGAGGAAAGATTAATAACGAGGCTTGTCGCTATCAGTACCT
GCTTGTCGATTCCCTGTAACAGGGCTGTCTGTTCAGCATGGAAATTATTGATTAAATAAA
AATTGCTATTAGATTGTGATGTGATCCATAATCACAGACAATGGTGGACATTCCTCTTTT
AGATCCTCAGCCATGCATCAAGTTGTTTCTTTTTTTGCCCTTCCCGTAATTTATATCGCG
CTGACATGGGAGCTCTTTGGGGACAGCCTTTCTGCTCCGCCGCAGAAAAGCCCTGGGCGC
CCTGGGCCTGCGCGGTGCAGGCTGCCTGGAGGCAGGGACCCTCCTGGCCGGAGGGCCGGC
AGCAGTAGGCTTTTGTTTGTTTGGCTAACTTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGAGAAAAGGAGAGAAGTAGCTTCTAAAATCCATCTTGGTGGCGCCTTTTACAGTA
GTTTGGCTGATAAGCTGGCGGAGGAAAGATTAATAACGAGGCTTGTCGCTATCAGTACCT
GCTTGTCGATTCCCTGTAACAGGGCTGTCTGTTCAGCATGGAAATTATTGATTAAATAAA
AATTGCTATTAGATTGTGATGTGATCCATAATCACAGACAATGGTGGACATTCCTCTTTT
AGATCCTCAGCCATGCATCAAGTTGTTTCTTTTTTTGCCCTTCCCGTAATTTATATCGCG
CTGACATGGGAGCTCTTTGGGGACAGCCTTTCTGCTCCGCCGCAGAAAAGCCCTGGGCGC
CCTGGGCCTGCGCGGTGCAGGCTGCCTGGAGGCAGGGACCCTCCTGGCCGGAGGGCCGGC
AGCAGTAGGCTTTTGTTTGTTTGGCTAACTTAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               2-118, + strand, RNAz p=0.594455

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-118, + strand, RNAz p=0.594455

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-356, gnl|bosTau2|chr4 (45763417-45763773)
               

               
               2-356, gnl|Hg17|chr7 (41825225-41824880)
               

               
               2-356, gnl|Mm7|chr13 (15037717-15038058)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-356, gnl|bosTau2|chr4 (45763417-45763773)
               

               
               2-356, gnl|Hg17|chr7 (41825225-41824880)
               

               
               2-356, gnl|Mm7|chr13 (15037717-15038058)

	2-356, gnl\|bosTau2\|chr4 (45763417-45763773)
	2-356, gnl\|Hg17\|chr7 (41825225-41824880)
	2-356, gnl\|Mm7\|chr13 (15037717-15038058)