Ss1.1-Mixn-0009g05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGCCGGGCAGGACTAGGGGCGCGGGAGTGCCATGCCTGGGGCCAGGGCCGCCGCCTTT GTGCCCTGGCCGAAGCTGGTGCTGCTGCCCCTGTTGTTGCTGCTGTTCCACCGGACTCGG CCCCAGGGAAGCCTTGGGCCACTGCAGTGCTATGGAGTCGGACCCTTGGGCGACTTAAAC TGCTCGTGGGAGCCTCTTGGGGACCTGGGAACCCCCTCCACGCTCTACCTCCAGAGCCAG AAGTACCATGCTAACAAAACCTGGATTGTGGCAGTGCCCACGGGGCAGAGCTGGGTGACC ATTCCACGGGAACAGCTCACCACAGCGGACAAACTCCTTGTCTGGGCAGCCAAGGCAGGC CAGCCTCTCTGGACCCCAGTATTCGTGAACCTCGAAACCCAAATGAAGCCAGATGCCCCC CGATTGTACCCTGATGTGGACTTCTCAGAGGATGACCCCCTAGAGGCCATTGTCCAGTGG GCCCCTCCTGTGTGGCCACCGCATAAGGTCCTGGACTGCCAGTTTCGCTACAGAAGATGC CAGGAGACAGACTGGACCCTGCTGGAACCAGAAGTGAAGTCCATACCCCTGACCCCTCTT GAGATCCAGGACCTAGAGCTAGCCACTGTCTATGAGATGTCTGGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGCCGGGCAGGACTAGGGGCGCGGGAGTGCCATGCCTGGGGCCAGGGCCGCCGCCTTT GTGCCCTGGCCGAAGCTGGTGCTGCTGCCCCTGTTGTTGCTGCTGTTCCACCGGACTCGG CCCCAGGGAAGCCTTGGGCCACTGCAGTGCTATGGAGTCGGACCCTTGGGCGACTTAAAC TGCTCGTGGGAGCCTCTTGGGGACCTGGGAACCCCCTCCACGCTCTACCTCCAGAGCCAG AAGTACCATGCTAACAAAACCTGGATTGTGGCAGTGCCCACGGGGCAGAGCTGGGTGACC ATTCCACGGGAACAGCTCACCACAGCGGACAAACTCCTTGTCTGGGCAGCCAAGGCAGGC CAGCCTCTCTGGACCCCAGTATTCGTGAACCTCGAAACCCAAATGAAGCCAGATGCCCCC CGATTGTACCCTGATGTGGACTTCTCAGAGGATGACCCCCTAGAGGCCATTGTCCAGTGG GCCCCTCCTGTGTGGCCACCGCATAAGGTCCTGGACTGCCAGTTTCGCTACAGAAGATGC CAGGAGACAGACTGGACCCTGCTGGAACCAGAAGTGAAGTCCATACCCCTGACCCCTCTT GAGATCCAGGACCTAGAGCTAGCCACTGTCTATGAGATGTCTGGCCGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 289-403, - strand, RNAz p=0.55349 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 289-403, - strand, RNAz p=0.55349 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 108-245, gnl|bosTau2|chr7 (7780396-7780261) | |
| 108-245, gnl|echTel1|scaffold_112920 (633-520) | |
| 108-245, gnl|hg17|chr19 (14004175-14004296) | |
| 108-245, gnl|Hg17|chr19 (14004178-14004315) | |
| 108-245, gnl|mm7|chr8 (82620374-82620255) | |
| 108-245, gnl|Mm7|chr8 (82620377-82620234) | |
| 108-245, gnl|panTro1|chr20 (14635292-14635413) | |
| 108-245, gnl|rheMac2|chr19 (13722948-13723069) | |
| 108-245, gnl|rn3|chr19 (25800518-25800637) | |
| 246-403, gnl|bosTau2|chr7 (7774670-7774513) | |
| 246-403, gnl|canFam2|chr20 (51470390-51470138) | |
| 246-403, gnl|dasNov1|scaffold_134159 (3997-4302) | |
| 246-403, gnl|echTel1|scaffold_203917 (2362-2116) | |
| 246-403, gnl|hg17|chr19 (14011208-14011483) | |
| 246-403, gnl|Hg17|chr19 (14011320-14011477) | |
| 246-403, gnl|mm7|chr8 (82619332-82619075) | |
| 246-403, gnl|Mm7|chr8 (82619236-82619079) | |
| 246-403, gnl|rheMac2|chr19 (13731056-13731331) | |
| 246-403, gnl|rn3|chr19 (25801414-25801690) | |
| 404-541, gnl|bosTau2|chr7 (7774427-7774290) | |
| 404-541, gnl|canFam2|chr20 (51470137-51469749) | |
| 404-541, gnl|dasNov1|scaffold_134159 (4303-4682) | |
| 404-541, gnl|echTel1|scaffold_203917 (2115-1769) | |
| 404-541, gnl|hg17|chr19 (14011484-14011858) | |
| 404-541, gnl|Hg17|chr19 (14011565-14011702) | |
| 404-541, gnl|mm7|chr8 (82619069-82618697) | |
| 404-541, gnl|Mm7|chr8 (82618977-82618840) | |
| 404-541, gnl|oryCun1|scaffold_192349 (5926-5546) | |
| 404-541, gnl|rheMac2|chr19 (13731332-13731707) | |
| 404-541, gnl|rn3|chr19 (25801696-25802057) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 108-245, gnl|bosTau2|chr7 (7780396-7780261) | |
| 108-245, gnl|echTel1|scaffold_112920 (633-520) | |
| 108-245, gnl|hg17|chr19 (14004175-14004296) | |
| 108-245, gnl|Hg17|chr19 (14004178-14004315) | |
| 108-245, gnl|mm7|chr8 (82620374-82620255) | |
| 108-245, gnl|Mm7|chr8 (82620377-82620234) | |
| 108-245, gnl|panTro1|chr20 (14635292-14635413) | |
| 108-245, gnl|rheMac2|chr19 (13722948-13723069) | |
| 108-245, gnl|rn3|chr19 (25800518-25800637) | |
| 246-403, gnl|bosTau2|chr7 (7774670-7774513) | |
| 246-403, gnl|canFam2|chr20 (51470390-51470138) | |
| 246-403, gnl|dasNov1|scaffold_134159 (3997-4302) | |
| 246-403, gnl|echTel1|scaffold_203917 (2362-2116) | |
| 246-403, gnl|hg17|chr19 (14011208-14011483) | |
| 246-403, gnl|Hg17|chr19 (14011320-14011477) | |
| 246-403, gnl|mm7|chr8 (82619332-82619075) | |
| 246-403, gnl|Mm7|chr8 (82619236-82619079) | |
| 246-403, gnl|rheMac2|chr19 (13731056-13731331) | |
| 246-403, gnl|rn3|chr19 (25801414-25801690) | |
| 404-541, gnl|bosTau2|chr7 (7774427-7774290) | |
| 404-541, gnl|canFam2|chr20 (51470137-51469749) | |
| 404-541, gnl|dasNov1|scaffold_134159 (4303-4682) | |
| 404-541, gnl|echTel1|scaffold_203917 (2115-1769) | |
| 404-541, gnl|hg17|chr19 (14011484-14011858) | |
| 404-541, gnl|Hg17|chr19 (14011565-14011702) | |
| 404-541, gnl|mm7|chr8 (82619069-82618697) | |
| 404-541, gnl|Mm7|chr8 (82618977-82618840) | |
| 404-541, gnl|oryCun1|scaffold_192349 (5926-5546) | |
| 404-541, gnl|rheMac2|chr19 (13731332-13731707) | |
| 404-541, gnl|rn3|chr19 (25801696-25802057) |