Non-Coding RNA Search

Ss1.1-Mixn-0011f13.5

Sequence:


               
               CCCAGAAAAAAGAGGGCCACCCACAGCCTCTAGGTGCCCCCACCCTCTGAGGGCCCCAGC
CCCCCATCCCCCCTTCCTCCCAGGGGGCCCAGTGCTCCAGGTCGGGCACAGCCCTGCCGT
TCTGCATCCTGCGGTCAGGGCCTCCAGGCGAGCCTTGGGGGGGCCTGAGAGACTCCAAGT
CCTTGCTGAGATCAATTAGGAGGGGGCCGTCCCCTGGGGCTGGGCAGGTGCCGAGGGCCG
GCTTGGAGCTGATACCGAAGGCCTCTGGGGCGGAAAGTCCTGTATCTGGCAAAGATCAAG
CAGGGTGCGGACGCCCACCAGGCACCAGAGCTCGCCCAGCAGGGAGATGAGGATGCCCAG
GAGGTCCAGCCAGCGGCCCACGGTCAGCAGCAGCACGAAGAGGCCGCCCAGGCGTACCAG
CACCGTCTGGACCTGGCCCTGCAGGCCGGGGTGCTGCCGCTGCTCCTCCTGCATGTAGAT
GACCAGCAAGGTGTAGCAGATAGTGAGCGGCGTCCAGAAGCGCACGGCCTCCGAGGTGGT
CAGGAAGTCCCGGTTGATGAGGGCCACGGCCGCCAGGTTGCCCACCATAAACGTCACAGC
CAGGGCGCGGCCCAGCAGCCGGGGGAGGCTGCGAGCACCGGCCAGCAGGCCCAGGCAGAC
CCCACAGTAGTGTTGGCTGCTGTGTAGCTCGTAGAGCTGGCAGACGTGGCGACGGAGACG
CCGGGCGCCTGCGCTGAGCAGTGAGGCCAGCCCGAGGCCCAGCAGCAGGTTCAGGGTGCG
ATGCGGGGCGCCCTCCTGCAGGAAGCTCAGGCCGCAGGTCAGCCCGCAGCCCAGCGAGTA
CTGGCACAGTAGGTACAGCTGCAGCTTCTCGGGGCCCCGGGAGCCCTTGTCCAGGGAAAG
CAGCATGGAGACAGCCCGGAGGGAGAACTCGAGCACCACAAGGGCAGCCACCCGGGCCCC
CACGATGGTCAGGATCAGGGCCAGCCCTGCCAGGTGCACGGTCTCCAGCAAGGCCCACTG
GGCCCGCAGCCGCTCCTTTTCCAGCTGCCGCTTCGGGTCATTGGCACAGCCCACGAAGAA
GTAGACCTTCAGGAGGTTGCTTAAGACCGAGACTCCGCAGGCCCCGATGAGGCCTTGCAG
GAGGGCGTCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGAAAAAAGAGGGCCACCCACAGCCTCTAGGTGCCCCCACCCTCTGAGGGCCCCAGC
CCCCCATCCCCCCTTCCTCCCAGGGGGCCCAGTGCTCCAGGTCGGGCACAGCCCTGCCGT
TCTGCATCCTGCGGTCAGGGCCTCCAGGCGAGCCTTGGGGGGGCCTGAGAGACTCCAAGT
CCTTGCTGAGATCAATTAGGAGGGGGCCGTCCCCTGGGGCTGGGCAGGTGCCGAGGGCCG
GCTTGGAGCTGATACCGAAGGCCTCTGGGGCGGAAAGTCCTGTATCTGGCAAAGATCAAG
CAGGGTGCGGACGCCCACCAGGCACCAGAGCTCGCCCAGCAGGGAGATGAGGATGCCCAG
GAGGTCCAGCCAGCGGCCCACGGTCAGCAGCAGCACGAAGAGGCCGCCCAGGCGTACCAG
CACCGTCTGGACCTGGCCCTGCAGGCCGGGGTGCTGCCGCTGCTCCTCCTGCATGTAGAT
GACCAGCAAGGTGTAGCAGATAGTGAGCGGCGTCCAGAAGCGCACGGCCTCCGAGGTGGT
CAGGAAGTCCCGGTTGATGAGGGCCACGGCCGCCAGGTTGCCCACCATAAACGTCACAGC
CAGGGCGCGGCCCAGCAGCCGGGGGAGGCTGCGAGCACCGGCCAGCAGGCCCAGGCAGAC
CCCACAGTAGTGTTGGCTGCTGTGTAGCTCGTAGAGCTGGCAGACGTGGCGACGGAGACG
CCGGGCGCCTGCGCTGAGCAGTGAGGCCAGCCCGAGGCCCAGCAGCAGGTTCAGGGTGCG
ATGCGGGGCGCCCTCCTGCAGGAAGCTCAGGCCGCAGGTCAGCCCGCAGCCCAGCGAGTA
CTGGCACAGTAGGTACAGCTGCAGCTTCTCGGGGCCCCGGGAGCCCTTGTCCAGGGAAAG
CAGCATGGAGACAGCCCGGAGGGAGAACTCGAGCACCACAAGGGCAGCCACCCGGGCCCC
CACGATGGTCAGGATCAGGGCCAGCCCTGCCAGGTGCACGGTCTCCAGCAAGGCCCACTG
GGCCCGCAGCCGCTCCTTTTCCAGCTGCCGCTTCGGGTCATTGGCACAGCCCACGAAGAA
GTAGACCTTCAGGAGGTTGCTTAAGACCGAGACTCCGCAGGCCCCGATGAGGCCTTGCAG
GAGGGCGTCGAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5VVD4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5VVD4_HUMAN

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               10-282, gnl|bosTau2|chr16 (38979021-38978726)
               

               
               10-282, gnl|Hg17|chr1 (15819643-15819344)
               

               
               10-282, gnl|Mm7|chr4 (140992821-140993150)
               


               
               468-887, gnl|bosTau2|chr16 (38977120-38976701)
               

               
               468-887, gnl|Hg17|chr1 (15816381-15815959)
               

               
               468-887, gnl|Mm7|chr4 (140994645-140995064)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-282, gnl|bosTau2|chr16 (38979021-38978726)
               

               
               10-282, gnl|Hg17|chr1 (15819643-15819344)
               

               
               10-282, gnl|Mm7|chr4 (140992821-140993150)
               


               
               468-887, gnl|bosTau2|chr16 (38977120-38976701)
               

               
               468-887, gnl|Hg17|chr1 (15816381-15815959)
               

               
               468-887, gnl|Mm7|chr4 (140994645-140995064)

	10-282, gnl\|bosTau2\|chr16 (38979021-38978726)
	10-282, gnl\|Hg17\|chr1 (15819643-15819344)
	10-282, gnl\|Mm7\|chr4 (140992821-140993150)

	468-887, gnl\|bosTau2\|chr16 (38977120-38976701)
	468-887, gnl\|Hg17\|chr1 (15816381-15815959)
	468-887, gnl\|Mm7\|chr4 (140994645-140995064)