Non-Coding RNA Search

Ss1.1-Mixn-0012l09.5

Sequence:


               
               CTGACTTACTAATGCAGCAGGGACTTTTAATCACTGAGTATTGTGAGTGTGCATCACCTC
TGGGCCAAGGACAAGCCATTGATCTACATGCCTTGGATGCCCAGGAGGGCCCCTGGTGCC
ACGGCATAGTATACACTAACATCGTTCTGCCAAGGTAGGAAGCCCCTGACCCCCAAGCAG
CGGTGCCACTCTTCCAAGTCTCTTGGTGCACAATAAACCTATTGCTTGAAGCTGTGAACA
GCTGAGAAGTGGCCTGGAGAGGCAGAAACCGTCGGTTCTCTATCCAGTATGTTTTATGTG
CAGAATGTTGAGAGAGCTGTCTGAGCAGACGCGGAGAGAGAGCAGAGCCTCCTTCCAGCC
GGTCCTGTTGACAGTGCACCTGAAGGGCCAGGACGCGCTTCTCGAAGTGCTGCATGTTCC
CGACTCTCCTGAAACGTGAACTGTCTAGAGAGGAAACCTGGGGTCGGCGAGGTCCTGGGC
TCGGGTATTGTGGTGTGACTTGTGGCTGTGAGGTTTCACATAACATATTTATAAATGTTA
CTCAGGTTAAAAGTATTTAAGAATAACAGTTACCTACTTGTAAATATGCTGTTAACCAAA
AGAGCTTCCCCTCCCCCCCACCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGACTTACTAATGCAGCAGGGACTTTTAATCACTGAGTATTGTGAGTGTGCATCACCTC
TGGGCCAAGGACAAGCCATTGATCTACATGCCTTGGATGCCCAGGAGGGCCCCTGGTGCC
ACGGCATAGTATACACTAACATCGTTCTGCCAAGGTAGGAAGCCCCTGACCCCCAAGCAG
CGGTGCCACTCTTCCAAGTCTCTTGGTGCACAATAAACCTATTGCTTGAAGCTGTGAACA
GCTGAGAAGTGGCCTGGAGAGGCAGAAACCGTCGGTTCTCTATCCAGTATGTTTTATGTG
CAGAATGTTGAGAGAGCTGTCTGAGCAGACGCGGAGAGAGAGCAGAGCCTCCTTCCAGCC
GGTCCTGTTGACAGTGCACCTGAAGGGCCAGGACGCGCTTCTCGAAGTGCTGCATGTTCC
CGACTCTCCTGAAACGTGAACTGTCTAGAGAGGAAACCTGGGGTCGGCGAGGTCCTGGGC
TCGGGTATTGTGGTGTGACTTGTGGCTGTGAGGTTTCACATAACATATTTATAAATGTTA
CTCAGGTTAAAAGTATTTAAGAATAACAGTTACCTACTTGTAAATATGCTGTTAACCAAA
AGAGCTTCCCCTCCCCCCCACCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               505-624, - strand, RNAz p=0.66398

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               505-624, - strand, RNAz p=0.66398

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-624, gnl|bosTau2|chr19 (27912257-27911652)
               

               
               1-624, gnl|Hg17|chr17 (46128368-46127708)
               

               
               1-624, gnl|Mm7|chr11 (94448727-94449349)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-624, gnl|bosTau2|chr19 (27912257-27911652)
               

               
               1-624, gnl|Hg17|chr17 (46128368-46127708)
               

               
               1-624, gnl|Mm7|chr11 (94448727-94449349)

	1-624, gnl\|bosTau2\|chr19 (27912257-27911652)
	1-624, gnl\|Hg17\|chr17 (46128368-46127708)
	1-624, gnl\|Mm7\|chr11 (94448727-94449349)