Non-Coding RNA Search

Ss1.1-Mixn-0013g04.5

Sequence:


               
               GCGGAGGACGCCGGCTCGGCCCCGGGAGCTGTGGCCCGGGCCCCGCGGGCGGATGAGCCC
GGCCCGGCGAGGCCCAGCTTGGAGCAGAGGAGGCAGCCCGGGGAGGGCTCGGCCTGGCTG
ACTTCCCGTGACCCAGAGCCTAAGCCGTCCCCACCACCCTGTTTCAGGAGCCCACGGCAC
AGCCTGCCCTGAGAAACACTGGAAACTGGGCGAGGCCCCAGGCGGGGGGACCTGTTTTTC
CTGTTTCCCACAGAGTTCCCTGCAGCCCGGTCCAGGCGTGTGCATTCATGAGTGAGGAAC
CTGAGCCGCACCGAGCATCCTGACAGCGAGAGCAGGGCCTGGTCAGGGTGATGGCTACAG
GCCCCGACCTCTGGAATGGCACCGTCAACGGCACCTCGGATGGGGATGAGTGGGGCTACA
GGTGCCGCTTCCACGAGGACTTCAAGTACGTGCTGCTGCCCCTGAGCTACGGCGTGGTGT
GCGTGCTGGGGCTGAGTCTGAACGCCGGGGCGCTCTACATCTTCCTGTGCCGCCTCAAGA
CCTGGAACGCCTCCACCACGTACATGTTCCACCTGGCCGTGTCCGACGCGCTGTACGCCG
CCTCCCTGCCCCTGCTGGTCTATTACTACGCGCGCGGCGACCACTGGCCCTTCAGCACGG
CGCTCTGCAAGCTGGTGCGCTTCCTCTTCTACACCAACCTGTACTGCAGCATCCTGTTCC
TCACGTGCATCAGCGTGCACCGCTGCCTGGGCGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGAGGACGCCGGCTCGGCCCCGGGAGCTGTGGCCCGGGCCCCGCGGGCGGATGAGCCC
GGCCCGGCGAGGCCCAGCTTGGAGCAGAGGAGGCAGCCCGGGGAGGGCTCGGCCTGGCTG
ACTTCCCGTGACCCAGAGCCTAAGCCGTCCCCACCACCCTGTTTCAGGAGCCCACGGCAC
AGCCTGCCCTGAGAAACACTGGAAACTGGGCGAGGCCCCAGGCGGGGGGACCTGTTTTTC
CTGTTTCCCACAGAGTTCCCTGCAGCCCGGTCCAGGCGTGTGCATTCATGAGTGAGGAAC
CTGAGCCGCACCGAGCATCCTGACAGCGAGAGCAGGGCCTGGTCAGGGTGATGGCTACAG
GCCCCGACCTCTGGAATGGCACCGTCAACGGCACCTCGGATGGGGATGAGTGGGGCTACA
GGTGCCGCTTCCACGAGGACTTCAAGTACGTGCTGCTGCCCCTGAGCTACGGCGTGGTGT
GCGTGCTGGGGCTGAGTCTGAACGCCGGGGCGCTCTACATCTTCCTGTGCCGCCTCAAGA
CCTGGAACGCCTCCACCACGTACATGTTCCACCTGGCCGTGTCCGACGCGCTGTACGCCG
CCTCCCTGCCCCTGCTGGTCTATTACTACGCGCGCGGCGACCACTGGCCCTTCAGCACGG
CGCTCTGCAAGCTGGTGCGCTTCCTCTTCTACACCAACCTGTACTGCAGCATCCTGTTCC
TCACGTGCATCAGCGTGCACCGCTGCCTGGGCGTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|24209883|gb|AAN41638.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|24209883|gb|AAN41638.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               343-756, gnl|bosTau2|chr15 (33444629-33444216)
               

               
               343-756, gnl|Hg17|chr11 (72622845-72623258)
               

               
               343-756, gnl|Mm7|chr7 (97045350-97044937)
               


               
               541-755, gnl|bosTau2|chr12 (38033279-38033493)
               

               
               541-755, gnl|Hg17|chr13 (96437824-96437610)
               

               
               541-755, gnl|Mm7|chr14 (114431973-114431759)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               343-756, gnl|bosTau2|chr15 (33444629-33444216)
               

               
               343-756, gnl|Hg17|chr11 (72622845-72623258)
               

               
               343-756, gnl|Mm7|chr7 (97045350-97044937)
               


               
               541-755, gnl|bosTau2|chr12 (38033279-38033493)
               

               
               541-755, gnl|Hg17|chr13 (96437824-96437610)
               

               
               541-755, gnl|Mm7|chr14 (114431973-114431759)

	343-756, gnl\|bosTau2\|chr15 (33444629-33444216)
	343-756, gnl\|Hg17\|chr11 (72622845-72623258)
	343-756, gnl\|Mm7\|chr7 (97045350-97044937)

	541-755, gnl\|bosTau2\|chr12 (38033279-38033493)
	541-755, gnl\|Hg17\|chr13 (96437824-96437610)
	541-755, gnl\|Mm7\|chr14 (114431973-114431759)