Ss1.1-Mixn-0016d21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGACAGGTGGGCCTGCCAGGTGTCCGAGAGCTCCTGCAGCTGCAGCTTCAGTTCCCGC GCCGAGGCCACGGCCTCGCCCTCCCGCACCTTGAGCGCCTTCAGCTCCTCCTGCAGCCGC GCCACGTTGTTCTCGTCGGGCAGAGAGCTGTTCCTCTTCTCCATGTCTAGAACCTTGTCT TGCATCTCCCGCAGGGCCCCCAGAGTCTCTGTCTCCCGCAGCCGCGACTGCTCCAGCTCA GTCTCTAGGTGGGCCACAAAATCCTCAGTGAGGCGAGGGTTATCCTGCTGCTCCTGCAGC TGCCGGATGGTGCTCTGGGCCTTCTGCAGGTCCTCAGCTGCTGAGCTGCACTGCTGCCGC ACCACTGCCAGCTCCCGCTTGATGACGTAGTTCTCCTCGGCCTCCTGCGCTCGTGTCACC TGCCCCTTCTCCAGGGTCTCAATCCGTTGCTTCAGGAGCCGGTTCTCTGTGCGAAGCCTT TTGATCTCGATCTGCTCCTCCATCTCCTTGCTCTTCATGGCTGCATATTCCTTCTCCAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGACAGGTGGGCCTGCCAGGTGTCCGAGAGCTCCTGCAGCTGCAGCTTCAGTTCCCGC GCCGAGGCCACGGCCTCGCCCTCCCGCACCTTGAGCGCCTTCAGCTCCTCCTGCAGCCGC GCCACGTTGTTCTCGTCGGGCAGAGAGCTGTTCCTCTTCTCCATGTCTAGAACCTTGTCT TGCATCTCCCGCAGGGCCCCCAGAGTCTCTGTCTCCCGCAGCCGCGACTGCTCCAGCTCA GTCTCTAGGTGGGCCACAAAATCCTCAGTGAGGCGAGGGTTATCCTGCTGCTCCTGCAGC TGCCGGATGGTGCTCTGGGCCTTCTGCAGGTCCTCAGCTGCTGAGCTGCACTGCTGCCGC ACCACTGCCAGCTCCCGCTTGATGACGTAGTTCTCCTCGGCCTCCTGCGCTCGTGTCACC TGCCCCTTCTCCAGGGTCTCAATCCGTTGCTTCAGGAGCCGGTTCTCTGTGCGAAGCCTT TTGATCTCGATCTGCTCCTCCATCTCCTTGCTCTTCATGGCTGCATATTCCTTCTCCAGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 14-133, - strand, RNAz p=0.556451 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 14-133, - strand, RNAz p=0.556451 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 14-157, gnl|bosTau2|chr7 (12540769-12540626) | |
| 14-157, gnl|Hg17|chr19 (7832905-7832762) | |
| 14-157, gnl|Mm7|chr8 (4169732-4169589) | |
| 284-427, gnl|bosTau2|chr7 (12536448-12536305) | |
| 284-427, gnl|canFam2|chr20 (55568320-55568412) | |
| 284-427, gnl|danRer3|chrUn (147697903-147697811) | |
| 284-427, gnl|dasNov1|scaffold_26501 (13661-13753) | |
| 284-427, gnl|echTel1|scaffold_260725 (1845-1937) | |
| 284-427, gnl|fr1|chrUn (232692084-232691992) | |
| 284-427, gnl|galGal2|chr8 (14431197-14431289) | |
| 284-427, gnl|hg17|chr19 (7829076-7829168) | |
| 284-427, gnl|Hg17|chr19 (7829218-7829075) | |
| 284-427, gnl|loxAfr1|scaffold_47815 (4664-4756) | |
| 284-427, gnl|mm7|chr8 (4167204-4167296) | |
| 284-427, gnl|Mm7|chr8 (4167346-4167203) | |
| 284-427, gnl|monDom2|scaffold_54 (178176-178084) | |
| 284-427, gnl|oryCun1|scaffold_197801 (8247-8155) | |
| 284-427, gnl|panTro1|chr20 (8184703-8184795) | |
| 284-427, gnl|rheMac2|chr19 (8064183-8064091) | |
| 284-427, gnl|rn3|chr12 (1591877-1591785) | |
| 284-427, gnl|tetNig1|chr18 (1280372-1280464) | |
| 284-427, gnl|xenTro1|scaffold_115 (1113190-1113098) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-157, gnl|bosTau2|chr7 (12540769-12540626) | |
| 14-157, gnl|Hg17|chr19 (7832905-7832762) | |
| 14-157, gnl|Mm7|chr8 (4169732-4169589) | |
| 284-427, gnl|bosTau2|chr7 (12536448-12536305) | |
| 284-427, gnl|canFam2|chr20 (55568320-55568412) | |
| 284-427, gnl|danRer3|chrUn (147697903-147697811) | |
| 284-427, gnl|dasNov1|scaffold_26501 (13661-13753) | |
| 284-427, gnl|echTel1|scaffold_260725 (1845-1937) | |
| 284-427, gnl|fr1|chrUn (232692084-232691992) | |
| 284-427, gnl|galGal2|chr8 (14431197-14431289) | |
| 284-427, gnl|hg17|chr19 (7829076-7829168) | |
| 284-427, gnl|Hg17|chr19 (7829218-7829075) | |
| 284-427, gnl|loxAfr1|scaffold_47815 (4664-4756) | |
| 284-427, gnl|mm7|chr8 (4167204-4167296) | |
| 284-427, gnl|Mm7|chr8 (4167346-4167203) | |
| 284-427, gnl|monDom2|scaffold_54 (178176-178084) | |
| 284-427, gnl|oryCun1|scaffold_197801 (8247-8155) | |
| 284-427, gnl|panTro1|chr20 (8184703-8184795) | |
| 284-427, gnl|rheMac2|chr19 (8064183-8064091) | |
| 284-427, gnl|rn3|chr12 (1591877-1591785) | |
| 284-427, gnl|tetNig1|chr18 (1280372-1280464) | |
| 284-427, gnl|xenTro1|scaffold_115 (1113190-1113098) |