Ss1.1-Mixn-0017b12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGAGCAGGACCTGGGCGACTGCGACGTTAGCCCCGCGGCGCTGGCGGAGAACGGGCTC GGCTCTGCTCTGACCAACGGGGGATTAAACCTGCACAGCCCGGTGAAGAGGAAGCTGGAA ACGGAGAAGGACTACGTCTTTGACAAGAGGCTCAGGTACAGCGTCCGCCAGAACGAAAGC AACTGTCGGTTTCGGGACATCGTCGTGCGGAAGGAAGAGGGGTTCACGCACATCCTGCTG TCCAGCCAGACCTCGGACAACAACGCACTGACCCCCGAGGTGAGAGGGGCGGGCCGGGAG GCGCTCTGCAACGCGGCCACAGATGACAGCAAACTGCTGCTCCTCAGCGCCGTGGGCAGC GTGTTCTGCAGCGGCCTGGATTATTCCTACCTGATCGGCCGGTTGTCCAGCGACCGGAGA AAGGAGAGCACCCGGATCGCGGAGGCCATCAGGGACTTCGTGAAGGCCTTTATCCAGTTC AAGAAGCCCATCGTGGTGGCGATTAATGGGCCGGCGCTGGGCCTGGGCGCCTCCATCCTG CCCCTGTGCGATATCGTGTGGGCCAGCGAGAAGGCCTGGTTCCAGACCCCCTACGCCACC ATCCGCCTGACGCCTGCCGGCTGCTCCTCCTACACCTTCCCCCAGATCCTGGGCGTGGCG CTGGCCAACGAGATGCTCTTCTGCGGGCGGAAGCTCACCGCCCAGGAGGCGTGCAGCAGA GGACTGGTGTCGCAGGTCTTCTGGCCGACCACGTTCAGCCAGGAGGTCATGCTGCGGGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGAGCAGGACCTGGGCGACTGCGACGTTAGCCCCGCGGCGCTGGCGGAGAACGGGCTC GGCTCTGCTCTGACCAACGGGGGATTAAACCTGCACAGCCCGGTGAAGAGGAAGCTGGAA ACGGAGAAGGACTACGTCTTTGACAAGAGGCTCAGGTACAGCGTCCGCCAGAACGAAAGC AACTGTCGGTTTCGGGACATCGTCGTGCGGAAGGAAGAGGGGTTCACGCACATCCTGCTG TCCAGCCAGACCTCGGACAACAACGCACTGACCCCCGAGGTGAGAGGGGCGGGCCGGGAG GCGCTCTGCAACGCGGCCACAGATGACAGCAAACTGCTGCTCCTCAGCGCCGTGGGCAGC GTGTTCTGCAGCGGCCTGGATTATTCCTACCTGATCGGCCGGTTGTCCAGCGACCGGAGA AAGGAGAGCACCCGGATCGCGGAGGCCATCAGGGACTTCGTGAAGGCCTTTATCCAGTTC AAGAAGCCCATCGTGGTGGCGATTAATGGGCCGGCGCTGGGCCTGGGCGCCTCCATCCTG CCCCTGTGCGATATCGTGTGGGCCAGCGAGAAGGCCTGGTTCCAGACCCCCTACGCCACC ATCCGCCTGACGCCTGCCGGCTGCTCCTCCTACACCTTCCCCCAGATCCTGGGCGTGGCG CTGGCCAACGAGATGCTCTTCTGCGGGCGGAAGCTCACCGCCCAGGAGGCGTGCAGCAGA GGACTGGTGTCGCAGGTCTTCTGGCCGACCACGTTCAGCCAGGAGGTCATGCTGCGGGTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 551-660, + strand, RNAz p=0.831125 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 551-660, + strand, RNAz p=0.831125 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 61-293, gnl|bosTau2|chr18 (5609980-5609748) | |
| 61-293, gnl|Hg17|chr16 (79224635-79224394) | |
| 61-293, gnl|Mm7|chr8 (115206962-115206729) | |
| 450-664, gnl|bosTau2|chr18 (5593511-5593297) | |
| 450-664, gnl|canFam2|chr5 (74125561-74125327) | |
| 450-664, gnl|danRer3|chr2 (15442133-15442366) | |
| 450-664, gnl|dasNov1|scaffold_23190 (5550-5320) | |
| 450-664, gnl|echTel1|scaffold_284908 (1814-2051) | |
| 450-664, gnl|fr1|chrUn (117309521-117309744) | |
| 450-664, gnl|galGal2|chrUn (115497846-115498078) | |
| 450-664, gnl|hg17|chr16 (79204020-79204253) | |
| 450-664, gnl|Hg17|chr16 (79204237-79204023) | |
| 450-664, gnl|loxAfr1|scaffold_4852 (74921-74687) | |
| 450-664, gnl|mm7|chr8 (115194785-115195018) | |
| 450-664, gnl|Mm7|chr8 (115195002-115194788) | |
| 450-664, gnl|monDom2|scaffold_23 (39492128-39492374) | |
| 450-664, gnl|oryCun1|scaffold_171491 (1196-963) | |
| 450-664, gnl|panTro1|chr18_random (40462490-40462723) | |
| 450-664, gnl|rheMac2|chr20 (78766071-78766304) | |
| 450-664, gnl|rn3|chr17 (35301882-35302115) | |
| 450-664, gnl|tetNig1|chr5 (4669531-4669308) | |
| 450-664, gnl|xenTro1|scaffold_519 (767241-767014) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-293, gnl|bosTau2|chr18 (5609980-5609748) | |
| 61-293, gnl|Hg17|chr16 (79224635-79224394) | |
| 61-293, gnl|Mm7|chr8 (115206962-115206729) | |
| 450-664, gnl|bosTau2|chr18 (5593511-5593297) | |
| 450-664, gnl|canFam2|chr5 (74125561-74125327) | |
| 450-664, gnl|danRer3|chr2 (15442133-15442366) | |
| 450-664, gnl|dasNov1|scaffold_23190 (5550-5320) | |
| 450-664, gnl|echTel1|scaffold_284908 (1814-2051) | |
| 450-664, gnl|fr1|chrUn (117309521-117309744) | |
| 450-664, gnl|galGal2|chrUn (115497846-115498078) | |
| 450-664, gnl|hg17|chr16 (79204020-79204253) | |
| 450-664, gnl|Hg17|chr16 (79204237-79204023) | |
| 450-664, gnl|loxAfr1|scaffold_4852 (74921-74687) | |
| 450-664, gnl|mm7|chr8 (115194785-115195018) | |
| 450-664, gnl|Mm7|chr8 (115195002-115194788) | |
| 450-664, gnl|monDom2|scaffold_23 (39492128-39492374) | |
| 450-664, gnl|oryCun1|scaffold_171491 (1196-963) | |
| 450-664, gnl|panTro1|chr18_random (40462490-40462723) | |
| 450-664, gnl|rheMac2|chr20 (78766071-78766304) | |
| 450-664, gnl|rn3|chr17 (35301882-35302115) | |
| 450-664, gnl|tetNig1|chr5 (4669531-4669308) | |
| 450-664, gnl|xenTro1|scaffold_519 (767241-767014) |