Ss1.1-Mixn-0018l13.5
|
CCTGCGGTTCTCAGCCTCCCCAGACCCAAGCCCTGGTGGACTTTCCGACGGGAGCTTGGC
TGAGGCCCAGGCTGAGGATGAGAGCAAGGACCGTGGTCCCTCAGGCCTGGCCTCTTGAGA
TGTCACTTTTGGCTCCAGGGGCGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
GGCCACGAGGATGCCAGCAACCGAAGAGGCTGACTACGTGGTGTCCAGGTATTTTTTTCC
CCCAACAAGTTGTGCAGTGTCTATGGCCCTAAGGGGGAAGGCGCCCACCCCACACCCTGG
TCTCTCCTTTTTGCCGTGTTCCTGGATGTGCCGGGCCCATGGGGTTATTCAAAGGAGGTG
GCACTTAGCTTGAGTGGGGAAGAGGGCTGCCAATCTGTGCACACCCTCAGGTGGGCTCTG
TGACAGAGAAGGGGCCCCATCAGCTCTGTACCCAGTGCCTGGCAGCAGAGGCTTCAGGTG
GGCGCAGGCCATCCCCAGCCCAGGCAGCCACTTCTGCCAAGAACTCTCTCAGACCCGGGC
AGCCTCAACACTGCATTTCACAGATCCAGGATGCCGAAGGGAAGCAGCATCTCCAGAGCC
ACACTGGGGACTGTGGCAGAACCAGACTCCCCTTTCCTAGAGGAACAGGTCTTCAGACAG
ACAGGACCCCCCGCCCCTCCTCTGGCCTCTTCCTCTTGTTTGGTGGTTCCCTTTTATTGC
CACTGCTCACTCCTGCCCTCTCCCCACATCTTGGAAAACCCTTCTAAGGGTTTGATGTGT
GTGCTTATTCAAATTGTGGAATGTGCATCATTCTGTTTTGAATTCACATAAACAGTATTG
ATGTAGAAATCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTGCGGTTCTCAGCCTCCCCAGACCCAAGCCCTGGTGGACTTTCCGACGGGAGCTTGGC
TGAGGCCCAGGCTGAGGATGAGAGCAAGGACCGTGGTCCCTCAGGCCTGGCCTCTTGAGA
TGTCACTTTTGGCTCCAGGGGCGTTGGGCTCTTCATTGGTGTGGATCTGATCAAAGATGA
GGCCACGAGGATGCCAGCAACCGAAGAGGCTGACTACGTGGTGTCCAGGTATTTTTTTCC
CCCAACAAGTTGTGCAGTGTCTATGGCCCTAAGGGGGAAGGCGCCCACCCCACACCCTGG
TCTCTCCTTTTTGCCGTGTTCCTGGATGTGCCGGGCCCATGGGGTTATTCAAAGGAGGTG
GCACTTAGCTTGAGTGGGGAAGAGGGCTGCCAATCTGTGCACACCCTCAGGTGGGCTCTG
TGACAGAGAAGGGGCCCCATCAGCTCTGTACCCAGTGCCTGGCAGCAGAGGCTTCAGGTG
GGCGCAGGCCATCCCCAGCCCAGGCAGCCACTTCTGCCAAGAACTCTCTCAGACCCGGGC
AGCCTCAACACTGCATTTCACAGATCCAGGATGCCGAAGGGAAGCAGCATCTCCAGAGCC
ACACTGGGGACTGTGGCAGAACCAGACTCCCCTTTCCTAGAGGAACAGGTCTTCAGACAG
ACAGGACCCCCCGCCCCTCCTCTGGCCTCTTCCTCTTGTTTGGTGGTTCCCTTTTATTGC
CACTGCTCACTCCTGCCCTCTCCCCACATCTTGGAAAACCCTTCTAAGGGTTTGATGTGT
GTGCTTATTCAAATTGTGGAATGTGCATCATTCTGTTTTGAATTCACATAAACAGTATTG
ATGTAGAAATCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
29-339, gnl|bosTau2|chr7 (22193048-22193358) |
|
29-339, gnl|Hg17|chr5 (177574565-177574217) |
| |
|
526-643, gnl|bosTau2|chr7 (22193424-22193539) |
|
526-643, gnl|Hg17|chr5 (177574096-177573980) |
| |
|
694-852, gnl|bosTau2|chr7 (22193659-22193815) |
|
694-852, gnl|canFam2|chr11 (6356289-6355820) |
|
694-852, gnl|dasNov1|scaffold_63290 (4150-3635) |
|
694-852, gnl|hg17|chr5 (177573316-177573838) |
|
694-852, gnl|Hg17|chr5 (177573847-177573713) |
|
694-852, gnl|loxAfr1|scaffold_6661 (50357-50940) |
|
694-852, gnl|oryCun1|scaffold_198635 (37295-36914) |
|
694-852, gnl|panTro1|chr4 (185076304-185076832) |
|
694-852, gnl|rheMac2|chr6 (174783683-174784214) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
29-339, gnl|bosTau2|chr7 (22193048-22193358) |
|
29-339, gnl|Hg17|chr5 (177574565-177574217) |
| |
|
526-643, gnl|bosTau2|chr7 (22193424-22193539) |
|
526-643, gnl|Hg17|chr5 (177574096-177573980) |
| |
|
694-852, gnl|bosTau2|chr7 (22193659-22193815) |
|
694-852, gnl|canFam2|chr11 (6356289-6355820) |
|
694-852, gnl|dasNov1|scaffold_63290 (4150-3635) |
|
694-852, gnl|hg17|chr5 (177573316-177573838) |
|
694-852, gnl|Hg17|chr5 (177573847-177573713) |
|
694-852, gnl|loxAfr1|scaffold_6661 (50357-50940) |
|
694-852, gnl|oryCun1|scaffold_198635 (37295-36914) |
|
694-852, gnl|panTro1|chr4 (185076304-185076832) |
|
694-852, gnl|rheMac2|chr6 (174783683-174784214) |
