Non-Coding RNA Search

Ss1.1-Mixn-0020i04.5

Sequence:


               
               GCACGCTGATTGACAGCTCGTCCTCCTTCCGCGCCTACCGGGCCGCCCTCTCGGAGGTGG
AGCCACCGTGCATCCCCTACCTGGGGCTCATCCTGCAGGACCTCACCTTCGTTCACCTGG
GAAACCCAGACTACATCGACGGGAAGGTGAATTTTTCCAAGCGGTGGCAGCAGTTTAACA
TCCTGGACAGCATGCGGTGCTTCCAGCAGGCGCATTACGACATCCGGAGGAATGATGACA
TCATCAACTTCTTCAACGACTTCAGCGACCACCTGGCCGAGGAGGCCCTGTGGGAACTCT
CTCTGAAAATCAAGCCCAGGAACATAACAAGGAGAAAAACAGACCGGGAAGAGAAGACCT
AGGAGCAGGTGCCACGAGCGAGGAGAACGCTCCAGAGAGGCTCAGAGGGCCCCTCCAAGA
CCGCAAGGGACCTTGGACCTGTGACGCGGCAGTGGCACACGTCCTGGCCTCAGCGCCCCA
AGGCCCAGCCAGGCCCCTGCGGTGTGGGCCCGGGTCCGGAGCCTGCGGCAGCTTCCTGCC
TTCCTCCTCCCCAGGCGCAGACCCCTCGGCCCACGTGGAGTCAGCAGGCAGGTCGCGTTG
CTCATTTGTGACCCGGTGGTTTTGGTTTGGTTTGGTTTCTGCTTTGCTCGGTCTTCCGCT
CTCGCCCCCTCCCCACCTCTCCTCCCCCAAGCCTGGGAGCTGCGCAGGGACACCTTCCGC
AGACCAGGGGACAGCAGGGATCTGCCGAAGGGACCGATGAGTGGAGGCCCAAGCACCCTC
AGGGGAGGCGCTTGCTCTCCTGGTGACCTTGGAAGAAGGGGACATGCAGTCAGGTGGGCA
GAAGGCAGGCCGGGGGGAGACCCCTCACTCTCCACGCCCCACTTCTTAAACTGGATGGTG
TGCGCTGCTCGGCTGGCCCAGAAAGGTACGACAGGCGCCCTCCCAGCAGCCCTGGAGCTG
GCGCTTCAGTCACGGTACTGGCCTCCTTTGCTGGGCCTCGAGCAGCAGTTTCTCCCGCCC
CTTCATCTCCCGCCCTGTCCTGCTGGCCCTCCCTGTGACCTGGCACCATGGGAGCTGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACGCTGATTGACAGCTCGTCCTCCTTCCGCGCCTACCGGGCCGCCCTCTCGGAGGTGG
AGCCACCGTGCATCCCCTACCTGGGGCTCATCCTGCAGGACCTCACCTTCGTTCACCTGG
GAAACCCAGACTACATCGACGGGAAGGTGAATTTTTCCAAGCGGTGGCAGCAGTTTAACA
TCCTGGACAGCATGCGGTGCTTCCAGCAGGCGCATTACGACATCCGGAGGAATGATGACA
TCATCAACTTCTTCAACGACTTCAGCGACCACCTGGCCGAGGAGGCCCTGTGGGAACTCT
CTCTGAAAATCAAGCCCAGGAACATAACAAGGAGAAAAACAGACCGGGAAGAGAAGACCT
AGGAGCAGGTGCCACGAGCGAGGAGAACGCTCCAGAGAGGCTCAGAGGGCCCCTCCAAGA
CCGCAAGGGACCTTGGACCTGTGACGCGGCAGTGGCACACGTCCTGGCCTCAGCGCCCCA
AGGCCCAGCCAGGCCCCTGCGGTGTGGGCCCGGGTCCGGAGCCTGCGGCAGCTTCCTGCC
TTCCTCCTCCCCAGGCGCAGACCCCTCGGCCCACGTGGAGTCAGCAGGCAGGTCGCGTTG
CTCATTTGTGACCCGGTGGTTTTGGTTTGGTTTGGTTTCTGCTTTGCTCGGTCTTCCGCT
CTCGCCCCCTCCCCACCTCTCCTCCCCCAAGCCTGGGAGCTGCGCAGGGACACCTTCCGC
AGACCAGGGGACAGCAGGGATCTGCCGAAGGGACCGATGAGTGGAGGCCCAAGCACCCTC
AGGGGAGGCGCTTGCTCTCCTGGTGACCTTGGAAGAAGGGGACATGCAGTCAGGTGGGCA
GAAGGCAGGCCGGGGGGAGACCCCTCACTCTCCACGCCCCACTTCTTAAACTGGATGGTG
TGCGCTGCTCGGCTGGCCCAGAAAGGTACGACAGGCGCCCTCCCAGCAGCCCTGGAGCTG
GCGCTTCAGTCACGGTACTGGCCTCCTTTGCTGGGCCTCGAGCAGCAGTTTCTCCCGCCC
CTTCATCTCCCGCCCTGTCCTGCTGGCCCTCCCTGTGACCTGGCACCATGGGAGCTGGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q7PSV2_ANOGA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q7PSV2_ANOGA

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               212-456, gnl|bosTau2|chr11 (82151731-82151490)
               

               
               212-456, gnl|Hg17|chr9 (131484588-131484342)
               

               
               212-456, gnl|Mm7|chr2 (29745231-29745439)
               


               
               482-1079, gnl|bosTau2|chr11 (82151492-82150919)
               

               
               482-1079, gnl|Hg17|chr9 (131484344-131483665)
               

               
               482-1079, gnl|Mm7|chr2 (29745437-29746104)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               212-456, gnl|bosTau2|chr11 (82151731-82151490)
               

               
               212-456, gnl|Hg17|chr9 (131484588-131484342)
               

               
               212-456, gnl|Mm7|chr2 (29745231-29745439)
               


               
               482-1079, gnl|bosTau2|chr11 (82151492-82150919)
               

               
               482-1079, gnl|Hg17|chr9 (131484344-131483665)
               

               
               482-1079, gnl|Mm7|chr2 (29745437-29746104)

	212-456, gnl\|bosTau2\|chr11 (82151731-82151490)
	212-456, gnl\|Hg17\|chr9 (131484588-131484342)
	212-456, gnl\|Mm7\|chr2 (29745231-29745439)

	482-1079, gnl\|bosTau2\|chr11 (82151492-82150919)
	482-1079, gnl\|Hg17\|chr9 (131484344-131483665)
	482-1079, gnl\|Mm7\|chr2 (29745437-29746104)