Ss1.1-Mixn-0020j07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCAACCTCCTCTGCTGCCGCTACCAAGTCGCTGGTGGCTCAGGTGGCTCCGCTTCGATG TCCTAGTCCAGGGGCTCCCCCGGCCGGATTGGGCTGGGCTCCCCTCACCCGCCGCTGGAG TCATGAGGGCGAACCGGGCTCTGCAGGTGCTGGGCTTCCTCCTCAGCCTGGCCCGGGGCT CCGAGGTGGGCAACTCTCAGGCAGTGTGCCCTGGGACTCTGAACGGGCTGAGTGTGACCG GCGATGCTGAGAACCAGTACCAGACCCTGTACAAGCTCTACGAGAGGTGTGAGGTGGTCA TGGGGAACCTGGAGATCGTGCTCACGGGACACAATGCTGACCTCTCCTTTCTGCAGTGGA TCCGAGAAGTGACCGGCTATGTCCTCGTGGCCATGAACGAGTTCTCTACGCTGCCACTGC CCAACCTCCGGGTGGTGCGAGGGACCCAGGTCTACGATGGGAAGTTTGCCATCTTTGTCA TGTTGAACTACAACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCTTTACTCAGCTCA CCGAGATTCTGTCAGGAGGTGTTTACATTGAGAAGAACGACAAACTTTGTCACATGGACA CAATCGACTGGAGGGACATTGTGCGGGACAGAGACGCAGAGATAGTGGTGAAGGACAATG GCAGGACTTGTCCCCCCTGTCATGAGGCGTGCAAGGGACGATGCTGGGGTCCTGGACCAG AAGACTGCCAGACATTGACCAAGACGATCTGCGCCCCTCAGTGTAATGGTCACTGCTTTG GGCCCAACCCCAACCAGTGCTGCCATGACGAGTGTGCAGGGGGCTGCTCAGGCCCCCAGG ACACAGACTCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCAACCTCCTCTGCTGCCGCTACCAAGTCGCTGGTGGCTCAGGTGGCTCCGCTTCGATG TCCTAGTCCAGGGGCTCCCCCGGCCGGATTGGGCTGGGCTCCCCTCACCCGCCGCTGGAG TCATGAGGGCGAACCGGGCTCTGCAGGTGCTGGGCTTCCTCCTCAGCCTGGCCCGGGGCT CCGAGGTGGGCAACTCTCAGGCAGTGTGCCCTGGGACTCTGAACGGGCTGAGTGTGACCG GCGATGCTGAGAACCAGTACCAGACCCTGTACAAGCTCTACGAGAGGTGTGAGGTGGTCA TGGGGAACCTGGAGATCGTGCTCACGGGACACAATGCTGACCTCTCCTTTCTGCAGTGGA TCCGAGAAGTGACCGGCTATGTCCTCGTGGCCATGAACGAGTTCTCTACGCTGCCACTGC CCAACCTCCGGGTGGTGCGAGGGACCCAGGTCTACGATGGGAAGTTTGCCATCTTTGTCA TGTTGAACTACAACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCTTTACTCAGCTCA CCGAGATTCTGTCAGGAGGTGTTTACATTGAGAAGAACGACAAACTTTGTCACATGGACA CAATCGACTGGAGGGACATTGTGCGGGACAGAGACGCAGAGATAGTGGTGAAGGACAATG GCAGGACTTGTCCCCCCTGTCATGAGGCGTGCAAGGGACGATGCTGGGGTCCTGGACCAG AAGACTGCCAGACATTGACCAAGACGATCTGCGCCCCTCAGTGTAATGGTCACTGCTTTG GGCCCAACCCCAACCAGTGCTGCCATGACGAGTGTGCAGGGGGCTGCTCAGGCCCCCAGG ACACAGACTCTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 67-186, + strand, RNAz p=0.586341 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 67-186, + strand, RNAz p=0.586341 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC002706, + |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-204, gnl|bosTau2|chr5 (33531851-33531648) | |
| 1-204, gnl|canFam2|chr10 (3387349-3388383) | |
| 1-204, gnl|echTel1|scaffold_325469 (223-1249) | |
| 1-204, gnl|hg17|chr12 (54759539-54760763) | |
| 1-204, gnl|Hg17|chr12 (54760222-54760433) | |
| 1-204, gnl|loxAfr1|scaffold_13800 (8292-9505) | |
| 1-204, gnl|mm7|chr10 (128092078-128090872) | |
| 1-204, gnl|Mm7|chr10 (128091397-128091188) | |
| 1-204, gnl|monDom2|scaffold_234 (520347-521586) | |
| 1-204, gnl|oryCun1|scaffold_213038 (112844-111638) | |
| 1-204, gnl|panTro1|chr10 (56007474-56008690) | |
| 1-204, gnl|rheMac2|chr11 (53137658-53138874) | |
| 1-204, gnl|rn3|chr7 (1878011-1876791) | |
| 354-541, gnl|bosTau2|chr5 (33527605-33527418) | |
| 354-541, gnl|Hg17|chr12 (54765043-54765230) | |
| 354-541, gnl|Mm7|chr10 (128086969-128086782) | |
| 732-849, gnl|bosTau2|chr5 (33525807-33525690) | |
| 732-849, gnl|canFam2|chr10 (3393935-3394078) | |
| 732-849, gnl|danRer3|chr23 (42109476-42109335) | |
| 732-849, gnl|echTel1|scaffold_287766 (42496-42640) | |
| 732-849, gnl|fr1|chrUn (41030398-41030545) | |
| 732-849, gnl|hg17|chr12 (54767829-54767980) | |
| 732-849, gnl|Hg17|chr12 (54767842-54767959) | |
| 732-849, gnl|loxAfr1|scaffold_13800 (15451-15602) | |
| 732-849, gnl|mm7|chr10 (128085271-128085120) | |
| 732-849, gnl|Mm7|chr10 (128085256-128085139) | |
| 732-849, gnl|monDom2|scaffold_234 (527738-527903) | |
| 732-849, gnl|oryCun1|scaffold_213038 (105926-105775) | |
| 732-849, gnl|panTro1|chr10 (56015770-56015931) | |
| 732-849, gnl|rheMac2|chr11 (53145999-53146150) | |
| 732-849, gnl|rn3|chr7 (1871220-1871081) | |
| 732-849, gnl|tetNig1|chr9 (3956967-3957111) | |
| 732-849, gnl|xenTro1|scaffold_85 (2051174-2051322) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-204, gnl|bosTau2|chr5 (33531851-33531648) | |
| 1-204, gnl|canFam2|chr10 (3387349-3388383) | |
| 1-204, gnl|echTel1|scaffold_325469 (223-1249) | |
| 1-204, gnl|hg17|chr12 (54759539-54760763) | |
| 1-204, gnl|Hg17|chr12 (54760222-54760433) | |
| 1-204, gnl|loxAfr1|scaffold_13800 (8292-9505) | |
| 1-204, gnl|mm7|chr10 (128092078-128090872) | |
| 1-204, gnl|Mm7|chr10 (128091397-128091188) | |
| 1-204, gnl|monDom2|scaffold_234 (520347-521586) | |
| 1-204, gnl|oryCun1|scaffold_213038 (112844-111638) | |
| 1-204, gnl|panTro1|chr10 (56007474-56008690) | |
| 1-204, gnl|rheMac2|chr11 (53137658-53138874) | |
| 1-204, gnl|rn3|chr7 (1878011-1876791) | |
| 354-541, gnl|bosTau2|chr5 (33527605-33527418) | |
| 354-541, gnl|Hg17|chr12 (54765043-54765230) | |
| 354-541, gnl|Mm7|chr10 (128086969-128086782) | |
| 732-849, gnl|bosTau2|chr5 (33525807-33525690) | |
| 732-849, gnl|canFam2|chr10 (3393935-3394078) | |
| 732-849, gnl|danRer3|chr23 (42109476-42109335) | |
| 732-849, gnl|echTel1|scaffold_287766 (42496-42640) | |
| 732-849, gnl|fr1|chrUn (41030398-41030545) | |
| 732-849, gnl|hg17|chr12 (54767829-54767980) | |
| 732-849, gnl|Hg17|chr12 (54767842-54767959) | |
| 732-849, gnl|loxAfr1|scaffold_13800 (15451-15602) | |
| 732-849, gnl|mm7|chr10 (128085271-128085120) | |
| 732-849, gnl|Mm7|chr10 (128085256-128085139) | |
| 732-849, gnl|monDom2|scaffold_234 (527738-527903) | |
| 732-849, gnl|oryCun1|scaffold_213038 (105926-105775) | |
| 732-849, gnl|panTro1|chr10 (56015770-56015931) | |
| 732-849, gnl|rheMac2|chr11 (53145999-53146150) | |
| 732-849, gnl|rn3|chr7 (1871220-1871081) | |
| 732-849, gnl|tetNig1|chr9 (3956967-3957111) | |
| 732-849, gnl|xenTro1|scaffold_85 (2051174-2051322) |