Ss1.1-Mixn-0021c12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTTGGCAAGATGGCGCCGGTGGGGGTGGAGAAGAAGCTGCTGCTGGGCCCCAACGGGCC CGCGGTGGCGGCCGCCGGTGACCTAACCAGTGAGGAGGAGGAGGGCCAGAGCCTATGGTC CTCGATCCTGAGCGAGGTGTCCACTCGCGCCAGGTCCAAGTTGCCGTCCGGCAAGAACAT TCTCGTGTTCGGTGAAGATGGTTCTGGTAAAACAACCCTCATGACTAAACTTCAAGGAGC TGAACATGGCAAAAAAGGAAGAGGCCTAGAGTATCTCTACCTCAGCATCCATGACGAGGA CCGAGATGATCACACGCGCTGCAATGTGTGGATTCTGGATGGAGACCTGTACCACAAAGG CTTGCTGAAGTTTGCAGTTTCTGCTGAATCCTTGCCAGAAACCCTGGTCATTTTTGTTGC AGACATGTCTAGGCCTTGGACTGTGATGGAATCTCTGCAGAAATGGGCTAGTGTTTTACG TGAGCACATTGATAAAATGAAAATTCCACCAGAAGAAATGAGGGAGCTGGAACGGAAGTT TATGAAAGATTTTCAAGACTATATCGAGCCTGAGGAAGGTTCTCAAGGTTCCCCACAGAG AAGAGGCCCTCTGACCTCAGGTCCTGATGAAGAAAATGTTGCCCTGCCTCTTGGTGACAA TGTGCTGACTCATAACCTGGGGGTCCCCGTATTGGTAGTGTGCACAAAGTGTGATGCAGT GAGTGTCCTGGAGAAGGAGCATGATTACAGGGACGAGCACTTTGACTTCATCCAGTCACA CCTACGGAGGTTCTGCCTCCAGTATGGAGCGGCCTTGATTTACACATCAGTGAAGGAAGA GAAAAACCTCGACTTGTTGTATAAGTACATTGTTCATAAAACATACGGTTTCCACTTTAC CACGCCTGCCTTAGTTGTGGAAAAGGAAGCAGTTTTTATACCTGCAGGCTGGGACAATGA AAAGAAAATAGCTATTTTACATGAAAATTTCACAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTTGGCAAGATGGCGCCGGTGGGGGTGGAGAAGAAGCTGCTGCTGGGCCCCAACGGGCC CGCGGTGGCGGCCGCCGGTGACCTAACCAGTGAGGAGGAGGAGGGCCAGAGCCTATGGTC CTCGATCCTGAGCGAGGTGTCCACTCGCGCCAGGTCCAAGTTGCCGTCCGGCAAGAACAT TCTCGTGTTCGGTGAAGATGGTTCTGGTAAAACAACCCTCATGACTAAACTTCAAGGAGC TGAACATGGCAAAAAAGGAAGAGGCCTAGAGTATCTCTACCTCAGCATCCATGACGAGGA CCGAGATGATCACACGCGCTGCAATGTGTGGATTCTGGATGGAGACCTGTACCACAAAGG CTTGCTGAAGTTTGCAGTTTCTGCTGAATCCTTGCCAGAAACCCTGGTCATTTTTGTTGC AGACATGTCTAGGCCTTGGACTGTGATGGAATCTCTGCAGAAATGGGCTAGTGTTTTACG TGAGCACATTGATAAAATGAAAATTCCACCAGAAGAAATGAGGGAGCTGGAACGGAAGTT TATGAAAGATTTTCAAGACTATATCGAGCCTGAGGAAGGTTCTCAAGGTTCCCCACAGAG AAGAGGCCCTCTGACCTCAGGTCCTGATGAAGAAAATGTTGCCCTGCCTCTTGGTGACAA TGTGCTGACTCATAACCTGGGGGTCCCCGTATTGGTAGTGTGCACAAAGTGTGATGCAGT GAGTGTCCTGGAGAAGGAGCATGATTACAGGGACGAGCACTTTGACTTCATCCAGTCACA CCTACGGAGGTTCTGCCTCCAGTATGGAGCGGCCTTGATTTACACATCAGTGAAGGAAGA GAAAAACCTCGACTTGTTGTATAAGTACATTGTTCATAAAACATACGGTTTCCACTTTAC CACGCCTGCCTTAGTTGTGGAAAAGGAAGCAGTTTTTATACCTGCAGGCTGGGACAATGA AAAGAAAATAGCTATTTTACATGAAAATTTCACAAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, + strand, RNAz p=0.999812 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, + strand, RNAz p=0.999812 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-119, gnl|bosTau2|chr18 (26717436-26717318) | |
| 1-119, gnl|canFam2|chr23 (15276926-15276785) | |
| 1-119, gnl|danRer3|chr19 (16365691-16365834) | |
| 1-119, gnl|dasNov1|scaffold_72656 (6756-6899) | |
| 1-119, gnl|echTel1|scaffold_255456 (1362-1218) | |
| 1-119, gnl|fr1|chrUn (209152735-209152610) | |
| 1-119, gnl|galGal2|chr2 (39590607-39590739) | |
| 1-119, gnl|hg17|chr16 (65342882-65343025) | |
| 1-119, gnl|Hg17|chr16 (65343005-65342887) | |
| 1-119, gnl|loxAfr1|scaffold_13417 (25369-25512) | |
| 1-119, gnl|mm7|chr8 (103041993-103042134) | |
| 1-119, gnl|Mm7|chr8 (103042114-103041996) | |
| 1-119, gnl|monDom2|scaffold_23 (20830759-20830618) | |
| 1-119, gnl|oryCun1|scaffold_148373 (11277-11420) | |
| 1-119, gnl|panTro1|chr18 (59583688-59583831) | |
| 1-119, gnl|rheMac2|chr20 (65039252-65039395) | |
| 1-119, gnl|rn3|chr19 (469281-469140) | |
| 308-547, gnl|bosTau2|chr18 (26711362-26711123) | |
| 308-547, gnl|canFam2|chr5 (85555272-85555013) | |
| 308-547, gnl|danRer3|chr7 (36218364-36218606) | |
| 308-547, gnl|dasNov1|scaffold_72656 (1379-1630) | |
| 308-547, gnl|echTel1|scaffold_255456 (6927-6676) | |
| 308-547, gnl|fr1|chrUn (209154294-209154027) | |
| 308-547, gnl|galGal2|chr11 (11669880-11669633) | |
| 308-547, gnl|hg17|chr16 (65333837-65334092) | |
| 308-547, gnl|Hg17|chr16 (65334073-65333834) | |
| 308-547, gnl|loxAfr1|scaffold_12224 (55897-56148) | |
| 308-547, gnl|mm7|chr8 (103036661-103036914) | |
| 308-547, gnl|Mm7|chr8 (103036897-103036660) | |
| 308-547, gnl|monDom2|scaffold_23 (20837842-20837593) | |
| 308-547, gnl|oryCun1|scaffold_109944 (10812-11062) | |
| 308-547, gnl|panTro1|chr18 (59574697-59574952) | |
| 308-547, gnl|rheMac2|chr20 (65029978-65030233) | |
| 308-547, gnl|rn3|chr19 (474601-474350) | |
| 308-547, gnl|tetNig1|chr5 (7824870-7825124) | |
| 308-547, gnl|xenTro1|scaffold_13 (1814924-1815177) | |
| 708-992, gnl|bosTau2|chr18 (13651769-13651484) | |
| 708-992, gnl|Hg17|chr3 (32553602-32549540) | |
| 708-992, gnl|Mm7|chr9 (114364604-114366749) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-119, gnl|bosTau2|chr18 (26717436-26717318) | |
| 1-119, gnl|canFam2|chr23 (15276926-15276785) | |
| 1-119, gnl|danRer3|chr19 (16365691-16365834) | |
| 1-119, gnl|dasNov1|scaffold_72656 (6756-6899) | |
| 1-119, gnl|echTel1|scaffold_255456 (1362-1218) | |
| 1-119, gnl|fr1|chrUn (209152735-209152610) | |
| 1-119, gnl|galGal2|chr2 (39590607-39590739) | |
| 1-119, gnl|hg17|chr16 (65342882-65343025) | |
| 1-119, gnl|Hg17|chr16 (65343005-65342887) | |
| 1-119, gnl|loxAfr1|scaffold_13417 (25369-25512) | |
| 1-119, gnl|mm7|chr8 (103041993-103042134) | |
| 1-119, gnl|Mm7|chr8 (103042114-103041996) | |
| 1-119, gnl|monDom2|scaffold_23 (20830759-20830618) | |
| 1-119, gnl|oryCun1|scaffold_148373 (11277-11420) | |
| 1-119, gnl|panTro1|chr18 (59583688-59583831) | |
| 1-119, gnl|rheMac2|chr20 (65039252-65039395) | |
| 1-119, gnl|rn3|chr19 (469281-469140) | |
| 308-547, gnl|bosTau2|chr18 (26711362-26711123) | |
| 308-547, gnl|canFam2|chr5 (85555272-85555013) | |
| 308-547, gnl|danRer3|chr7 (36218364-36218606) | |
| 308-547, gnl|dasNov1|scaffold_72656 (1379-1630) | |
| 308-547, gnl|echTel1|scaffold_255456 (6927-6676) | |
| 308-547, gnl|fr1|chrUn (209154294-209154027) | |
| 308-547, gnl|galGal2|chr11 (11669880-11669633) | |
| 308-547, gnl|hg17|chr16 (65333837-65334092) | |
| 308-547, gnl|Hg17|chr16 (65334073-65333834) | |
| 308-547, gnl|loxAfr1|scaffold_12224 (55897-56148) | |
| 308-547, gnl|mm7|chr8 (103036661-103036914) | |
| 308-547, gnl|Mm7|chr8 (103036897-103036660) | |
| 308-547, gnl|monDom2|scaffold_23 (20837842-20837593) | |
| 308-547, gnl|oryCun1|scaffold_109944 (10812-11062) | |
| 308-547, gnl|panTro1|chr18 (59574697-59574952) | |
| 308-547, gnl|rheMac2|chr20 (65029978-65030233) | |
| 308-547, gnl|rn3|chr19 (474601-474350) | |
| 308-547, gnl|tetNig1|chr5 (7824870-7825124) | |
| 308-547, gnl|xenTro1|scaffold_13 (1814924-1815177) | |
| 708-992, gnl|bosTau2|chr18 (13651769-13651484) | |
| 708-992, gnl|Hg17|chr3 (32553602-32549540) | |
| 708-992, gnl|Mm7|chr9 (114364604-114366749) |