Non-Coding RNA Search

Ss1.1-Mixn-0024k07.5

Sequence:


               
               TATACACACACACATACACACTATATATGTATACGGAGAGAGATTGAGAAAGTAGGAAGA
TCTTTAGATTTACCAAAGTTTCATTATGTTAGTATAAAAGTTTTTAAAAAATTGTTCGTG
CAAATACCTCTTTTCATCAAATTCTGACTTGGGCAAATCCATCTTCATGCTATTTGTCTC
TGAGGGTCTGTTCCTTCCATAGCCCAGGATTGAGGGATATCATTGCAGATTTAGGGACAG
CAGCCTGAAGCTGACATCTCTATGGCTGCCTCTACCTTTTGTCGTCACTCAGTTAAGAAG
GCTGGACTTTCTCTCTTGCAGTGGCTGAACACTTGTTGCTTGGAAGTCCCTTCTTCAGAG
TTCTGTCCTGAGTATATTTCCCGTGACCTGCCTCTGCATCTGGTTAAATGGACTTCAGTA
ATCTATACACCGTTACTTCTTACTTATTTTATATCCAGGAAGATATTAAGTCCAACAAGC
TTTTACCCACCGAGTCTACAGAGAAAACGGCCAGGCAATTTTTGTTTCAATCTCCCTGTC
TCTCTGGAGCAGTAGTTCCAGAGGCTGATCAATAGGTTTTATTGTAGACCTCACTGTCTC
TAAAAGCACTGTGACCTTATCCTGTCTAAAAATAGTATTTGCTCTTGCCTGCAGAACCTT
GACCTGTGAAAACCCATTTGGAACATAACTGACATATCTAGTCAGCTGTGTATCCAAGAC
ATGCTCTGTGAATGAAATCTGTGCAGAACCATCAGGGAGACACTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATACACACACACATACACACTATATATGTATACGGAGAGAGATTGAGAAAGTAGGAAGA
TCTTTAGATTTACCAAAGTTTCATTATGTTAGTATAAAAGTTTTTAAAAAATTGTTCGTG
CAAATACCTCTTTTCATCAAATTCTGACTTGGGCAAATCCATCTTCATGCTATTTGTCTC
TGAGGGTCTGTTCCTTCCATAGCCCAGGATTGAGGGATATCATTGCAGATTTAGGGACAG
CAGCCTGAAGCTGACATCTCTATGGCTGCCTCTACCTTTTGTCGTCACTCAGTTAAGAAG
GCTGGACTTTCTCTCTTGCAGTGGCTGAACACTTGTTGCTTGGAAGTCCCTTCTTCAGAG
TTCTGTCCTGAGTATATTTCCCGTGACCTGCCTCTGCATCTGGTTAAATGGACTTCAGTA
ATCTATACACCGTTACTTCTTACTTATTTTATATCCAGGAAGATATTAAGTCCAACAAGC
TTTTACCCACCGAGTCTACAGAGAAAACGGCCAGGCAATTTTTGTTTCAATCTCCCTGTC
TCTCTGGAGCAGTAGTTCCAGAGGCTGATCAATAGGTTTTATTGTAGACCTCACTGTCTC
TAAAAGCACTGTGACCTTATCCTGTCTAAAAATAGTATTTGCTCTTGCCTGCAGAACCTT
GACCTGTGAAAACCCATTTGGAACATAACTGACATATCTAGTCAGCTGTGTATCCAAGAC
ATGCTCTGTGAATGAAATCTGTGCAGAACCATCAGGGAGACACTTAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               474-593, - strand, RNAz p=0.921568

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               474-593, - strand, RNAz p=0.921568

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-765, gnl|bosTau2|chr11 (29416475-29415713)
               

               
               1-765, gnl|Hg17|chr2 (60662292-60661558)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-765, gnl|bosTau2|chr11 (29416475-29415713)
               

               
               1-765, gnl|Hg17|chr2 (60662292-60661558)

	1-765, gnl\|bosTau2\|chr11 (29416475-29415713)
	1-765, gnl\|Hg17\|chr2 (60662292-60661558)