Ss1.1-Mixn-0024m16.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CTTTTGGTTTCAGTTTTGGGAGGTGATTGGCGAGGAGCACGGGATTGACGGGGGTGGGAG CTACCCCGGGGAATGCTCCGTGCAACTGGAAAGGATCAGCGTGTATTTCAACGAAGCCCC CGGTAGGGTGCTGTTTTCCCTCCTGGGGTTTCGGTGAAAAACAAAACCATTTCCCCCAGG AACAAAATTTTTTCCATGGGCAAGACAGCCCCCCCCCCAAGGATGGGAAGGTTTCTGGTT ACCCAGTTTACAAATGTGGGTGACTGTTGCTGGGGTCAAAAAAACCATTTAAGGCTTTTA CCCAAAACCCCTCGGAGGTTTTTATTTTTTTTTTTTTTTTCCGGACCGGGGTCACAAAGT CCTATCTTGACAAAACATCAGCCTTCAGAAAAACACGGTTACTGACTGCTTCCTCTTCCT CTCCTCAGGTAAGAAATACGTGCCCCGAGCCGTCCTGGTGGACTTGGAACCTGGGACCAT GGACAGCATCCGATCCAGCAGACTGGGAGCCCTCTTCCGGCCCGACAGTTTTGTCCACGG TGGGTTTTTCTGGAAGGTTCCATGAGGAGGAGATGGGCGTGCCTCTTGGTGGGCCCCGCC CCGCCCCTCCTCTGCCCCACGGGAGGTAACCCAGTCCCTTGTGCCACAGGGAACTCTGGG GCCGGCAACAACTGGGCCAAGGGCCACTACACGGAGGGGGCCGAGCTGGTGGAGGGCGTG CTGGACGCCGTGCGCAGCGAGGCCGAGGGCTGCGACTGCCTGCAGGGCTTCCAGGTGGTG CACTCGCTGGGCGGCGGCACGGGGTCCGGGATGGGCACGCTGCTCATGGGCAAGATCCGC GAGGAGTTCCCGGACCGCATCCTCAACTCCTTCAGCGTCATGCCCTCGGCCAAGGTGTCG GACACGGTGGTGGAGCCCTACAACGCCGTGCTGTCCATCCACCAGCTGCTGCAGAACGCC GACGCCTGCTTCTGCATCGACAACGAGGCGCTCTACGACATCTGCTGCCGCACCCTGAGG CTGACCACGCCCACCTACGGCGACCTCAACCACCTGGTGTCGCTGACCATGAGCGGCGTC ACCACGTCGCTGCGCTTCCCCGGCCAGCTCAACGCCGACCTGCGCAAGCTGGCCGTGAAC ATGGTGCCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTCGCGCCGCTCACCGCCCAG GGCAGCCAGCAGTACCGCGCGCTGACCGTGGCCGAGCTCACCCAGCAGATGTTCGACGCC CGCAACACCATGTTCGCGTGCGAC |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CTTTTGGTTTCAGTTTTGGGAGGTGATTGGCGAGGAGCACGGGATTGACGGGGGTGGGAG CTACCCCGGGGAATGCTCCGTGCAACTGGAAAGGATCAGCGTGTATTTCAACGAAGCCCC CGGTAGGGTGCTGTTTTCCCTCCTGGGGTTTCGGTGAAAAACAAAACCATTTCCCCCAGG AACAAAATTTTTTCCATGGGCAAGACAGCCCCCCCCCCAAGGATGGGAAGGTTTCTGGTT ACCCAGTTTACAAATGTGGGTGACTGTTGCTGGGGTCAAAAAAACCATTTAAGGCTTTTA CCCAAAACCCCTCGGAGGTTTTTATTTTTTTTTTTTTTTTCCGGACCGGGGTCACAAAGT CCTATCTTGACAAAACATCAGCCTTCAGAAAAACACGGTTACTGACTGCTTCCTCTTCCT CTCCTCAGGTAAGAAATACGTGCCCCGAGCCGTCCTGGTGGACTTGGAACCTGGGACCAT GGACAGCATCCGATCCAGCAGACTGGGAGCCCTCTTCCGGCCCGACAGTTTTGTCCACGG TGGGTTTTTCTGGAAGGTTCCATGAGGAGGAGATGGGCGTGCCTCTTGGTGGGCCCCGCC CCGCCCCTCCTCTGCCCCACGGGAGGTAACCCAGTCCCTTGTGCCACAGGGAACTCTGGG GCCGGCAACAACTGGGCCAAGGGCCACTACACGGAGGGGGCCGAGCTGGTGGAGGGCGTG CTGGACGCCGTGCGCAGCGAGGCCGAGGGCTGCGACTGCCTGCAGGGCTTCCAGGTGGTG CACTCGCTGGGCGGCGGCACGGGGTCCGGGATGGGCACGCTGCTCATGGGCAAGATCCGC GAGGAGTTCCCGGACCGCATCCTCAACTCCTTCAGCGTCATGCCCTCGGCCAAGGTGTCG GACACGGTGGTGGAGCCCTACAACGCCGTGCTGTCCATCCACCAGCTGCTGCAGAACGCC GACGCCTGCTTCTGCATCGACAACGAGGCGCTCTACGACATCTGCTGCCGCACCCTGAGG CTGACCACGCCCACCTACGGCGACCTCAACCACCTGGTGTCGCTGACCATGAGCGGCGTC ACCACGTCGCTGCGCTTCCCCGGCCAGCTCAACGCCGACCTGCGCAAGCTGGCCGTGAAC ATGGTGCCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTCGCGCCGCTCACCGCCCAG GGCAGCCAGCAGTACCGCGCGCTGACCGTGGCCGAGCTCACCCAGCAGATGTTCGACGCC CGCAACACCATGTTCGCGTGCGAC |
Predicted RNA structure(s): 7 entry(ies) | More info |
Predicted RNA structure(s): 7 entry(ies) | Help | Less info |
Predicted RNA structure(s): 7 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Aligned organism(s): 115 entry(ies) | More info |
Aligned organism(s): 115 entry(ies) | Help | Less info |
658-1284, gnl|bosTau2|chr11 (85446435-85445809) | |
658-1284, gnl|canFam2|chr9 (51759202-51758383) | |
658-1284, gnl|canFam2|chr9 (51758674-51759271) | |
658-1284, gnl|canFam2|chr9 (51759271-51758802) | |
658-1284, gnl|canFam2|chr9 (51758384-51759271) | |
658-1284, gnl|canFam2|chr9 (51758413-51759271) | |
658-1284, gnl|canFam2|chr9 (51759155-51758325) | |
658-1284, gnl|canFam2|chr9 (51758775-51759271) | |
658-1284, gnl|danRer3|chr14 (1298488-1299298) | |
658-1284, gnl|danRer3|chr14 (1299268-1298410) | |
658-1284, gnl|danRer3|chr3 (13746031-13745434) | |
658-1284, gnl|danRer3|chr3 (13745434-13745903) | |
658-1284, gnl|danRer3|chr3 (13746321-13745434) | |
658-1284, gnl|danRer3|chr8 (43291660-43290842) | |
658-1284, gnl|danRer3|chrUn (116265241-116264745) | |
658-1284, gnl|dasNov1|scaffold_181674 (1352-548) | |
658-1284, gnl|dasNov1|scaffold_181674 (839-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (1436-967) | |
658-1284, gnl|dasNov1|scaffold_181674 (549-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (578-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (1320-491) | |
658-1284, gnl|dasNov1|scaffold_181674 (940-1436) | |
658-1284, gnl|echTel1|scaffold_290975 (15048-14244) | |
658-1284, gnl|echTel1|scaffold_290975 (14535-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (15132-14663) | |
658-1284, gnl|echTel1|scaffold_290975 (14245-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (14274-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (15016-14193) | |
658-1284, gnl|echTel1|scaffold_290975 (14636-15132) | |
658-1284, gnl|fr1|chrUn (317519135-317519954) | |
658-1284, gnl|fr1|chrUn (317519663-317519066) | |
658-1284, gnl|fr1|chrUn (317519066-317519535) | |
658-1284, gnl|fr1|chrUn (317519953-317519066) | |
658-1284, gnl|fr1|chrUn (317519924-317519066) | |
658-1284, gnl|fr1|chrUn (127588317-127589137) | |
658-1284, gnl|fr1|chrUn (317519562-317519066) | |
658-1284, gnl|galGal2|chr2 (66043407-66044211) | |
658-1284, gnl|galGal2|chr2 (66043920-66043323) | |
658-1284, gnl|galGal2|chr2 (66059202-66059671) | |
658-1284, gnl|galGal2|chr2 (66044210-66043323) | |
658-1284, gnl|galGal2|chr2 (66044181-66043323) | |
658-1284, gnl|galGal2|chr2 (66043439-66044266) | |
658-1284, gnl|galGal2|chr2 (66043819-66043323) | |
658-1284, gnl|hg17|chr10 (83072-83930) | |
658-1284, gnl|hg17|chr14 (42813787-42814609) | |
658-1284, gnl|hg17|chr18 (37436-38323) | |
658-1284, gnl|hg17|chr4 (113356356-113357171) | |
658-1284, gnl|hg17|chr4 (191279234-191279730) | |
658-1284, gnl|Hg17|chr9 (137412793-137413419) | |
658-1284, gnl|hg17|chrY (18067179-18067774) | |
658-1284, gnl|hg17|chrY (18938262-18938736) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9439-8630) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8921-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9518-9049) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8631-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8660-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9402-8576) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9022-9518) | |
658-1284, gnl|mm7|chr2 (25230486-25229667) | |
658-1284, gnl|mm7|chr2 (25229958-25230555) | |
658-1284, gnl|mm7|chr2 (25230555-25230086) | |
658-1284, gnl|mm7|chr2 (25229668-25230555) | |
658-1284, gnl|mm7|chr2 (25229697-25230555) | |
658-1284, gnl|mm7|chr2 (25230439-25229610) | |
658-1284, gnl|mm7|chr2 (25230059-25230555) | |
658-1284, gnl|Mm7|chr2 (25230671-25230045) | |
658-1284, gnl|monDom2|scaffold_1 (187152059-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187151462-187151931) | |
658-1284, gnl|monDom2|scaffold_1 (187152349-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187152320-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187151578-187152404) | |
658-1284, gnl|monDom2|scaffold_1 (187151958-187151462) | |
658-1284, gnl|monDom2|scaffold_6 (55039771-55038960) | |
658-1284, gnl|oryCun1|scaffold_171688 (2481-3368) | |
658-1284, gnl|oryCun1|scaffold_177399 (30326-29521) | |
658-1284, gnl|oryCun1|scaffold_88098 (9118-8521) | |
658-1284, gnl|oryCun1|scaffold_88098 (8521-8990) | |
658-1284, gnl|oryCun1|scaffold_88098 (9379-8521) | |
658-1284, gnl|oryCun1|scaffold_88098 (8637-9457) | |
658-1284, gnl|oryCun1|scaffold_88098 (9017-8521) | |
658-1284, gnl|panTro1|chr15 (42023010-42023832) | |
658-1284, gnl|panTro1|chr3 (129924551-129925366) | |
658-1284, gnl|panTro1|chrUn_random (32802567-32801685) | |
658-1284, gnl|panTro1|chrUn_random (32802535-32801685) | |
658-1284, gnl|panTro1|chrUn_random (32802181-32801685) | |
658-1284, gnl|panTro1|chrY (18735101-18735694) | |
658-1284, gnl|panTro1|chrY (18735694-18735222) | |
658-1284, gnl|rheMac2|chr10 (61375019-61375614) | |
658-1284, gnl|rheMac2|chr10 (61375614-61375144) | |
658-1284, gnl|rheMac2|chr15 (24692-25578) | |
658-1284, gnl|rheMac2|chr15 (24721-25578) | |
658-1284, gnl|rheMac2|chr5 (104934582-104935389) | |
658-1284, gnl|rheMac2|chr5 (182035344-182035840) | |
658-1284, gnl|rheMac2|chr7 (106415623-106416421) | |
658-1284, gnl|rn3|chr3 (3388061-3387242) | |
658-1284, gnl|rn3|chr3 (3387533-3388130) | |
658-1284, gnl|rn3|chr3 (3388130-3387661) | |
658-1284, gnl|rn3|chr3 (3387243-3388130) | |
658-1284, gnl|rn3|chr3 (3387272-3388130) | |
658-1284, gnl|rn3|chr3 (3388014-3387185) | |
658-1284, gnl|rn3|chr3 (3387634-3388130) | |
658-1284, gnl|tetNig1|chr15 (7069952-7070840) | |
658-1284, gnl|tetNig1|chr15 (7069981-7070840) | |
658-1284, gnl|tetNig1|chr15 (7070343-7070840) | |
658-1284, gnl|tetNig1|chr3 (10892858-10892260) | |
658-1284, gnl|tetNig1|chr3 (10892260-10892729) | |
658-1284, gnl|tetNig1|chr8 (9252127-9252952) | |
658-1284, gnl|tetNig1|chrUn_random (68013294-68014113) | |
658-1284, gnl|xenTro1|scaffold_302 (492796-491977) | |
658-1284, gnl|xenTro1|scaffold_302 (492268-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492865-492396) | |
658-1284, gnl|xenTro1|scaffold_302 (491978-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492007-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492749-491922) | |
658-1284, gnl|xenTro1|scaffold_302 (492369-492865) |
Aligned organism(s): 115 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
658-1284, gnl|bosTau2|chr11 (85446435-85445809) | |
658-1284, gnl|canFam2|chr9 (51759202-51758383) | |
658-1284, gnl|canFam2|chr9 (51758674-51759271) | |
658-1284, gnl|canFam2|chr9 (51759271-51758802) | |
658-1284, gnl|canFam2|chr9 (51758384-51759271) | |
658-1284, gnl|canFam2|chr9 (51758413-51759271) | |
658-1284, gnl|canFam2|chr9 (51759155-51758325) | |
658-1284, gnl|canFam2|chr9 (51758775-51759271) | |
658-1284, gnl|danRer3|chr14 (1298488-1299298) | |
658-1284, gnl|danRer3|chr14 (1299268-1298410) | |
658-1284, gnl|danRer3|chr3 (13746031-13745434) | |
658-1284, gnl|danRer3|chr3 (13745434-13745903) | |
658-1284, gnl|danRer3|chr3 (13746321-13745434) | |
658-1284, gnl|danRer3|chr8 (43291660-43290842) | |
658-1284, gnl|danRer3|chrUn (116265241-116264745) | |
658-1284, gnl|dasNov1|scaffold_181674 (1352-548) | |
658-1284, gnl|dasNov1|scaffold_181674 (839-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (1436-967) | |
658-1284, gnl|dasNov1|scaffold_181674 (549-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (578-1436) | |
658-1284, gnl|dasNov1|scaffold_181674 (1320-491) | |
658-1284, gnl|dasNov1|scaffold_181674 (940-1436) | |
658-1284, gnl|echTel1|scaffold_290975 (15048-14244) | |
658-1284, gnl|echTel1|scaffold_290975 (14535-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (15132-14663) | |
658-1284, gnl|echTel1|scaffold_290975 (14245-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (14274-15132) | |
658-1284, gnl|echTel1|scaffold_290975 (15016-14193) | |
658-1284, gnl|echTel1|scaffold_290975 (14636-15132) | |
658-1284, gnl|fr1|chrUn (317519135-317519954) | |
658-1284, gnl|fr1|chrUn (317519663-317519066) | |
658-1284, gnl|fr1|chrUn (317519066-317519535) | |
658-1284, gnl|fr1|chrUn (317519953-317519066) | |
658-1284, gnl|fr1|chrUn (317519924-317519066) | |
658-1284, gnl|fr1|chrUn (127588317-127589137) | |
658-1284, gnl|fr1|chrUn (317519562-317519066) | |
658-1284, gnl|galGal2|chr2 (66043407-66044211) | |
658-1284, gnl|galGal2|chr2 (66043920-66043323) | |
658-1284, gnl|galGal2|chr2 (66059202-66059671) | |
658-1284, gnl|galGal2|chr2 (66044210-66043323) | |
658-1284, gnl|galGal2|chr2 (66044181-66043323) | |
658-1284, gnl|galGal2|chr2 (66043439-66044266) | |
658-1284, gnl|galGal2|chr2 (66043819-66043323) | |
658-1284, gnl|hg17|chr10 (83072-83930) | |
658-1284, gnl|hg17|chr14 (42813787-42814609) | |
658-1284, gnl|hg17|chr18 (37436-38323) | |
658-1284, gnl|hg17|chr4 (113356356-113357171) | |
658-1284, gnl|hg17|chr4 (191279234-191279730) | |
658-1284, gnl|Hg17|chr9 (137412793-137413419) | |
658-1284, gnl|hg17|chrY (18067179-18067774) | |
658-1284, gnl|hg17|chrY (18938262-18938736) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9439-8630) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8921-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9518-9049) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8631-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (8660-9518) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9402-8576) | |
658-1284, gnl|loxAfr1|scaffold_35025 (9022-9518) | |
658-1284, gnl|mm7|chr2 (25230486-25229667) | |
658-1284, gnl|mm7|chr2 (25229958-25230555) | |
658-1284, gnl|mm7|chr2 (25230555-25230086) | |
658-1284, gnl|mm7|chr2 (25229668-25230555) | |
658-1284, gnl|mm7|chr2 (25229697-25230555) | |
658-1284, gnl|mm7|chr2 (25230439-25229610) | |
658-1284, gnl|mm7|chr2 (25230059-25230555) | |
658-1284, gnl|Mm7|chr2 (25230671-25230045) | |
658-1284, gnl|monDom2|scaffold_1 (187152059-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187151462-187151931) | |
658-1284, gnl|monDom2|scaffold_1 (187152349-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187152320-187151462) | |
658-1284, gnl|monDom2|scaffold_1 (187151578-187152404) | |
658-1284, gnl|monDom2|scaffold_1 (187151958-187151462) | |
658-1284, gnl|monDom2|scaffold_6 (55039771-55038960) | |
658-1284, gnl|oryCun1|scaffold_171688 (2481-3368) | |
658-1284, gnl|oryCun1|scaffold_177399 (30326-29521) | |
658-1284, gnl|oryCun1|scaffold_88098 (9118-8521) | |
658-1284, gnl|oryCun1|scaffold_88098 (8521-8990) | |
658-1284, gnl|oryCun1|scaffold_88098 (9379-8521) | |
658-1284, gnl|oryCun1|scaffold_88098 (8637-9457) | |
658-1284, gnl|oryCun1|scaffold_88098 (9017-8521) | |
658-1284, gnl|panTro1|chr15 (42023010-42023832) | |
658-1284, gnl|panTro1|chr3 (129924551-129925366) | |
658-1284, gnl|panTro1|chrUn_random (32802567-32801685) | |
658-1284, gnl|panTro1|chrUn_random (32802535-32801685) | |
658-1284, gnl|panTro1|chrUn_random (32802181-32801685) | |
658-1284, gnl|panTro1|chrY (18735101-18735694) | |
658-1284, gnl|panTro1|chrY (18735694-18735222) | |
658-1284, gnl|rheMac2|chr10 (61375019-61375614) | |
658-1284, gnl|rheMac2|chr10 (61375614-61375144) | |
658-1284, gnl|rheMac2|chr15 (24692-25578) | |
658-1284, gnl|rheMac2|chr15 (24721-25578) | |
658-1284, gnl|rheMac2|chr5 (104934582-104935389) | |
658-1284, gnl|rheMac2|chr5 (182035344-182035840) | |
658-1284, gnl|rheMac2|chr7 (106415623-106416421) | |
658-1284, gnl|rn3|chr3 (3388061-3387242) | |
658-1284, gnl|rn3|chr3 (3387533-3388130) | |
658-1284, gnl|rn3|chr3 (3388130-3387661) | |
658-1284, gnl|rn3|chr3 (3387243-3388130) | |
658-1284, gnl|rn3|chr3 (3387272-3388130) | |
658-1284, gnl|rn3|chr3 (3388014-3387185) | |
658-1284, gnl|rn3|chr3 (3387634-3388130) | |
658-1284, gnl|tetNig1|chr15 (7069952-7070840) | |
658-1284, gnl|tetNig1|chr15 (7069981-7070840) | |
658-1284, gnl|tetNig1|chr15 (7070343-7070840) | |
658-1284, gnl|tetNig1|chr3 (10892858-10892260) | |
658-1284, gnl|tetNig1|chr3 (10892260-10892729) | |
658-1284, gnl|tetNig1|chr8 (9252127-9252952) | |
658-1284, gnl|tetNig1|chrUn_random (68013294-68014113) | |
658-1284, gnl|xenTro1|scaffold_302 (492796-491977) | |
658-1284, gnl|xenTro1|scaffold_302 (492268-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492865-492396) | |
658-1284, gnl|xenTro1|scaffold_302 (491978-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492007-492865) | |
658-1284, gnl|xenTro1|scaffold_302 (492749-491922) | |
658-1284, gnl|xenTro1|scaffold_302 (492369-492865) |