Ss1.1-Mixn-0025d06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCGTCCTCGTCCACCTCCACCTCCATGGCCGTCGCGGTGGCCTCGGGCTCCGCGCCCG CCGGCGGCCCGGGGCCAGGCCGCACCCCCGCCCCCGTGCAGATGAACCTGTACGCCACCT GGGAGGTGGACCGGAGCTCGTCCAGCTGCGTGCCCAGGCTGTTCAGCTTGACCCTGAAGA AACTCGTCATGCTAAAAGAAATGGACAAAGATCTTAACTCAGTGGTCATTGCGGTGAAGC TGCAGGGTTCAAAAAGGATCCTTCGCTCCAACGAGATCATCCTTCCAGCTAGTGGGCTGG TGGAAACAGAGCTGCAGTTAACCTTCTCGCTCCAGTACCCCCACTTCCTGAAGCGAGACG CCAACAAGCTGCAGATCATGTTGCAGAGGAGGAAGCGTTACAAGAACCGGACCATCCTGG GCTACAAGACCCTGGCCGTGGGGCTCATCAACATGGCAGAGGTGATGCAGCACCCGAACG AAGGCGCCCTGGTGCTCGGCCTGCACAGCAACGTGAAGGACGTGTCCGTGCCTGTGGCAG AAATAAAGATCTACTCCCTGTCCAGCCAGCCCATTGACCACGAGGGCATCAAGTCCAAGC TGTCTGACCGTTCCCCTGACATTGACAATTACTCGGAGGAGGAGGAGGAGAGCTTCTCGT CCGAACAGGAGGGCAGCGACGACCCACTGCACGGCCAGGTAACCTCCCACCGCCCTCCCC TAAAGCGTCCGAGAAGCAACCCCAGCCGCTGCTGGCGTCTCCAGCCCCTTCCATCCCCTG CCCACCAGGACCTGTTCTACGAAGACGAGGATCTGCGGAAAGTCAAGAAGACCCGGAGGA AACTCACCTCGGCCTCCGCCATCACCAGGCAACCTAACATCAAACAGAAGTTCGTGGCCC TGCTGAAGCGGTTTAAAGTTTCAGACGAGGTGGGCTTCGGGCTGGAACACGTATCCCGGG AACAGATACGGGAAGTGGAAGAGGACTTGGACGAGCTCTATGACAGTCTGGAGATGTACA ACCCCAGCGACAGTGGCCCCGAGATGGAGGAGACGGAGAGCATCCTTAGCACACCGAAGC CCAAGCTCAAGCCGTTCTTTGAAGGGATGTCGCAGTCCAGCTCACAGACGGAGATTGGCA GCCTCAACAGCAAGGGGAGCCTCGGCAAGGACACCACCAGCCCTAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCGTCCTCGTCCACCTCCACCTCCATGGCCGTCGCGGTGGCCTCGGGCTCCGCGCCCG CCGGCGGCCCGGGGCCAGGCCGCACCCCCGCCCCCGTGCAGATGAACCTGTACGCCACCT GGGAGGTGGACCGGAGCTCGTCCAGCTGCGTGCCCAGGCTGTTCAGCTTGACCCTGAAGA AACTCGTCATGCTAAAAGAAATGGACAAAGATCTTAACTCAGTGGTCATTGCGGTGAAGC TGCAGGGTTCAAAAAGGATCCTTCGCTCCAACGAGATCATCCTTCCAGCTAGTGGGCTGG TGGAAACAGAGCTGCAGTTAACCTTCTCGCTCCAGTACCCCCACTTCCTGAAGCGAGACG CCAACAAGCTGCAGATCATGTTGCAGAGGAGGAAGCGTTACAAGAACCGGACCATCCTGG GCTACAAGACCCTGGCCGTGGGGCTCATCAACATGGCAGAGGTGATGCAGCACCCGAACG AAGGCGCCCTGGTGCTCGGCCTGCACAGCAACGTGAAGGACGTGTCCGTGCCTGTGGCAG AAATAAAGATCTACTCCCTGTCCAGCCAGCCCATTGACCACGAGGGCATCAAGTCCAAGC TGTCTGACCGTTCCCCTGACATTGACAATTACTCGGAGGAGGAGGAGGAGAGCTTCTCGT CCGAACAGGAGGGCAGCGACGACCCACTGCACGGCCAGGTAACCTCCCACCGCCCTCCCC TAAAGCGTCCGAGAAGCAACCCCAGCCGCTGCTGGCGTCTCCAGCCCCTTCCATCCCCTG CCCACCAGGACCTGTTCTACGAAGACGAGGATCTGCGGAAAGTCAAGAAGACCCGGAGGA AACTCACCTCGGCCTCCGCCATCACCAGGCAACCTAACATCAAACAGAAGTTCGTGGCCC TGCTGAAGCGGTTTAAAGTTTCAGACGAGGTGGGCTTCGGGCTGGAACACGTATCCCGGG AACAGATACGGGAAGTGGAAGAGGACTTGGACGAGCTCTATGACAGTCTGGAGATGTACA ACCCCAGCGACAGTGGCCCCGAGATGGAGGAGACGGAGAGCATCCTTAGCACACCGAAGC CCAAGCTCAAGCCGTTCTTTGAAGGGATGTCGCAGTCCAGCTCACAGACGGAGATTGGCA GCCTCAACAGCAAGGGGAGCCTCGGCAAGGACACCACCAGCCCTAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 1-158, gnl|bosTau2|chr29 (38894213-38894370) | |
| 1-158, gnl|Hg17|chr11 (65594733-65594890) | |
| 1-158, gnl|Mm7|chr19 (5167501-5167344) | |
| 333-465, gnl|bosTau2|chr21 (49462249-49462117) | |
| 333-465, gnl|canFam2|chr8 (75748598-75748748) | |
| 333-465, gnl|danRer3|chr13 (39142648-39142509) | |
| 333-465, gnl|dasNov1|scaffold_133358 (1487-1640) | |
| 333-465, gnl|echTel1|scaffold_184634 (2762-2917) | |
| 333-465, gnl|fr1|chrUn (2814003-2814150) | |
| 333-465, gnl|galGal2|chr8 (4040170-4039984) | |
| 333-465, gnl|hg17|chr14 (104892397-104892584) | |
| 333-465, gnl|Hg17|chr14 (104892431-104892563) | |
| 333-465, gnl|loxAfr1|scaffold_2355 (12390-12237) | |
| 333-465, gnl|mm7|chr12 (110571962-110572120) | |
| 333-465, gnl|Mm7|chr12 (110571971-110572103) | |
| 333-465, gnl|monDom2|scaffold_6 (103977491-103977354) | |
| 333-465, gnl|oryCun1|scaffold_68844 (1571-1715) | |
| 333-465, gnl|panTro1|chr15 (105570422-105570609) | |
| 333-465, gnl|rheMac2|chr7 (168711873-168712060) | |
| 333-465, gnl|rn3|chr6 (138063205-138063349) | |
| 333-465, gnl|tetNig1|chr10 (11362841-11362971) | |
| 333-465, gnl|xenTro1|scaffold_1983 (52995-52808) | |
| 606-869, gnl|bosTau2|chr29 (39018243-39018527) | |
| 606-869, gnl|Hg17|chr11 (65740566-65740822) | |
| 606-869, gnl|Mm7|chr19 (5050754-5050495) | |
| 944-1089, gnl|bosTau2|chr21 (49455770-49455625) | |
| 944-1089, gnl|canFam2|chr8 (75754665-75754857) | |
| 944-1089, gnl|danRer3|chr13 (39131185-39131017) | |
| 944-1089, gnl|dasNov1|scaffold_8082 (32740-32561) | |
| 944-1089, gnl|echTel1|scaffold_184634 (10665-10855) | |
| 944-1089, gnl|fr1|chrUn (2815246-2815421) | |
| 944-1089, gnl|galGal2|chr8 (4032205-4032008) | |
| 944-1089, gnl|hg17|chr14 (104914125-104914320) | |
| 944-1089, gnl|Hg17|chr14 (104914161-104914306) | |
| 944-1089, gnl|loxAfr1|scaffold_2355 (5504-5328) | |
| 944-1089, gnl|mm7|chr12 (110581727-110581924) | |
| 944-1089, gnl|Mm7|chr12 (110581766-110581911) | |
| 944-1089, gnl|monDom2|scaffold_107 (2713952-2713770) | |
| 944-1089, gnl|oryCun1|scaffold_94596 (182-15) | |
| 944-1089, gnl|panTro1|chr15 (105592465-105592660) | |
| 944-1089, gnl|rheMac2|chr7 (168734220-168734415) | |
| 944-1089, gnl|rn3|chr6 (138072428-138072621) | |
| 944-1089, gnl|tetNig1|chr10 (11363991-11364162) | |
| 944-1089, gnl|xenTro1|scaffold_1046 (154031-153867) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-158, gnl|bosTau2|chr29 (38894213-38894370) | |
| 1-158, gnl|Hg17|chr11 (65594733-65594890) | |
| 1-158, gnl|Mm7|chr19 (5167501-5167344) | |
| 333-465, gnl|bosTau2|chr21 (49462249-49462117) | |
| 333-465, gnl|canFam2|chr8 (75748598-75748748) | |
| 333-465, gnl|danRer3|chr13 (39142648-39142509) | |
| 333-465, gnl|dasNov1|scaffold_133358 (1487-1640) | |
| 333-465, gnl|echTel1|scaffold_184634 (2762-2917) | |
| 333-465, gnl|fr1|chrUn (2814003-2814150) | |
| 333-465, gnl|galGal2|chr8 (4040170-4039984) | |
| 333-465, gnl|hg17|chr14 (104892397-104892584) | |
| 333-465, gnl|Hg17|chr14 (104892431-104892563) | |
| 333-465, gnl|loxAfr1|scaffold_2355 (12390-12237) | |
| 333-465, gnl|mm7|chr12 (110571962-110572120) | |
| 333-465, gnl|Mm7|chr12 (110571971-110572103) | |
| 333-465, gnl|monDom2|scaffold_6 (103977491-103977354) | |
| 333-465, gnl|oryCun1|scaffold_68844 (1571-1715) | |
| 333-465, gnl|panTro1|chr15 (105570422-105570609) | |
| 333-465, gnl|rheMac2|chr7 (168711873-168712060) | |
| 333-465, gnl|rn3|chr6 (138063205-138063349) | |
| 333-465, gnl|tetNig1|chr10 (11362841-11362971) | |
| 333-465, gnl|xenTro1|scaffold_1983 (52995-52808) | |
| 606-869, gnl|bosTau2|chr29 (39018243-39018527) | |
| 606-869, gnl|Hg17|chr11 (65740566-65740822) | |
| 606-869, gnl|Mm7|chr19 (5050754-5050495) | |
| 944-1089, gnl|bosTau2|chr21 (49455770-49455625) | |
| 944-1089, gnl|canFam2|chr8 (75754665-75754857) | |
| 944-1089, gnl|danRer3|chr13 (39131185-39131017) | |
| 944-1089, gnl|dasNov1|scaffold_8082 (32740-32561) | |
| 944-1089, gnl|echTel1|scaffold_184634 (10665-10855) | |
| 944-1089, gnl|fr1|chrUn (2815246-2815421) | |
| 944-1089, gnl|galGal2|chr8 (4032205-4032008) | |
| 944-1089, gnl|hg17|chr14 (104914125-104914320) | |
| 944-1089, gnl|Hg17|chr14 (104914161-104914306) | |
| 944-1089, gnl|loxAfr1|scaffold_2355 (5504-5328) | |
| 944-1089, gnl|mm7|chr12 (110581727-110581924) | |
| 944-1089, gnl|Mm7|chr12 (110581766-110581911) | |
| 944-1089, gnl|monDom2|scaffold_107 (2713952-2713770) | |
| 944-1089, gnl|oryCun1|scaffold_94596 (182-15) | |
| 944-1089, gnl|panTro1|chr15 (105592465-105592660) | |
| 944-1089, gnl|rheMac2|chr7 (168734220-168734415) | |
| 944-1089, gnl|rn3|chr6 (138072428-138072621) | |
| 944-1089, gnl|tetNig1|chr10 (11363991-11364162) | |
| 944-1089, gnl|xenTro1|scaffold_1046 (154031-153867) |