Non-Coding RNA Search

Ss1.1-Mixn-0027f10.5

Sequence:


               
               GAGGCCCCCCGGCTGAGGACGTTTACGAAGGCGTGCTCCGTCTGCTTCTCTGGCCGGTCC
TGCTCCAGCGGGAAGTGGCGGAAGGCCCCCCAGGCTCCGTCCCGGTAGACGTTCATCACC
AGGTCCCCCTGCAGCACCTTCTGCAGCTCCGAGGAGCTCGGGTGCATCTCAGGGGCGGGC
GACGTGCTGCTGAGGTTGGACACCAGGACGCACCGAATGCGGTGGCCGCCGGGCTCTTTT
CGGAGACAGTTCACCATGCCCACGACGCCCGAGGTGCTGCAGCCGACAGCCATCAGCCAC
ACCGGCCGGGAGGAGGCGTCGGCCAGGATGTCCTTCAGTGAGTCGACCCAACGGAAGCTA
GTGTCTTCCACGGACAGGAAGACGGGGCTGTCCTGTGGGGTCTGCTGGCGGCACAGGAAG
AGCACGGAGCCGTAGAAGGACCTCTTCAGGGCCACCAGGTGCAGGGACGCCCCAGCGAAC
AGGCTCTCCCACTGGTCCTGGCTCAGGAGGTGCCTGCCGCCTTGCTCAGGGGAGGTGAGG
AAGCCGACCATCTCCCCGAGGGGGTGTCCTGCGAGCAGCGTGTGCAGCAGCAGGAAGCCC
CCCTCCTTCAGGGTGGCTGCCATGTTGCCAACAGCCACAGCCGGGTCGCCGAGGGTGGCC
AGGGCACAGTTGCACACCAGGAGGTCAGCCTTGCCCAGGCTGCCAGGGGCTGGGTTGGCG
GGGTCCCACTGGCCCTGGGTCACGTGGAGCTGCTCCAGCTTGGCCTGGGCGGCCTCCAGG
GCCTGCGGGTTGCGGTCAGTGGCCGTGTAGTCCAGATCGCGGGCGGCCGCTCGCGATCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCCCCCCGGCTGAGGACGTTTACGAAGGCGTGCTCCGTCTGCTTCTCTGGCCGGTCC
TGCTCCAGCGGGAAGTGGCGGAAGGCCCCCCAGGCTCCGTCCCGGTAGACGTTCATCACC
AGGTCCCCCTGCAGCACCTTCTGCAGCTCCGAGGAGCTCGGGTGCATCTCAGGGGCGGGC
GACGTGCTGCTGAGGTTGGACACCAGGACGCACCGAATGCGGTGGCCGCCGGGCTCTTTT
CGGAGACAGTTCACCATGCCCACGACGCCCGAGGTGCTGCAGCCGACAGCCATCAGCCAC
ACCGGCCGGGAGGAGGCGTCGGCCAGGATGTCCTTCAGTGAGTCGACCCAACGGAAGCTA
GTGTCTTCCACGGACAGGAAGACGGGGCTGTCCTGTGGGGTCTGCTGGCGGCACAGGAAG
AGCACGGAGCCGTAGAAGGACCTCTTCAGGGCCACCAGGTGCAGGGACGCCCCAGCGAAC
AGGCTCTCCCACTGGTCCTGGCTCAGGAGGTGCCTGCCGCCTTGCTCAGGGGAGGTGAGG
AAGCCGACCATCTCCCCGAGGGGGTGTCCTGCGAGCAGCGTGTGCAGCAGCAGGAAGCCC
CCCTCCTTCAGGGTGGCTGCCATGTTGCCAACAGCCACAGCCGGGTCGCCGAGGGTGGCC
AGGGCACAGTTGCACACCAGGAGGTCAGCCTTGCCCAGGCTGCCAGGGGCTGGGTTGGCG
GGGTCCCACTGGCCCTGGGTCACGTGGAGCTGCTCCAGCTTGGCCTGGGCGGCCTCCAGG
GCCTGCGGGTTGCGGTCAGTGGCCGTGTAGTCCAGATCGCGGGCGGCCGCTCGCGATCTA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               314-500, gnl|bosTau2|chr19 (44287242-44287429)
               

               
               314-500, gnl|canFam2|chr9 (3243317-3243104)
               

               
               314-500, gnl|danRer3|chr12 (31293306-31293481)
               

               
               314-500, gnl|echTel1|scaffold_301289 (3560-3781)
               

               
               314-500, gnl|fr1|chrUn (240822689-240822491)
               

               
               314-500, gnl|galGal2|chr18 (4734927-4734754)
               

               
               314-500, gnl|hg17|chr17 (77636381-77636593)
               

               
               314-500, gnl|Hg17|chr17 (77636385-77636570)
               

               
               314-500, gnl|loxAfr1|scaffold_120495 (5152-5359)
               

               
               314-500, gnl|mm7|chr11 (120922427-120922646)
               

               
               314-500, gnl|Mm7|chr11 (120922447-120922618)
               

               
               314-500, gnl|monDom2|scaffold_18 (15671982-15672177)
               

               
               314-500, gnl|panTro1|chr19 (81401258-81401470)
               

               
               314-500, gnl|rheMac2|chr16 (77556401-77556613)
               

               
               314-500, gnl|tetNig1|chrUn_random (51802684-51802869)
               

               
               314-500, gnl|xenTro1|scaffold_413 (900223-900437)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               314-500, gnl|bosTau2|chr19 (44287242-44287429)
               

               
               314-500, gnl|canFam2|chr9 (3243317-3243104)
               

               
               314-500, gnl|danRer3|chr12 (31293306-31293481)
               

               
               314-500, gnl|echTel1|scaffold_301289 (3560-3781)
               

               
               314-500, gnl|fr1|chrUn (240822689-240822491)
               

               
               314-500, gnl|galGal2|chr18 (4734927-4734754)
               

               
               314-500, gnl|hg17|chr17 (77636381-77636593)
               

               
               314-500, gnl|Hg17|chr17 (77636385-77636570)
               

               
               314-500, gnl|loxAfr1|scaffold_120495 (5152-5359)
               

               
               314-500, gnl|mm7|chr11 (120922427-120922646)
               

               
               314-500, gnl|Mm7|chr11 (120922447-120922618)
               

               
               314-500, gnl|monDom2|scaffold_18 (15671982-15672177)
               

               
               314-500, gnl|panTro1|chr19 (81401258-81401470)
               

               
               314-500, gnl|rheMac2|chr16 (77556401-77556613)
               

               
               314-500, gnl|tetNig1|chrUn_random (51802684-51802869)
               

               
               314-500, gnl|xenTro1|scaffold_413 (900223-900437)

	314-500, gnl\|bosTau2\|chr19 (44287242-44287429)
	314-500, gnl\|canFam2\|chr9 (3243317-3243104)
	314-500, gnl\|danRer3\|chr12 (31293306-31293481)
	314-500, gnl\|echTel1\|scaffold_301289 (3560-3781)
	314-500, gnl\|fr1\|chrUn (240822689-240822491)
	314-500, gnl\|galGal2\|chr18 (4734927-4734754)
	314-500, gnl\|hg17\|chr17 (77636381-77636593)
	314-500, gnl\|Hg17\|chr17 (77636385-77636570)
	314-500, gnl\|loxAfr1\|scaffold_120495 (5152-5359)
	314-500, gnl\|mm7\|chr11 (120922427-120922646)
	314-500, gnl\|Mm7\|chr11 (120922447-120922618)
	314-500, gnl\|monDom2\|scaffold_18 (15671982-15672177)
	314-500, gnl\|panTro1\|chr19 (81401258-81401470)
	314-500, gnl\|rheMac2\|chr16 (77556401-77556613)
	314-500, gnl\|tetNig1\|chrUn_random (51802684-51802869)
	314-500, gnl\|xenTro1\|scaffold_413 (900223-900437)