Non-Coding RNA Search

Ss1.1-Mixn-0030e21.5

Sequence:


               
               CCAGCACGTTCATGTGCTCCCAGGCGTGTGCCAGGTGTTCGCCGAGGCGCTGCAGGCCTT
CGGGGTGCGCTTCACCAGGCTGCCGCTGGAGCGCGGGGTGGGCAGCTGCACTTGGCTCGA
ACGTTGTCCCCACCCCCATCTGGCCTTGCCCTGCCCATCGTGGTCCTGTGGTCCCTGCTC
CTGATGCCCCTGCATCCGTAGGTGGACCGATGCCTTCATGGGTCTGAGCACCTGTGGCCG
GCACATGTCTGCTCACCGTGTATCAGGGGCACTAGCTCGGGCCCTGGAAGGTATACCTCC
ACGCCGTGCAGTGACGGCCGAGCTGATGGCGCACCCGGGCTACCCGAGTGTGCCTCCAGC
TGGGGGCTGCGGTGAGGGCCCTGATGCCTTTTCCTGCTCTTGGGAGCGGCTGCACGAGCT
GCGCGTCCTCACCGCCCCGGCGCTGCGGGCTCGACTTGCCCAGGACGGCGTGCAACTCTG
TGCCCTTGACGACCTAGACTCCAAGAAGTCCAGAGAGGGGAAGCCTAATGAAGCCACTCT
GGAAACCTTGCTGGAGCCCTCCTCACCATGACCCTGGCAAAGCAGGCTGTGACTTCCTGG
GCTGGACTCTGCCATCTCTGTACGCAGGTCCTGATGGCTCAGAGCTTCCGCAAGCCCTCT
GGCTGCGGGTAGCAGCGGTGACCTCTGGGCCTGGGGCCTTCCAAGCACTGGGGGCTTTCT
TGGTGCCATGTAAGCATCTTCCTTGGGCAGAGATGACTAATAAAGTAACATGTGTCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGCACGTTCATGTGCTCCCAGGCGTGTGCCAGGTGTTCGCCGAGGCGCTGCAGGCCTT
CGGGGTGCGCTTCACCAGGCTGCCGCTGGAGCGCGGGGTGGGCAGCTGCACTTGGCTCGA
ACGTTGTCCCCACCCCCATCTGGCCTTGCCCTGCCCATCGTGGTCCTGTGGTCCCTGCTC
CTGATGCCCCTGCATCCGTAGGTGGACCGATGCCTTCATGGGTCTGAGCACCTGTGGCCG
GCACATGTCTGCTCACCGTGTATCAGGGGCACTAGCTCGGGCCCTGGAAGGTATACCTCC
ACGCCGTGCAGTGACGGCCGAGCTGATGGCGCACCCGGGCTACCCGAGTGTGCCTCCAGC
TGGGGGCTGCGGTGAGGGCCCTGATGCCTTTTCCTGCTCTTGGGAGCGGCTGCACGAGCT
GCGCGTCCTCACCGCCCCGGCGCTGCGGGCTCGACTTGCCCAGGACGGCGTGCAACTCTG
TGCCCTTGACGACCTAGACTCCAAGAAGTCCAGAGAGGGGAAGCCTAATGAAGCCACTCT
GGAAACCTTGCTGGAGCCCTCCTCACCATGACCCTGGCAAAGCAGGCTGTGACTTCCTGG
GCTGGACTCTGCCATCTCTGTACGCAGGTCCTGATGGCTCAGAGCTTCCGCAAGCCCTCT
GGCTGCGGGTAGCAGCGGTGACCTCTGGGCCTGGGGCCTTCCAAGCACTGGGGGCTTTCT
TGGTGCCATGTAAGCATCTTCCTTGGGCAGAGATGACTAATAAAGTAACATGTGTCCTGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|62078461|ref|NP_001013885.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62078461|ref|NP_001013885.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               16-120, gnl|bosTau2|chr17 (45417926-45417822)
               

               
               16-120, gnl|Hg17|chr22 (20308038-20307934)
               

               
               16-120, gnl|Mm7|chr16 (16697521-16697626)
               


               
               140-599, gnl|bosTau2|chr17 (45417605-45417149)
               

               
               140-599, gnl|Hg17|chr22 (20307700-20307234)
               

               
               140-599, gnl|Mm7|chr16 (16697834-16698288)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-120, gnl|bosTau2|chr17 (45417926-45417822)
               

               
               16-120, gnl|Hg17|chr22 (20308038-20307934)
               

               
               16-120, gnl|Mm7|chr16 (16697521-16697626)
               


               
               140-599, gnl|bosTau2|chr17 (45417605-45417149)
               

               
               140-599, gnl|Hg17|chr22 (20307700-20307234)
               

               
               140-599, gnl|Mm7|chr16 (16697834-16698288)

	16-120, gnl\|bosTau2\|chr17 (45417926-45417822)
	16-120, gnl\|Hg17\|chr22 (20308038-20307934)
	16-120, gnl\|Mm7\|chr16 (16697521-16697626)

	140-599, gnl\|bosTau2\|chr17 (45417605-45417149)
	140-599, gnl\|Hg17\|chr22 (20307700-20307234)
	140-599, gnl\|Mm7\|chr16 (16697834-16698288)