Ss1.1-Mixn-0030g12.5
|
CCCAACTACCCTGGGCAGAGGATGCCCAGCCAGCCGAGCACCGGGCAGTACCCGCCCCCC
ACAGTCAACATGGGGCAGTATTACAAGCCAGAGCAGTTTAATGGACAAAATAACACCTTC
TCTGGAAGCAGCTACAGCAACTACAGCCAAGGGAATGTCAATAGGCCTCCCAGGCCAGTT
CCCGTGGCAAATTACCCCCACTCACCTGTTCCAGGGAACCCTACGCCCCCCATGACCCCT
GGGAGTAGCATCCCCCCATACCTGTCCCCCAGCCAAGATGTTAAACCACCCTTCCCACCG
GACATCAAGCCAAATATGAGCGCTCTACCACCACCCCCAGCCAACCACAATGACGAGCTG
CGGCTCACATTCCCCGTGCGCGATGGTGTGGTGCTGGAGCCCTTCCGCCTGGAGCACAAC
CTGGCCGTCAGCAACCACGTCTTTCACCTGCGGCCCACGGTCCACCAGACGCTGATGTGG
AGGTCTGACCTGGAGCTGCAATTCAAGTGCTACCACCACGAGGACCGGCAGATGAACACC
AACTGGCCGGCCTCAGTGCAGGTCAGCGTCAATGCCACGCCCCTCACCATCGAGCGCGGC
GACAACAAGACGTCCCACAAGCCCCTGCACCTCAAGCATGTGTGCCAGCCTGGCCGCAAC
ACCATCCAGATCACTGTCACAGCCTGCTGCTGCTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCAACTACCCTGGGCAGAGGATGCCCAGCCAGCCGAGCACCGGGCAGTACCCGCCCCCC
ACAGTCAACATGGGGCAGTATTACAAGCCAGAGCAGTTTAATGGACAAAATAACACCTTC
TCTGGAAGCAGCTACAGCAACTACAGCCAAGGGAATGTCAATAGGCCTCCCAGGCCAGTT
CCCGTGGCAAATTACCCCCACTCACCTGTTCCAGGGAACCCTACGCCCCCCATGACCCCT
GGGAGTAGCATCCCCCCATACCTGTCCCCCAGCCAAGATGTTAAACCACCCTTCCCACCG
GACATCAAGCCAAATATGAGCGCTCTACCACCACCCCCAGCCAACCACAATGACGAGCTG
CGGCTCACATTCCCCGTGCGCGATGGTGTGGTGCTGGAGCCCTTCCGCCTGGAGCACAAC
CTGGCCGTCAGCAACCACGTCTTTCACCTGCGGCCCACGGTCCACCAGACGCTGATGTGG
AGGTCTGACCTGGAGCTGCAATTCAAGTGCTACCACCACGAGGACCGGCAGATGAACACC
AACTGGCCGGCCTCAGTGCAGGTCAGCGTCAATGCCACGCCCCTCACCATCGAGCGCGGC
GACAACAAGACGTCCCACAAGCCCCTGCACCTCAAGCATGTGTGCCAGCCTGGCCGCAAC
ACCATCCAGATCACTGTCACAGCCTGCTGCTGCTCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
165-340, gnl|bosTau2|chr28 (27859516-27859691) |
|
165-340, gnl|canFam2|chr4 (32231867-32232061) |
|
165-340, gnl|danRer3|chr13 (31713426-31713613) |
|
165-340, gnl|echTel1|scaffold_282979 (44221-44415) |
|
165-340, gnl|fr1|chrUn (53317254-53317450) |
|
165-340, gnl|galGal2|chr6 (11540418-11540224) |
|
165-340, gnl|hg17|chr10 (80728155-80728349) |
|
165-340, gnl|Hg17|chr10 (80728168-80728343) |
|
165-340, gnl|mm7|chr14 (23322393-23322586) |
|
165-340, gnl|Mm7|chr14 (23322404-23322579) |
|
165-340, gnl|monDom2|scaffold_14 (8862700-8862894) |
|
165-340, gnl|oryCun1|scaffold_197654 (15963-16157) |
|
165-340, gnl|panTro1|chr8 (82119909-82120103) |
|
165-340, gnl|rheMac2|chr9 (57774605-57774411) |
|
165-340, gnl|rn3|chr16 (1229067-1229257) |
|
165-340, gnl|tetNig1|chr2_random (878945-878761) |
|
165-340, gnl|xenTro1|scaffold_841 (65605-65799) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
165-340, gnl|bosTau2|chr28 (27859516-27859691) |
|
165-340, gnl|canFam2|chr4 (32231867-32232061) |
|
165-340, gnl|danRer3|chr13 (31713426-31713613) |
|
165-340, gnl|echTel1|scaffold_282979 (44221-44415) |
|
165-340, gnl|fr1|chrUn (53317254-53317450) |
|
165-340, gnl|galGal2|chr6 (11540418-11540224) |
|
165-340, gnl|hg17|chr10 (80728155-80728349) |
|
165-340, gnl|Hg17|chr10 (80728168-80728343) |
|
165-340, gnl|mm7|chr14 (23322393-23322586) |
|
165-340, gnl|Mm7|chr14 (23322404-23322579) |
|
165-340, gnl|monDom2|scaffold_14 (8862700-8862894) |
|
165-340, gnl|oryCun1|scaffold_197654 (15963-16157) |
|
165-340, gnl|panTro1|chr8 (82119909-82120103) |
|
165-340, gnl|rheMac2|chr9 (57774605-57774411) |
|
165-340, gnl|rn3|chr16 (1229067-1229257) |
|
165-340, gnl|tetNig1|chr2_random (878945-878761) |
|
165-340, gnl|xenTro1|scaffold_841 (65605-65799) |
