Ss1.1-Mixn-0030h13.5
|
GGCTCTGCCAACCTGTCCCCGGCAAAGCGGCAGCAGTACAACTCTCTGCTAAGCAACATG
ACCAGGATTTATTCCACAGCCAAGGTCTGCTTCCCCAACAAGACTGCCACCTGCTGGTCC
CTGGACCCAGAGCTCACTAATATCCTGGCCACCTCTCGAAGCTACACCCTGCTGCTATAT
GCCTGGGAGGGCTGGCACAACGCTGCGGGCATCCCACTGAAACCCCTGTACCAGGACTTC
ACTGCCCTCAGCAATGAGGCCTACAAGCAGGATGGCTTCTCAGACACCGGGGCCTACTGG
CGCTCCTTGTATGACTCACCCACCTTCACGGAGGATCTGGAGCGCCTCTACCATCAGTTA
GAGCCCCTCTACCTGAACCTCCATGCCTACGTCCGCCGCGCGCTGCACCGCCAATATGGG
GACAGATTCATCAACCTCAGGGGACCCATTCCTGCTCACCTGCTGGGGAACATGTGGGCC
CAGAGCTGGAACAACATCTATGACATGGTGGTGCCTTTCCCCGGCAAGCCCAGCCTTGAT
GTTACCAGTGCTATGGTGCAGAAGGGCTGGAATGTGACACACATGTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCTCTGCCAACCTGTCCCCGGCAAAGCGGCAGCAGTACAACTCTCTGCTAAGCAACATG
ACCAGGATTTATTCCACAGCCAAGGTCTGCTTCCCCAACAAGACTGCCACCTGCTGGTCC
CTGGACCCAGAGCTCACTAATATCCTGGCCACCTCTCGAAGCTACACCCTGCTGCTATAT
GCCTGGGAGGGCTGGCACAACGCTGCGGGCATCCCACTGAAACCCCTGTACCAGGACTTC
ACTGCCCTCAGCAATGAGGCCTACAAGCAGGATGGCTTCTCAGACACCGGGGCCTACTGG
CGCTCCTTGTATGACTCACCCACCTTCACGGAGGATCTGGAGCGCCTCTACCATCAGTTA
GAGCCCCTCTACCTGAACCTCCATGCCTACGTCCGCCGCGCGCTGCACCGCCAATATGGG
GACAGATTCATCAACCTCAGGGGACCCATTCCTGCTCACCTGCTGGGGAACATGTGGGCC
CAGAGCTGGAACAACATCTATGACATGGTGGTGCCTTTCCCCGGCAAGCCCAGCCTTGAT
GTTACCAGTGCTATGGTGCAGAAGGGCTGGAATGTGACACACATGTTC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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274-470, gnl|bosTau2|chr19 (40225726-40225922) |
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274-470, gnl|canFam2|chr9 (14626286-14626486) |
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274-470, gnl|danRer3|chr3 (17188502-17188701) |
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274-470, gnl|dasNov1|scaffold_89855 (9706-9506) |
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274-470, gnl|echTel1|scaffold_320855 (38185-38385) |
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274-470, gnl|fr1|chrUn (192403683-192403484) |
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274-470, gnl|galGal2|chr27 (1114594-1114794) |
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274-470, gnl|hg17|chr17 (58911428-58911628) |
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274-470, gnl|Hg17|chr17 (58911429-58911625) |
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274-470, gnl|loxAfr1|scaffold_29461 (10609-10409) |
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274-470, gnl|mm7|chr11 (106080331-106080531) |
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274-470, gnl|Mm7|chr11 (106080332-106080528) |
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274-470, gnl|monDom2|scaffold_18 (36098259-36098060) |
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274-470, gnl|oryCun1|scaffold_205422 (67093-67293) |
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274-470, gnl|panTro1|chr19 (46226973-46226773) |
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274-470, gnl|rheMac2|chr16 (59000697-59000897) |
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274-470, gnl|rn3|chr10 (95378904-95379104) |
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274-470, gnl|tetNig1|chr2 (4289133-4288936) |
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274-470, gnl|xenTro1|scaffold_127 (245747-245548) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
274-470, gnl|bosTau2|chr19 (40225726-40225922) |
|
274-470, gnl|canFam2|chr9 (14626286-14626486) |
|
274-470, gnl|danRer3|chr3 (17188502-17188701) |
|
274-470, gnl|dasNov1|scaffold_89855 (9706-9506) |
|
274-470, gnl|echTel1|scaffold_320855 (38185-38385) |
|
274-470, gnl|fr1|chrUn (192403683-192403484) |
|
274-470, gnl|galGal2|chr27 (1114594-1114794) |
|
274-470, gnl|hg17|chr17 (58911428-58911628) |
|
274-470, gnl|Hg17|chr17 (58911429-58911625) |
|
274-470, gnl|loxAfr1|scaffold_29461 (10609-10409) |
|
274-470, gnl|mm7|chr11 (106080331-106080531) |
|
274-470, gnl|Mm7|chr11 (106080332-106080528) |
|
274-470, gnl|monDom2|scaffold_18 (36098259-36098060) |
|
274-470, gnl|oryCun1|scaffold_205422 (67093-67293) |
|
274-470, gnl|panTro1|chr19 (46226973-46226773) |
|
274-470, gnl|rheMac2|chr16 (59000697-59000897) |
|
274-470, gnl|rn3|chr10 (95378904-95379104) |
|
274-470, gnl|tetNig1|chr2 (4289133-4288936) |
|
274-470, gnl|xenTro1|scaffold_127 (245747-245548) |
