Ss1.1-Mixn-0031b03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCGGCAGCACCCTTAGGAGCTGACAGCCCCGCCGGCCGGCTTCCTCGCTGACCGCCGAC TGTCAATGGAGCTGGAAAACATCGTGGCCAACACGGTCTTGCTGAAAGCCAGGGAAGGGG GCGGAGGAAAGCGCAAAGGGAAAAGCAAGAAGTGGAAGGAGATCCTGAAGTTCCCTCACA TCAGCCAGTGCGAAGACCTCCGGAGGACCCTAGACAGAGATTACTGCAGTTTGTGTGACA AACAGCCAATTGGGAGGCTGCTTTTCCGGCAGTTCTGCGAAACCAGACCTGGGCTGGAGT CTTACATTCAGTTCCTGGACTCAGTGGCAGAATATGAAGTTACTCCAGATGAAAAACTGG GAGAAAAGGGGAAAGAGATTATGACCAAGTACCTCACCCCAAAGTCTCCAGGTTTCATCG CCCAAGTCGGCCAGGACCTGGTCTCCCAGGCTGAGGAGAAGCTCCTCCAGAAACCCTGCA AAGAACTCTTTTCCACCTGCGTACAGTCCGTCCACGAATACCTGCGGGGAGGACCCTTCC ACGAGTACCTGGACAGCATGTATTTTGATCGCTTTCTCCAGTGGAAGTGGTTGGAAAGGC AACCGGTAACCAAAACCACTTTCAGACAGTACCGAGTACTAGGGAAAGGGGGCTTTGGGG AGGTCTGTGCCTGCCAGGTTCGGGCCACGGGTAAAATGTACGCCTGTAAGCGCCTGGAGA AGAAGAGGATCAAAAAGAGGAAAGGGGAGTCCATGGCTCTGAATGAGAAGCAAATCCTGG AGAAGGTCAACAGTCAGTTTGTGGTCAACCTGGCCTACGCCTACGAGACCAAGGACGCGC TGTGCTTGGTCCTGACCATCATGAATGGGGGGGACCTGAAGTTCCACATCTACAACATGG GGAACCCTGGCTTCGAGGAGGAGCGCGCCCTCTTCTACGCGGCGGAGATCCTGTGCGGCT TGGAAGACCTGCACCGCGAGAACACCGTCTACCGAGACTTGAAACCCGAAAACATCCTGT TAGATGATTACGGCCACATTAGGATCTCGGACCTGGGCCTGGCTGTGAAGATCCCCGAGG GCGACCTGATCCGAGGCCGGGTGGGCACCGTCGGCTACATGGCCCCGGAGGTCCTGAACA ACCAGAGGTATGGCCTGAGCCCTGACTACTGGGGCCTGGGCTGCCTCATCTACGAGATGA TCGAGGGCCAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCGGCAGCACCCTTAGGAGCTGACAGCCCCGCCGGCCGGCTTCCTCGCTGACCGCCGAC TGTCAATGGAGCTGGAAAACATCGTGGCCAACACGGTCTTGCTGAAAGCCAGGGAAGGGG GCGGAGGAAAGCGCAAAGGGAAAAGCAAGAAGTGGAAGGAGATCCTGAAGTTCCCTCACA TCAGCCAGTGCGAAGACCTCCGGAGGACCCTAGACAGAGATTACTGCAGTTTGTGTGACA AACAGCCAATTGGGAGGCTGCTTTTCCGGCAGTTCTGCGAAACCAGACCTGGGCTGGAGT CTTACATTCAGTTCCTGGACTCAGTGGCAGAATATGAAGTTACTCCAGATGAAAAACTGG GAGAAAAGGGGAAAGAGATTATGACCAAGTACCTCACCCCAAAGTCTCCAGGTTTCATCG CCCAAGTCGGCCAGGACCTGGTCTCCCAGGCTGAGGAGAAGCTCCTCCAGAAACCCTGCA AAGAACTCTTTTCCACCTGCGTACAGTCCGTCCACGAATACCTGCGGGGAGGACCCTTCC ACGAGTACCTGGACAGCATGTATTTTGATCGCTTTCTCCAGTGGAAGTGGTTGGAAAGGC AACCGGTAACCAAAACCACTTTCAGACAGTACCGAGTACTAGGGAAAGGGGGCTTTGGGG AGGTCTGTGCCTGCCAGGTTCGGGCCACGGGTAAAATGTACGCCTGTAAGCGCCTGGAGA AGAAGAGGATCAAAAAGAGGAAAGGGGAGTCCATGGCTCTGAATGAGAAGCAAATCCTGG AGAAGGTCAACAGTCAGTTTGTGGTCAACCTGGCCTACGCCTACGAGACCAAGGACGCGC TGTGCTTGGTCCTGACCATCATGAATGGGGGGGACCTGAAGTTCCACATCTACAACATGG GGAACCCTGGCTTCGAGGAGGAGCGCGCCCTCTTCTACGCGGCGGAGATCCTGTGCGGCT TGGAAGACCTGCACCGCGAGAACACCGTCTACCGAGACTTGAAACCCGAAAACATCCTGT TAGATGATTACGGCCACATTAGGATCTCGGACCTGGGCCTGGCTGTGAAGATCCCCGAGG GCGACCTGATCCGAGGCCGGGTGGGCACCGTCGGCTACATGGCCCCGGAGGTCCTGAACA ACCAGAGGTATGGCCTGAGCCCTGACTACTGGGGCCTGGGCTGCCTCATCTACGAGATGA TCGAGGGCCAGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 496-614, - strand, RNAz p=0.701827 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 496-614, - strand, RNAz p=0.701827 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-118, gnl|bosTau2|chr26 (26011470-26011353) | |
| 1-118, gnl|Hg17|chr10 (120957359-120957472) | |
| 1-118, gnl|Mm7|chr19 (60813227-60813340) | |
| 496-746, gnl|bosTau2|chr12 (47728094-47727845) | |
| 496-746, gnl|Hg17|chr13 (113370146-113370395) | |
| 496-746, gnl|Mm7|chr8 (13379781-13380030) | |
| 881-1027, gnl|bosTau2|chr12 (47742434-47742282) | |
| 881-1027, gnl|canFam2|chr22 (63878084-63878260) | |
| 881-1027, gnl|danRer3|chrUn (104855086-104854924) | |
| 881-1027, gnl|dasNov1|scaffold_43111 (5491-5664) | |
| 881-1027, gnl|echTel1|scaffold_249942 (883-715) | |
| 881-1027, gnl|fr1|chrUn (162996253-162996072) | |
| 881-1027, gnl|hg17|chr13 (113373810-113373994) | |
| 881-1027, gnl|Hg17|chr13 (113373815-113373967) | |
| 881-1027, gnl|loxAfr1|scaffold_20819 (65377-65199) | |
| 881-1027, gnl|mm7|chr8 (13383493-13383661) | |
| 881-1027, gnl|Mm7|chr8 (13383498-13383650) | |
| 881-1027, gnl|monDom2|scaffold_11 (31469885-31469710) | |
| 881-1027, gnl|oryCun1|scaffold_181427 (37386-37234) | |
| 881-1027, gnl|rheMac2|chr17 (93762977-93763158) | |
| 881-1027, gnl|rn3|chr16 (80987337-80987158) | |
| 881-1027, gnl|tetNig1|chr5 (8273800-8273632) | |
| 881-1027, gnl|xenTro1|scaffold_1119 (133166-133336) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-118, gnl|bosTau2|chr26 (26011470-26011353) | |
| 1-118, gnl|Hg17|chr10 (120957359-120957472) | |
| 1-118, gnl|Mm7|chr19 (60813227-60813340) | |
| 496-746, gnl|bosTau2|chr12 (47728094-47727845) | |
| 496-746, gnl|Hg17|chr13 (113370146-113370395) | |
| 496-746, gnl|Mm7|chr8 (13379781-13380030) | |
| 881-1027, gnl|bosTau2|chr12 (47742434-47742282) | |
| 881-1027, gnl|canFam2|chr22 (63878084-63878260) | |
| 881-1027, gnl|danRer3|chrUn (104855086-104854924) | |
| 881-1027, gnl|dasNov1|scaffold_43111 (5491-5664) | |
| 881-1027, gnl|echTel1|scaffold_249942 (883-715) | |
| 881-1027, gnl|fr1|chrUn (162996253-162996072) | |
| 881-1027, gnl|hg17|chr13 (113373810-113373994) | |
| 881-1027, gnl|Hg17|chr13 (113373815-113373967) | |
| 881-1027, gnl|loxAfr1|scaffold_20819 (65377-65199) | |
| 881-1027, gnl|mm7|chr8 (13383493-13383661) | |
| 881-1027, gnl|Mm7|chr8 (13383498-13383650) | |
| 881-1027, gnl|monDom2|scaffold_11 (31469885-31469710) | |
| 881-1027, gnl|oryCun1|scaffold_181427 (37386-37234) | |
| 881-1027, gnl|rheMac2|chr17 (93762977-93763158) | |
| 881-1027, gnl|rn3|chr16 (80987337-80987158) | |
| 881-1027, gnl|tetNig1|chr5 (8273800-8273632) | |
| 881-1027, gnl|xenTro1|scaffold_1119 (133166-133336) |