Non-Coding RNA Search

Ss1.1-Mixn-0033h13.5

Sequence:


               
               GTCATCAGCATGGCATCCTATTTAGGTAGTAATACAGTATAAAATCTAGAAATCCCACTT
TGGAGGGATCAAGGATATTCCTCATAATTAGAAATTGTCAATTTAGCCTTAAGCATTTTG
TTTTAAAAAATGTATTATGATAATGTGGAAAAAAACATGTCATTATTTCTAATTTTTCCC
TTGGTTAACAAATTAGGATACACAAAGCCTCAAATTACCTGTAAGGCTTATAAACATTTA
TATCTTTTATCCTTTAGTTAAGTTGTTTCATAAACCCAACATTGCCTCTAAAATGGTTTT
ACACACAAAGAGGATTTTACCGTAAAATGCTTGTGATGTGAATTTATTCTCTTCTGATTT
GGGGTGAGGAGGGGAAGGATAGAGGTAAGCAGGCTGGGCTTAAATTAATTTGTTTGGGGT
TGGTTTCAAAGTAGCATTCTGCATAGTTCTACAAAATGTATCATAGATAAGGGGATATAC
ATAGTGAAAGAATTTAAGGTTCAACATTAAATAACCCAGTGAATTATAGTATATTCATAC
AATAGAAGATAATGTAGCTATTAAAAATCATGTTAGAGCAATGAAGAGCATTTAAGGACA
GAAAAATATCATATGTAAGGATAGTTACAGGTAAAAATGCAAGTGAAAAATTGCAGAACA
CAAAATCAGCAGTTTTCTTCTTTCTTTTTTGTTTTGAGAGCATAAGCATAGATGAATGAC
TAGAAGGAATACACCAATATGTTTTAATNGCTATCCTGAGTGATTTTTTAAAATTTTTTT
CTGCATTTCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCATCAGCATGGCATCCTATTTAGGTAGTAATACAGTATAAAATCTAGAAATCCCACTT
TGGAGGGATCAAGGATATTCCTCATAATTAGAAATTGTCAATTTAGCCTTAAGCATTTTG
TTTTAAAAAATGTATTATGATAATGTGGAAAAAAACATGTCATTATTTCTAATTTTTCCC
TTGGTTAACAAATTAGGATACACAAAGCCTCAAATTACCTGTAAGGCTTATAAACATTTA
TATCTTTTATCCTTTAGTTAAGTTGTTTCATAAACCCAACATTGCCTCTAAAATGGTTTT
ACACACAAAGAGGATTTTACCGTAAAATGCTTGTGATGTGAATTTATTCTCTTCTGATTT
GGGGTGAGGAGGGGAAGGATAGAGGTAAGCAGGCTGGGCTTAAATTAATTTGTTTGGGGT
TGGTTTCAAAGTAGCATTCTGCATAGTTCTACAAAATGTATCATAGATAAGGGGATATAC
ATAGTGAAAGAATTTAAGGTTCAACATTAAATAACCCAGTGAATTATAGTATATTCATAC
AATAGAAGATAATGTAGCTATTAAAAATCATGTTAGAGCAATGAAGAGCATTTAAGGACA
GAAAAATATCATATGTAAGGATAGTTACAGGTAAAAATGCAAGTGAAAAATTGCAGAACA
CAAAATCAGCAGTTTTCTTCTTTCTTTTTTGTTTTGAGAGCATAAGCATAGATGAATGAC
TAGAAGGAATACACCAATATGTTTTAATNGCTATCCTGAGTGATTTTTTAAAATTTTTTT
CTGCATTTCAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               198-317, - strand, RNAz p=0.596184

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-317, - strand, RNAz p=0.596184

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-745, gnl|bosTau2|chr10 (60712182-60712932)
               

               
               1-745, gnl|Mm7|chr12 (82472494-82473216)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-745, gnl|bosTau2|chr10 (60712182-60712932)
               

               
               1-745, gnl|Mm7|chr12 (82472494-82473216)

	1-745, gnl\|bosTau2\|chr10 (60712182-60712932)
	1-745, gnl\|Mm7\|chr12 (82472494-82473216)