Ss1.1-Mixn-0033i13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCACAGACACTCACCAGGGACCGGGCCTTCGAGAGCACCCTGAAGTCCTGGGAGGACAA GCAGAAGTGTGAGCTGCCCCGGCCTCCGTCTTTCTCTCTGCACCCGGAGACCCTGTCGGA GGAGGAGGCCACCCAGATGGACCAGTTCGGGAGGGCGGCAGGCGCCCTCATCCACAGTAT CCGTGAGATAGCGCAGTCCCACCGGGACGTGGAGCAGGAGCTCGCCCACGCCGTCAACGC CAGCTCCAAGTCCATGGACCGAGTGTACGGCAAGCCCAGAGCCGCAGAGGGGCTGAGCTG CAGCTTCGTCCTGGACATGGTGAATAACGTCAGGGCTCTGCGCAGCGAGACGGAGCTGCT GCTGGCGGGCAAGCTGGCGCTGCAGTTGGATCCCCCTCAGAAGGAGCGACTCACGGCCGC CCTCGCCGAGATGGACCAGCAGCTCCGGAAGCTGGCAGATACCCCCTGGCTCTGCCAGCC CGTGGAGCCTGGGGATGAAGAGAACGTGATGCTGGATCTGTCCAAGCGCAGCCGCAGCGG TAAATTCCGCCTGGTGACCAAGTTTAAGAAGGAGAAGAACATCAAGAACAGAGAGGCTCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCACAGACACTCACCAGGGACCGGGCCTTCGAGAGCACCCTGAAGTCCTGGGAGGACAA GCAGAAGTGTGAGCTGCCCCGGCCTCCGTCTTTCTCTCTGCACCCGGAGACCCTGTCGGA GGAGGAGGCCACCCAGATGGACCAGTTCGGGAGGGCGGCAGGCGCCCTCATCCACAGTAT CCGTGAGATAGCGCAGTCCCACCGGGACGTGGAGCAGGAGCTCGCCCACGCCGTCAACGC CAGCTCCAAGTCCATGGACCGAGTGTACGGCAAGCCCAGAGCCGCAGAGGGGCTGAGCTG CAGCTTCGTCCTGGACATGGTGAATAACGTCAGGGCTCTGCGCAGCGAGACGGAGCTGCT GCTGGCGGGCAAGCTGGCGCTGCAGTTGGATCCCCCTCAGAAGGAGCGACTCACGGCCGC CCTCGCCGAGATGGACCAGCAGCTCCGGAAGCTGGCAGATACCCCCTGGCTCTGCCAGCC CGTGGAGCCTGGGGATGAAGAGAACGTGATGCTGGATCTGTCCAAGCGCAGCCGCAGCGG TAAATTCCGCCTGGTGACCAAGTTTAAGAAGGAGAAGAACATCAAGAACAGAGAGGCTCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 374-502, - strand, RNAz p=0.942262 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 374-502, - strand, RNAz p=0.942262 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 25-177, gnl|bosTau2|chr3 (80504151-80503999) | |
| 25-177, gnl|canFam2|chr25 (47949221-47949381) | |
| 25-177, gnl|danRer3|chrNA (175946916-175946753) | |
| 25-177, gnl|dasNov1|scaffold_12716 (17504-17344) | |
| 25-177, gnl|echTel1|scaffold_280114 (38293-38453) | |
| 25-177, gnl|fr1|chrUn (301990696-301990865) | |
| 25-177, gnl|galGal2|chr9 (697869-698028) | |
| 25-177, gnl|hg17|chr2 (234150838-234150998) | |
| 25-177, gnl|Hg17|chr2 (234150839-234150991) | |
| 25-177, gnl|loxAfr1|scaffold_5848 (60791-60951) | |
| 25-177, gnl|mm7|chr1 (87840314-87840471) | |
| 25-177, gnl|Mm7|chr1 (87840315-87840467) | |
| 25-177, gnl|monDom2|scaffold_171 (19001-19160) | |
| 25-177, gnl|oryCun1|scaffold_177606 (11565-11405) | |
| 25-177, gnl|panTro1|chr13 (124884482-124884642) | |
| 25-177, gnl|rheMac2|chr12 (97349466-97349626) | |
| 25-177, gnl|rn3|chr9 (87072630-87072787) | |
| 25-177, gnl|tetNig1|chrUn_random (135620723-135620891) | |
| 25-177, gnl|xenTro1|scaffold_209 (1519884-1519718) | |
| 374-502, gnl|bosTau2|chr3 (80502070-80501942) | |
| 374-502, gnl|Hg17|chr2 (234154795-234154929) | |
| 374-502, gnl|Mm7|chr1 (87842748-87842882) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 25-177, gnl|bosTau2|chr3 (80504151-80503999) | |
| 25-177, gnl|canFam2|chr25 (47949221-47949381) | |
| 25-177, gnl|danRer3|chrNA (175946916-175946753) | |
| 25-177, gnl|dasNov1|scaffold_12716 (17504-17344) | |
| 25-177, gnl|echTel1|scaffold_280114 (38293-38453) | |
| 25-177, gnl|fr1|chrUn (301990696-301990865) | |
| 25-177, gnl|galGal2|chr9 (697869-698028) | |
| 25-177, gnl|hg17|chr2 (234150838-234150998) | |
| 25-177, gnl|Hg17|chr2 (234150839-234150991) | |
| 25-177, gnl|loxAfr1|scaffold_5848 (60791-60951) | |
| 25-177, gnl|mm7|chr1 (87840314-87840471) | |
| 25-177, gnl|Mm7|chr1 (87840315-87840467) | |
| 25-177, gnl|monDom2|scaffold_171 (19001-19160) | |
| 25-177, gnl|oryCun1|scaffold_177606 (11565-11405) | |
| 25-177, gnl|panTro1|chr13 (124884482-124884642) | |
| 25-177, gnl|rheMac2|chr12 (97349466-97349626) | |
| 25-177, gnl|rn3|chr9 (87072630-87072787) | |
| 25-177, gnl|tetNig1|chrUn_random (135620723-135620891) | |
| 25-177, gnl|xenTro1|scaffold_209 (1519884-1519718) | |
| 374-502, gnl|bosTau2|chr3 (80502070-80501942) | |
| 374-502, gnl|Hg17|chr2 (234154795-234154929) | |
| 374-502, gnl|Mm7|chr1 (87842748-87842882) |