Non-Coding RNA Search

Ss1.1-Mixn-0035c02.5

Sequence:


               
               GGGAGCGGCGCAGCAGTTGCAGCACAGGCCCGTGGTGCTGTTCAGAGAGCTGGGTGGGAC
TGTCCAGAATGGCCCAGGCCCCCGGAAGCAAGAGCCTGTGACACTGCCCCCAAGCCTTCA
CCTGCAGATCCTCAGCATCCCTGGCTGGAAGTACAGTTCGAACCACACAGTGCACCTGAA
GAATCTCCAGAAAGGTCATTATAGAAGAGCCAAGGCAGACTTCCGCCGTGTCCTGCTGCG
ACTCCACCACCTGTATGAGGCGGGGGAGCATCAGGCGCTGTCTCGGCCGGTGACCCTGAA
TCTGCAGTCGGTGCTGCGGGGGCTGGGCTCCGTGGTGGCGGTGGAGGAGCGCTCGCTCAC
GGGGACCTGGGACGTGAACAGCCTGCACCGCTGGAGCTGGAAGACGGAGGACGGCCACCA
CCACAGAGGTAGCTCCAGACGTCCCTTGCCACCCCTGAGAGGCCCCAATGTCACCATCCA
CCCGAAGGAAATCCGGACATTCTTCATTCACTTTCAAGAGCAGTGAGCCCTTGGCAGGTT
CCGTGGCCCCAGGACCCAGAGGGCCGCCTGGGGGATGAGGGGAACAGCTGCCACTCTGGT
GGCAGCCCCAGGAAATGGATGGCTTGGGGGTGTTCGGGCTGCTTAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGCGGCGCAGCAGTTGCAGCACAGGCCCGTGGTGCTGTTCAGAGAGCTGGGTGGGAC
TGTCCAGAATGGCCCAGGCCCCCGGAAGCAAGAGCCTGTGACACTGCCCCCAAGCCTTCA
CCTGCAGATCCTCAGCATCCCTGGCTGGAAGTACAGTTCGAACCACACAGTGCACCTGAA
GAATCTCCAGAAAGGTCATTATAGAAGAGCCAAGGCAGACTTCCGCCGTGTCCTGCTGCG
ACTCCACCACCTGTATGAGGCGGGGGAGCATCAGGCGCTGTCTCGGCCGGTGACCCTGAA
TCTGCAGTCGGTGCTGCGGGGGCTGGGCTCCGTGGTGGCGGTGGAGGAGCGCTCGCTCAC
GGGGACCTGGGACGTGAACAGCCTGCACCGCTGGAGCTGGAAGACGGAGGACGGCCACCA
CCACAGAGGTAGCTCCAGACGTCCCTTGCCACCCCTGAGAGGCCCCAATGTCACCATCCA
CCCGAAGGAAATCCGGACATTCTTCATTCACTTTCAAGAGCAGTGAGCCCTTGGCAGGTT
CCGTGGCCCCAGGACCCAGAGGGCCGCCTGGGGGATGAGGGGAACAGCTGCCACTCTGGT
GGCAGCCCCAGGAAATGGATGGCTTGGGGGTGTTCGGGCTGCTTAAAT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61877275|ref|XP_596031.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61877275|ref|XP_596031.1|

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               58-196, gnl|bosTau2|chr6 (68077990-68077852)
               

               
               58-196, gnl|Hg17|chr4 (6734018-6734156)
               

               
               58-196, gnl|Mm7|chr5 (35891801-35891684)
               


               
               197-307, gnl|bosTau2|chr6 (58973675-58973786)
               

               
               197-307, gnl|Hg17|chr4 (6737180-6737291)
               

               
               197-307, gnl|Mm7|chr5 (35890508-35890398)
               


               
               427-648, gnl|bosTau2|chr6 (59481268-59481043)
               

               
               427-648, gnl|Hg17|chr4 (6740985-6741257)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-196, gnl|bosTau2|chr6 (68077990-68077852)
               

               
               58-196, gnl|Hg17|chr4 (6734018-6734156)
               

               
               58-196, gnl|Mm7|chr5 (35891801-35891684)
               


               
               197-307, gnl|bosTau2|chr6 (58973675-58973786)
               

               
               197-307, gnl|Hg17|chr4 (6737180-6737291)
               

               
               197-307, gnl|Mm7|chr5 (35890508-35890398)
               


               
               427-648, gnl|bosTau2|chr6 (59481268-59481043)
               

               
               427-648, gnl|Hg17|chr4 (6740985-6741257)

	58-196, gnl\|bosTau2\|chr6 (68077990-68077852)
	58-196, gnl\|Hg17\|chr4 (6734018-6734156)
	58-196, gnl\|Mm7\|chr5 (35891801-35891684)

	197-307, gnl\|bosTau2\|chr6 (58973675-58973786)
	197-307, gnl\|Hg17\|chr4 (6737180-6737291)
	197-307, gnl\|Mm7\|chr5 (35890508-35890398)

	427-648, gnl\|bosTau2\|chr6 (59481268-59481043)
	427-648, gnl\|Hg17\|chr4 (6740985-6741257)