Ss1.1-Mixn-0035f11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCACCATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGC GGCGGGGCCAGGGGCAGGACAGGAAGTACAGACAGAAAATGTGACAGTAGCCGAGGGCGG GGTGGCCGAGATAACCTGCCGCCTGCACCAGTATGATGGATCCATAGTTGTCATTCAGAA CCCAGCCCGGCAGACCCTCTTTTTCAATGGTACCCGCGCCCTGAAGGATGAGCGATTCCA GCTTGAGGAGTTCTCCCCGCGCCGGGTACGGATCCGGCTCTCAGATGCGCGCCTGGAGGA CGAAGGGGGCTACTTCTGCCAGCTCTATACGGAGGATACGCACCACCAGATCGCCACGCT CACTGTCCTGGTGGCCCCGGAGAATCCTATAGTGGAGGTCCGGGAACAGGCAGTGGAGGG TGGCGAAGTGGAGCTCAGCTGCCTAGTTCCGCGTTCCCGCCCGGCCGCCATCCTGCGCTG GTACCGAGATCGAAAGGAGCTGAAAGGGGTGAGCAGCGGCCAGGAGAACGGCAAGGTCTG GAGCGTTGCGAGCACAGTGCGGTTTCGTGTGGACCGCAAGGACGACGGCGGTATCGTCAT CTGCGAGGCACAGAACCAAGCGCTGCCCTCTGGACACAGCAAGCAGACGCAGTACGTGCT GGACGTGCAGTACTCCCCCACAGCCCGGATCCATGCCTCCCAAGCTGTGGTGCGAGAGGG AGACACCCTGGTGCTGACGTGTGCTGTGACGGGGAACCCCAGGCCAAACCAGATCCGCTG GAACCGCGGAAATGAGTCTTTGCCGGAGCGGGCCGAGGCAGTCGGGGAGACACTTACGCT GCCCGGCCTAGTATCAGCGGATAATGGCACCTATACCTGCGAGGCGTCAAACAAGCACGG CCACGCGAGGGCGCTCTATGTGCTCGTGGTCTACGGTGAGCACCTGCTTCAGCAGGCCCT CGGAAAAGGCTCAGGGCCGAGTCGGTGCGGGTCTCCGCTTTGTCCTGGGTGGGGCGGGGC CTTGGTAGTGGGTGGGCTGGACTGGATAGTGTTTGAGGCCCCAGGCCTGTGCAAAGAACC ATCTGAGTTCAGATTCGGTTCTGCACTGTGCTATTATGAGTAACTGTTCCTTAAGTTACT CATCGGTAAAGTAGAAATGAACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCACCATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGC GGCGGGGCCAGGGGCAGGACAGGAAGTACAGACAGAAAATGTGACAGTAGCCGAGGGCGG GGTGGCCGAGATAACCTGCCGCCTGCACCAGTATGATGGATCCATAGTTGTCATTCAGAA CCCAGCCCGGCAGACCCTCTTTTTCAATGGTACCCGCGCCCTGAAGGATGAGCGATTCCA GCTTGAGGAGTTCTCCCCGCGCCGGGTACGGATCCGGCTCTCAGATGCGCGCCTGGAGGA CGAAGGGGGCTACTTCTGCCAGCTCTATACGGAGGATACGCACCACCAGATCGCCACGCT CACTGTCCTGGTGGCCCCGGAGAATCCTATAGTGGAGGTCCGGGAACAGGCAGTGGAGGG TGGCGAAGTGGAGCTCAGCTGCCTAGTTCCGCGTTCCCGCCCGGCCGCCATCCTGCGCTG GTACCGAGATCGAAAGGAGCTGAAAGGGGTGAGCAGCGGCCAGGAGAACGGCAAGGTCTG GAGCGTTGCGAGCACAGTGCGGTTTCGTGTGGACCGCAAGGACGACGGCGGTATCGTCAT CTGCGAGGCACAGAACCAAGCGCTGCCCTCTGGACACAGCAAGCAGACGCAGTACGTGCT GGACGTGCAGTACTCCCCCACAGCCCGGATCCATGCCTCCCAAGCTGTGGTGCGAGAGGG AGACACCCTGGTGCTGACGTGTGCTGTGACGGGGAACCCCAGGCCAAACCAGATCCGCTG GAACCGCGGAAATGAGTCTTTGCCGGAGCGGGCCGAGGCAGTCGGGGAGACACTTACGCT GCCCGGCCTAGTATCAGCGGATAATGGCACCTATACCTGCGAGGCGTCAAACAAGCACGG CCACGCGAGGGCGCTCTATGTGCTCGTGGTCTACGGTGAGCACCTGCTTCAGCAGGCCCT CGGAAAAGGCTCAGGGCCGAGTCGGTGCGGGTCTCCGCTTTGTCCTGGGTGGGGCGGGGC CTTGGTAGTGGGTGGGCTGGACTGGATAGTGTTTGAGGCCCCAGGCCTGTGCAAAGAACC ATCTGAGTTCAGATTCGGTTCTGCACTGTGCTATTATGAGTAACTGTTCCTTAAGTTACT CATCGGTAAAGTAGAAATGAACAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 758-876, + strand, RNAz p=0.525542 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 758-876, + strand, RNAz p=0.525542 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 65-216, gnl|bosTau2|chr18 (46207938-46208089) | |
| 65-216, gnl|Hg17|chr19 (48823789-48823638) | |
| 65-216, gnl|Mm7|chr7 (21286703-21286854) | |
| 218-371, gnl|bosTau2|chr18 (46208391-46208544) | |
| 218-371, gnl|Hg17|chr19 (48823311-48823158) | |
| 218-371, gnl|Mm7|chr7 (21287066-21287219) | |
| 505-671, gnl|bosTau2|chr18 (46209576-46209742) | |
| 505-671, gnl|canFam2|chr1 (114401468-114401273) | |
| 505-671, gnl|echTel1|scaffold_300911 (4745-4564) | |
| 505-671, gnl|hg17|chr19 (48822092-48822287) | |
| 505-671, gnl|Hg17|chr19 (48822282-48822116) | |
| 505-671, gnl|loxAfr1|scaffold_231644 (553-734) | |
| 505-671, gnl|mm7|chr7 (21288205-21288025) | |
| 505-671, gnl|Mm7|chr7 (21288028-21288194) | |
| 505-671, gnl|monDom2|scaffold_212 (1031121-1030921) | |
| 505-671, gnl|oryCun1|scaffold_117256 (571-750) | |
| 505-671, gnl|panTro1|chr20 (45755298-45755493) | |
| 505-671, gnl|rheMac2|chr19 (50084107-50084302) | |
| 505-671, gnl|rn3|chr1 (79863602-79863422) | |
| 505-671, gnl|tetNig1|chrUn_random (53285941-53286094) | |
| 505-671, gnl|xenTro1|scaffold_496 (345197-345024) | |
| 758-946, gnl|bosTau2|chr18 (46210332-46210520) | |
| 758-946, gnl|Hg17|chr19 (48821247-48821060) | |
| 758-946, gnl|Mm7|chr7 (21289114-21289302) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 65-216, gnl|bosTau2|chr18 (46207938-46208089) | |
| 65-216, gnl|Hg17|chr19 (48823789-48823638) | |
| 65-216, gnl|Mm7|chr7 (21286703-21286854) | |
| 218-371, gnl|bosTau2|chr18 (46208391-46208544) | |
| 218-371, gnl|Hg17|chr19 (48823311-48823158) | |
| 218-371, gnl|Mm7|chr7 (21287066-21287219) | |
| 505-671, gnl|bosTau2|chr18 (46209576-46209742) | |
| 505-671, gnl|canFam2|chr1 (114401468-114401273) | |
| 505-671, gnl|echTel1|scaffold_300911 (4745-4564) | |
| 505-671, gnl|hg17|chr19 (48822092-48822287) | |
| 505-671, gnl|Hg17|chr19 (48822282-48822116) | |
| 505-671, gnl|loxAfr1|scaffold_231644 (553-734) | |
| 505-671, gnl|mm7|chr7 (21288205-21288025) | |
| 505-671, gnl|Mm7|chr7 (21288028-21288194) | |
| 505-671, gnl|monDom2|scaffold_212 (1031121-1030921) | |
| 505-671, gnl|oryCun1|scaffold_117256 (571-750) | |
| 505-671, gnl|panTro1|chr20 (45755298-45755493) | |
| 505-671, gnl|rheMac2|chr19 (50084107-50084302) | |
| 505-671, gnl|rn3|chr1 (79863602-79863422) | |
| 505-671, gnl|tetNig1|chrUn_random (53285941-53286094) | |
| 505-671, gnl|xenTro1|scaffold_496 (345197-345024) | |
| 758-946, gnl|bosTau2|chr18 (46210332-46210520) | |
| 758-946, gnl|Hg17|chr19 (48821247-48821060) | |
| 758-946, gnl|Mm7|chr7 (21289114-21289302) |