Non-Coding RNA Search

Ss1.1-Mixn-0036a07.5

Sequence:


               
               GAAAAATATATATTGTCCATACTGTAAATAAGTGTATGCTTATTTATTTGGGGGGAAAAG
TATACATAAAGGACCTTTGTCCTAAAGCTCTCTCCCAGGCCACCTTGTTACTCATTGGAC
CCGGAGAGGCAGTCATTGTGAGGTCTACTGGATGAGGCCCATAGTTGAGACTTGTAGACA
TTTATTTATACTGTGTCATGTTTTATAATTTATACATAAAATGTCTGGTTGACTGTACGT
ACACCTTGTTTTTGAAGAAATTTATTCGTGAAAGGAAGAGCAGTTGTTATTTATTGTGAG
GTCTCTTGCTTGTAAAGTAAAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAATATATATTGTCCATACTGTAAATAAGTGTATGCTTATTTATTTGGGGGGAAAAG
TATACATAAAGGACCTTTGTCCTAAAGCTCTCTCCCAGGCCACCTTGTTACTCATTGGAC
CCGGAGAGGCAGTCATTGTGAGGTCTACTGGATGAGGCCCATAGTTGAGACTTGTAGACA
TTTATTTATACTGTGTCATGTTTTATAATTTATACATAAAATGTCTGGTTGACTGTACGT
ACACCTTGTTTTTGAAGAAATTTATTCGTGAAAGGAAGAGCAGTTGTTATTTATTGTGAG
GTCTCTTGCTTGTAAAGTAAAAGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               2-119, + strand, RNAz p=0.658739

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-119, + strand, RNAz p=0.658739

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-324, gnl|bosTau2|chr20 (13863136-13863454)
               

               
               2-324, gnl|Hg17|chr5 (52817694-52818013)
               

               
               2-324, gnl|Mm7|chr13 (111625744-111625424)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-324, gnl|bosTau2|chr20 (13863136-13863454)
               

               
               2-324, gnl|Hg17|chr5 (52817694-52818013)
               

               
               2-324, gnl|Mm7|chr13 (111625744-111625424)

	2-324, gnl\|bosTau2\|chr20 (13863136-13863454)
	2-324, gnl\|Hg17\|chr5 (52817694-52818013)
	2-324, gnl\|Mm7\|chr13 (111625744-111625424)