Ss1.1-Mixn-0037k23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGAACCCTCCTTTCTGCTTGCCTCAAACCTGCCAAATATACCCACACTTTGTTTATATT ACTCCCTTGCTTGCATCTTGTTTCCCAAAATGGTCCAGCCTTCGGAACCATCGCTTCATC GGCTCATATTTCTTAGAGCTCCGGAATGAAACTATTTCTCTCTTCTTAAGTATAGAGATG ACTTCCTCTGGCCTCTTATTTAAGGGCAGAGGCAGCTGGGAGTTTCCCTGACCACTTGCC CTCAGCCCATGACTTAGGAGAGGCTGGCTCAGGAGGTACTGGCATCCCCTCGTGGTGGCC TGGACTCAGCTCTCCTGGACACCAGCGCAAATGGGAAGCTATAAATATTCTCACCAGAGT CACAGAGAAAGTGAAGATGGTGACTCAAGGACCAGGGGATTTCTTATGTTAACAAACCTT TTTTTTTTTTTTTTTCAGTCTCACTCTATATTAAAGACTGACTATATTTATACAACAGAG ACTTTGTAATGGATTTTTCAACGTTGTGAAACTCAATTTTGGTCTCCTCAAGACTGCCTG GATTTCCTTTTTGCTCTGTATTCCATAAATTTGTAGTTTGTTACAGGATGGGTATCTCCT GTCACATTTGTGTGTGTATGTGAAATAAAAACATAATTTCTAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGAACCCTCCTTTCTGCTTGCCTCAAACCTGCCAAATATACCCACACTTTGTTTATATT ACTCCCTTGCTTGCATCTTGTTTCCCAAAATGGTCCAGCCTTCGGAACCATCGCTTCATC GGCTCATATTTCTTAGAGCTCCGGAATGAAACTATTTCTCTCTTCTTAAGTATAGAGATG ACTTCCTCTGGCCTCTTATTTAAGGGCAGAGGCAGCTGGGAGTTTCCCTGACCACTTGCC CTCAGCCCATGACTTAGGAGAGGCTGGCTCAGGAGGTACTGGCATCCCCTCGTGGTGGCC TGGACTCAGCTCTCCTGGACACCAGCGCAAATGGGAAGCTATAAATATTCTCACCAGAGT CACAGAGAAAGTGAAGATGGTGACTCAAGGACCAGGGGATTTCTTATGTTAACAAACCTT TTTTTTTTTTTTTTTCAGTCTCACTCTATATTAAAGACTGACTATATTTATACAACAGAG ACTTTGTAATGGATTTTTCAACGTTGTGAAACTCAATTTTGGTCTCCTCAAGACTGCCTG GATTTCCTTTTTGCTCTGTATTCCATAAATTTGTAGTTTGTTACAGGATGGGTATCTCCT GTCACATTTGTGTGTGTATGTGAAATAAAAACATAATTTCTAAAAAAA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 126-295, - strand, RNAz p=0.965581 | |
| 154-295, + strand, RNAz p=0.965422 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 126-295, - strand, RNAz p=0.965581 | |
| 154-295, + strand, RNAz p=0.965422 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 4-295, gnl|bosTau2|chr3 (31171736-31172036) | |
| 4-295, gnl|canFam2|chr6 (45672872-45672511) | |
| 4-295, gnl|echTel1|scaffold_319338 (135329-134946) | |
| 4-295, gnl|hg17|chr1 (109457686-109458051) | |
| 4-295, gnl|Hg17|chr1 (109457837-109458134) | |
| 4-295, gnl|loxAfr1|scaffold_1838 (51248-51606) | |
| 4-295, gnl|mm7|chr3 (108276680-108276309) | |
| 4-295, gnl|Mm7|chr3 (108276521-108276237) | |
| 4-295, gnl|monDom2|scaffold_0 (7484403-7484036) | |
| 4-295, gnl|panTro1|chr1 (108380953-108381318) | |
| 4-295, gnl|rheMac2|chr1 (112251893-112252259) | |
| 4-295, gnl|rn3|chr2 (203984636-203984277) | |
| 369-635, gnl|bosTau2|chr3 (31174072-31174332) | |
| 369-635, gnl|canFam2|chr6 (45670514-45670124) | |
| 369-635, gnl|echTel1|scaffold_319338 (133081-132688) | |
| 369-635, gnl|hg17|chr1 (109461014-109461431) | |
| 369-635, gnl|Hg17|chr1 (109461162-109461437) | |
| 369-635, gnl|loxAfr1|scaffold_1838 (53794-54199) | |
| 369-635, gnl|mm7|chr3 (108274396-108273998) | |
| 369-635, gnl|Mm7|chr3 (108274243-108273990) | |
| 369-635, gnl|monDom2|scaffold_0 (7482831-7482433) | |
| 369-635, gnl|oryCun1|scaffold_176124 (9463-9003) | |
| 369-635, gnl|panTro1|chr1 (108384290-108384704) | |
| 369-635, gnl|rn3|chr2 (203982398-203981991) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-295, gnl|bosTau2|chr3 (31171736-31172036) | |
| 4-295, gnl|canFam2|chr6 (45672872-45672511) | |
| 4-295, gnl|echTel1|scaffold_319338 (135329-134946) | |
| 4-295, gnl|hg17|chr1 (109457686-109458051) | |
| 4-295, gnl|Hg17|chr1 (109457837-109458134) | |
| 4-295, gnl|loxAfr1|scaffold_1838 (51248-51606) | |
| 4-295, gnl|mm7|chr3 (108276680-108276309) | |
| 4-295, gnl|Mm7|chr3 (108276521-108276237) | |
| 4-295, gnl|monDom2|scaffold_0 (7484403-7484036) | |
| 4-295, gnl|panTro1|chr1 (108380953-108381318) | |
| 4-295, gnl|rheMac2|chr1 (112251893-112252259) | |
| 4-295, gnl|rn3|chr2 (203984636-203984277) | |
| 369-635, gnl|bosTau2|chr3 (31174072-31174332) | |
| 369-635, gnl|canFam2|chr6 (45670514-45670124) | |
| 369-635, gnl|echTel1|scaffold_319338 (133081-132688) | |
| 369-635, gnl|hg17|chr1 (109461014-109461431) | |
| 369-635, gnl|Hg17|chr1 (109461162-109461437) | |
| 369-635, gnl|loxAfr1|scaffold_1838 (53794-54199) | |
| 369-635, gnl|mm7|chr3 (108274396-108273998) | |
| 369-635, gnl|Mm7|chr3 (108274243-108273990) | |
| 369-635, gnl|monDom2|scaffold_0 (7482831-7482433) | |
| 369-635, gnl|oryCun1|scaffold_176124 (9463-9003) | |
| 369-635, gnl|panTro1|chr1 (108384290-108384704) | |
| 369-635, gnl|rn3|chr2 (203982398-203981991) |