Ss1.1-Mixn-0038h05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTTAAAGTAAAAAATGAAGAACGTGGCTTTTGCTATGAAGTGTATAAGGGAAGAAAACA CATAGTGGACACGAAGCAGCAGGAGCACGTCTACTCAGAGAAGAGGATCCTGGAGGAGCT GTGCTCGCCCTTCATCGTCAAGTTATACCGCACGTTCAAGGACAGCAAGTACGTCTACAT GCTGCTGGAGGCCTGCTTAGGCGGGGAGCTGTGGAGCATATTAAGGGACAGAGGCAGCTT TGATGAGCCCACCTCCAAGTTCTGCGTGGCCTGCGTGACAGAAGCGTTTGATTACCTGCA TCGGCTGGGGATTATCTACAGGGACCTGAAACCAGAAAACCTAATTCTCGATGCTGAGGG CTATCTTAAGTTGGTGGACTTTGGATTCGCTAAAAAGATCGGATCTGGACAGAAGACATG GACGTTCTGCGGAACTCCAGAATACGTAGCTCCTGAGGTCATTCTCAACAAAGGACATGA CTTCAGCGTGGATTTCTGGTCCCTGGGAATTCTGGTGTATGAACTGCTGACGGGCAACCC GCCCTTTTCTGGAATTGACCAAATGATGACCTACAACTTGATTCTCAAAGGAATTGAAAA AATGGATTTTCCCAGGAAGATAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTTAAAGTAAAAAATGAAGAACGTGGCTTTTGCTATGAAGTGTATAAGGGAAGAAAACA CATAGTGGACACGAAGCAGCAGGAGCACGTCTACTCAGAGAAGAGGATCCTGGAGGAGCT GTGCTCGCCCTTCATCGTCAAGTTATACCGCACGTTCAAGGACAGCAAGTACGTCTACAT GCTGCTGGAGGCCTGCTTAGGCGGGGAGCTGTGGAGCATATTAAGGGACAGAGGCAGCTT TGATGAGCCCACCTCCAAGTTCTGCGTGGCCTGCGTGACAGAAGCGTTTGATTACCTGCA TCGGCTGGGGATTATCTACAGGGACCTGAAACCAGAAAACCTAATTCTCGATGCTGAGGG CTATCTTAAGTTGGTGGACTTTGGATTCGCTAAAAAGATCGGATCTGGACAGAAGACATG GACGTTCTGCGGAACTCCAGAATACGTAGCTCCTGAGGTCATTCTCAACAAAGGACATGA CTTCAGCGTGGATTTCTGGTCCCTGGGAATTCTGGTGTATGAACTGCTGACGGGCAACCC GCCCTTTTCTGGAATTGACCAAATGATGACCTACAACTTGATTCTCAAAGGAATTGAAAA AATGGATTTTCCCAGGAAGATAAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 404-537, + strand, RNAz p=0.614169 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 404-537, + strand, RNAz p=0.614169 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 2-143, gnl|bosTau2|chr6 (53352698-53352560) | |
| 2-143, gnl|canFam2|chr32 (8265498-8265658) | |
| 2-143, gnl|danRer3|chr5 (35221100-35221260) | |
| 2-143, gnl|dasNov1|scaffold_128304 (974-814) | |
| 2-143, gnl|echTel1|scaffold_304017 (10276-10119) | |
| 2-143, gnl|fr1|chrUn (155064516-155064373) | |
| 2-143, gnl|galGal2|chr4 (46217850-46217690) | |
| 2-143, gnl|hg17|chr4 (82418860-82419020) | |
| 2-143, gnl|Hg17|chr4 (82419002-82418864) | |
| 2-143, gnl|loxAfr1|scaffold_50407 (4919-5079) | |
| 2-143, gnl|mm7|chr5 (98184712-98184872) | |
| 2-143, gnl|Mm7|chr5 (98184854-98184716) | |
| 2-143, gnl|monDom2|scaffold_37 (19326849-19326686) | |
| 2-143, gnl|oryCun1|scaffold_198238 (34578-34418) | |
| 2-143, gnl|panTro1|chr3 (51309274-51309114) | |
| 2-143, gnl|rheMac2|chr5 (48427463-48427303) | |
| 2-143, gnl|rn3|chr14 (11946837-11946677) | |
| 2-143, gnl|tetNig1|chr1_random (219555-219408) | |
| 2-143, gnl|xenTro1|scaffold_267 (652806-652966) | |
| 364-537, gnl|bosTau2|chr6 (53323261-53323088) | |
| 364-537, gnl|Hg17|chr4 (82388954-82388781) | |
| 364-537, gnl|Mm7|chr5 (98162325-98162152) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-143, gnl|bosTau2|chr6 (53352698-53352560) | |
| 2-143, gnl|canFam2|chr32 (8265498-8265658) | |
| 2-143, gnl|danRer3|chr5 (35221100-35221260) | |
| 2-143, gnl|dasNov1|scaffold_128304 (974-814) | |
| 2-143, gnl|echTel1|scaffold_304017 (10276-10119) | |
| 2-143, gnl|fr1|chrUn (155064516-155064373) | |
| 2-143, gnl|galGal2|chr4 (46217850-46217690) | |
| 2-143, gnl|hg17|chr4 (82418860-82419020) | |
| 2-143, gnl|Hg17|chr4 (82419002-82418864) | |
| 2-143, gnl|loxAfr1|scaffold_50407 (4919-5079) | |
| 2-143, gnl|mm7|chr5 (98184712-98184872) | |
| 2-143, gnl|Mm7|chr5 (98184854-98184716) | |
| 2-143, gnl|monDom2|scaffold_37 (19326849-19326686) | |
| 2-143, gnl|oryCun1|scaffold_198238 (34578-34418) | |
| 2-143, gnl|panTro1|chr3 (51309274-51309114) | |
| 2-143, gnl|rheMac2|chr5 (48427463-48427303) | |
| 2-143, gnl|rn3|chr14 (11946837-11946677) | |
| 2-143, gnl|tetNig1|chr1_random (219555-219408) | |
| 2-143, gnl|xenTro1|scaffold_267 (652806-652966) | |
| 364-537, gnl|bosTau2|chr6 (53323261-53323088) | |
| 364-537, gnl|Hg17|chr4 (82388954-82388781) | |
| 364-537, gnl|Mm7|chr5 (98162325-98162152) |