Non-Coding RNA Search

Ss1.1-OvF8-UMC-p8mm4-018-b03.3

Sequence:


               
               TGCGCAGCTCTGGACCCCTAACCAGCCCCCAGGTCATCAAACCAAACCGCATGCTGGCTC
CACCCCTGGGCGGCACAGCCCAGGCTGCCAAGAAAGATCGGCCGCGCTTCCACACGGCCC
TCGACCCCTTTCGGATGAACACGGAGTTCATGCTCTTGACTGTGAAGGAGGAGAAGGAGT
ACGAGCAGGCCAAGGTGAAGGAGAACCAGGCCGCGGAGCCCGCGGGCCGCGTGGATCCAG
AAAGAGCCAGCAGAGCCGCATGGATCCGGAAGATCAAAGGCCTGCCCATAGATGATTTCA
TGAAGCCAGGAAAAACAGCAGCCCCTGAACTGGGACAGAACATATTTATCTGAACCAGCC
TCGGGAAATTACAGTGTCTTACAGTAAACAGAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGCAGCTCTGGACCCCTAACCAGCCCCCAGGTCATCAAACCAAACCGCATGCTGGCTC
CACCCCTGGGCGGCACAGCCCAGGCTGCCAAGAAAGATCGGCCGCGCTTCCACACGGCCC
TCGACCCCTTTCGGATGAACACGGAGTTCATGCTCTTGACTGTGAAGGAGGAGAAGGAGT
ACGAGCAGGCCAAGGTGAAGGAGAACCAGGCCGCGGAGCCCGCGGGCCGCGTGGATCCAG
AAAGAGCCAGCAGAGCCGCATGGATCCGGAAGATCAAAGGCCTGCCCATAGATGATTTCA
TGAAGCCAGGAAAAACAGCAGCCCCTGAACTGGGACAGAACATATTTATCTGAACCAGCC
TCGGGAAATTACAGTGTCTTACAGTAAACAGAAAAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-119, - strand, RNAz p=0.935623

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, - strand, RNAz p=0.935623

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-396, gnl|bosTau2|chr19 (23508909-23508514)
               

               
               1-396, gnl|Hg17|chr17 (15409924-15409529)
               

               
               1-396, gnl|Mm7|chr11 (62958631-62959027)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-396, gnl|bosTau2|chr19 (23508909-23508514)
               

               
               1-396, gnl|Hg17|chr17 (15409924-15409529)
               

               
               1-396, gnl|Mm7|chr11 (62958631-62959027)

	1-396, gnl\|bosTau2\|chr19 (23508909-23508514)
	1-396, gnl\|Hg17\|chr17 (15409924-15409529)
	1-396, gnl\|Mm7\|chr11 (62958631-62959027)