Non-Coding RNA Search

Ss1.1-Ova1-OVR010012C12.5

Sequence:


               
               GAGTGCTCAGACCATGGCGATGGGGAAGCTGTTGCTGTGGGTCGGGCTGGTTCTTGTGCT
GAAACACCACAATGGTGCTGCCCACAAGCTGGTGTGTTATTTTGCCAACTGGGCATTCAG
TCGGCCAGGCCCTGCTTCGATCCTGCCCCGGGACCTGGACCCCTTTCTCTGCACCCATCT
GGTCTTCGCCTTCGCCTCAATGAACGACAGTCAGATTGTGGCCAAGGATGCCCGGGATGA
GAGCATCTTCTACCCAGAGTTCAACCAGCTCAAGGAGAGGAACGGGAAGCTGAAAACACT
GCTATCCATCGGAGGGTGGAACTTTGGCACATCCAGGTTCACCACGATGCTGTCCACCTT
CACCAACCGGGAAAAGTTCATCAGGTCTGCCATAGGCCTCCTGAGGACACATGGCTTCGA
CGGGCTGGACCTCTTCTTCTTGTACCCTGGACTCAGAGGCAGCCCCAGGCGTGACCGCTG
GAACTTTCTCTTCTTACTTGAAGAGCTCCTGCTTGCCTTCAGGAGGGAGGCACAGCTCAC
CATGCGTCCGAGGCTGCTGCTCTCTGCTGCTGTCTCTGCGGATCCGCATGTCATCCAAAA
AGCCTATGATGTGCGCCTTCTGGGAAGACTCCTGGATTTCATCAATGTCTTGTCTTATGA
CTTACATGGAAGCTGGGAGAAGGTCACGGGACACAACAGCCCCCTATTCTCTCTGTCTGA
TGACCCCAAATCTTCGGCGTACACCATGAATTACTGGCGAAAGCTTGGGGCGCCCCCGGA
GAAGCTCCTTATGGGTTTTCCCACATATGGACGGACTTTTCGCCTCCTCAAAGCCTCTAA
GAATGAGCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTGCTCAGACCATGGCGATGGGGAAGCTGTTGCTGTGGGTCGGGCTGGTTCTTGTGCT
GAAACACCACAATGGTGCTGCCCACAAGCTGGTGTGTTATTTTGCCAACTGGGCATTCAG
TCGGCCAGGCCCTGCTTCGATCCTGCCCCGGGACCTGGACCCCTTTCTCTGCACCCATCT
GGTCTTCGCCTTCGCCTCAATGAACGACAGTCAGATTGTGGCCAAGGATGCCCGGGATGA
GAGCATCTTCTACCCAGAGTTCAACCAGCTCAAGGAGAGGAACGGGAAGCTGAAAACACT
GCTATCCATCGGAGGGTGGAACTTTGGCACATCCAGGTTCACCACGATGCTGTCCACCTT
CACCAACCGGGAAAAGTTCATCAGGTCTGCCATAGGCCTCCTGAGGACACATGGCTTCGA
CGGGCTGGACCTCTTCTTCTTGTACCCTGGACTCAGAGGCAGCCCCAGGCGTGACCGCTG
GAACTTTCTCTTCTTACTTGAAGAGCTCCTGCTTGCCTTCAGGAGGGAGGCACAGCTCAC
CATGCGTCCGAGGCTGCTGCTCTCTGCTGCTGTCTCTGCGGATCCGCATGTCATCCAAAA
AGCCTATGATGTGCGCCTTCTGGGAAGACTCCTGGATTTCATCAATGTCTTGTCTTATGA
CTTACATGGAAGCTGGGAGAAGGTCACGGGACACAACAGCCCCCTATTCTCTCTGTCTGA
TGACCCCAAATCTTCGGCGTACACCATGAATTACTGGCGAAAGCTTGGGGCGCCCCCGGA
GAAGCTCCTTATGGGTTTTCCCACATATGGACGGACTTTTCGCCTCCTCAAAGCCTCTAA
GAATGAGCTGGG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61831872|ref|XP_584716.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61831872|ref|XP_584716.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               74-280, gnl|bosTau2|chr3 (27796193-27796399)
               

               
               74-280, gnl|Hg17|chr1 (111681306-111681100)
               

               
               74-280, gnl|Mm7|chr3 (105793126-105793332)
               


               
               334-503, gnl|bosTau2|chr3 (27798409-27798578)
               

               
               334-503, gnl|Hg17|chr1 (111678375-111678206)
               

               
               334-503, gnl|Mm7|chr3 (105795949-105796118)
               


               
               626-737, gnl|bosTau2|chr3 (27800935-27801046)
               

               
               626-737, gnl|Hg17|chr1 (111676339-111676228)
               

               
               626-737, gnl|Mm7|chr3 (105798184-105798295)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-280, gnl|bosTau2|chr3 (27796193-27796399)
               

               
               74-280, gnl|Hg17|chr1 (111681306-111681100)
               

               
               74-280, gnl|Mm7|chr3 (105793126-105793332)
               


               
               334-503, gnl|bosTau2|chr3 (27798409-27798578)
               

               
               334-503, gnl|Hg17|chr1 (111678375-111678206)
               

               
               334-503, gnl|Mm7|chr3 (105795949-105796118)
               


               
               626-737, gnl|bosTau2|chr3 (27800935-27801046)
               

               
               626-737, gnl|Hg17|chr1 (111676339-111676228)
               

               
               626-737, gnl|Mm7|chr3 (105798184-105798295)

	74-280, gnl\|bosTau2\|chr3 (27796193-27796399)
	74-280, gnl\|Hg17\|chr1 (111681306-111681100)
	74-280, gnl\|Mm7\|chr3 (105793126-105793332)

	334-503, gnl\|bosTau2\|chr3 (27798409-27798578)
	334-503, gnl\|Hg17\|chr1 (111678375-111678206)
	334-503, gnl\|Mm7\|chr3 (105795949-105796118)

	626-737, gnl\|bosTau2\|chr3 (27800935-27801046)
	626-737, gnl\|Hg17\|chr1 (111676339-111676228)
	626-737, gnl\|Mm7\|chr3 (105798184-105798295)