Ss1.1-Ova1-OVR010017G04.5
|
GGCCTTGCGGCGGCGGCGGCAACAGCGGCAGCGACTCGGCAGCGCTCCGCCGCGTCCCCG
AGTCCCGGGAGTCGGCGCGGCGCGGCAGGGGCAGCCTTCCACCACGGAAAGCCCAGCTGT
CAGCTGCCTCACGGGAAGATGTGTCAACTGGGTAGCAGGCGTGTGCATGTGGCCACCATC
CTGGGACTGCTGTGGTTCTGCCTCACAGATGCCGCTGTGGAGGTCCGGGTCCCTGAAGAC
CCCGTGGTGGCCCTCGTGGGCACCGACGCCACCCTGCGCTGCTCCTTCTCTCCTGGGCCC
AGCTTCAGCCTGGCACAGCTCAACCTCATCTGGCAGCTGACAGACACCAAACAGCTGGTG
CACAGCTTCGCCGAGGGCCGCGACCAGGGCAGCGCCTATGCCAACCGTACCACACTCTTC
CCAGACCTGCTGGCTCAGGGCAACGCGTCCCTGAGGCTGCAGCGCGTGCGCGTGGCTGAT
GAGGGCAGCTTCACCTGCCTGGTGAGCATCCGGGACTTGGACAGCAGCAGTGCCGCAGTC
AGCCTGCAGGTGGCAGCCCCCTACTCAAAGCCCAGCATGACCCTGGAGCCCAACAAGGAC
CTGCGGCCAGGGGACACAGTGACCATCACCTGTTCCAGCTACCGGGGCTATCCTGAGGCT
GAGGTGTTCTGGCAGGACGGGCAGGGTGCGCCCTTGACCAGCAACGTGACCACGTCGCAG
ATGGCCAACGAGCAGGGCTTGTTGGATGCGCGCAGCGTCCTGAGGGTGGTGCTGGGCGCT
AATGGCACCTACAGCTGCCTGGTGCGCAACCCCGTGCTGCAGCAGGACGCTCACAGCTCC
ATTACCATCACG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCCTTGCGGCGGCGGCGGCAACAGCGGCAGCGACTCGGCAGCGCTCCGCCGCGTCCCCG
AGTCCCGGGAGTCGGCGCGGCGCGGCAGGGGCAGCCTTCCACCACGGAAAGCCCAGCTGT
CAGCTGCCTCACGGGAAGATGTGTCAACTGGGTAGCAGGCGTGTGCATGTGGCCACCATC
CTGGGACTGCTGTGGTTCTGCCTCACAGATGCCGCTGTGGAGGTCCGGGTCCCTGAAGAC
CCCGTGGTGGCCCTCGTGGGCACCGACGCCACCCTGCGCTGCTCCTTCTCTCCTGGGCCC
AGCTTCAGCCTGGCACAGCTCAACCTCATCTGGCAGCTGACAGACACCAAACAGCTGGTG
CACAGCTTCGCCGAGGGCCGCGACCAGGGCAGCGCCTATGCCAACCGTACCACACTCTTC
CCAGACCTGCTGGCTCAGGGCAACGCGTCCCTGAGGCTGCAGCGCGTGCGCGTGGCTGAT
GAGGGCAGCTTCACCTGCCTGGTGAGCATCCGGGACTTGGACAGCAGCAGTGCCGCAGTC
AGCCTGCAGGTGGCAGCCCCCTACTCAAAGCCCAGCATGACCCTGGAGCCCAACAAGGAC
CTGCGGCCAGGGGACACAGTGACCATCACCTGTTCCAGCTACCGGGGCTATCCTGAGGCT
GAGGTGTTCTGGCAGGACGGGCAGGGTGCGCCCTTGACCAGCAACGTGACCACGTCGCAG
ATGGCCAACGAGCAGGGCTTGTTGGATGCGCGCAGCGTCCTGAGGGTGGTGCTGGGCGCT
AATGGCACCTACAGCTGCCTGGTGCGCAACCCCGTGCTGCAGCAGGACGCTCACAGCTCC
ATTACCATCACG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
83-211, gnl|bosTau2|chr10 (12126514-12126383) |
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83-211, gnl|canFam2|chr30 (39973894-39974024) |
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83-211, gnl|echTel1|scaffold_311965 (45262-45392) |
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83-211, gnl|hg17|chr15 (71778949-71779082) |
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83-211, gnl|Hg17|chr15 (71778978-71779115) |
|
83-211, gnl|loxAfr1|scaffold_80320 (5625-5758) |
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83-211, gnl|mm7|chr9 (58569499-58569368) |
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83-211, gnl|Mm7|chr9 (58569470-58569333) |
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83-211, gnl|panTro1|chr16_random (20907905-20908038) |
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83-211, gnl|rheMac2|chr7 (52383264-52383397) |
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83-211, gnl|rn3|chr8 (62365460-62365329) |
| |
|
214-556, gnl|bosTau2|chr10 (12122380-12122044) |
|
214-556, gnl|Hg17|chr15 (71783055-71783391) |
|
214-556, gnl|Mm7|chr9 (58564958-58564610) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
83-211, gnl|bosTau2|chr10 (12126514-12126383) |
|
83-211, gnl|canFam2|chr30 (39973894-39974024) |
|
83-211, gnl|echTel1|scaffold_311965 (45262-45392) |
|
83-211, gnl|hg17|chr15 (71778949-71779082) |
|
83-211, gnl|Hg17|chr15 (71778978-71779115) |
|
83-211, gnl|loxAfr1|scaffold_80320 (5625-5758) |
|
83-211, gnl|mm7|chr9 (58569499-58569368) |
|
83-211, gnl|Mm7|chr9 (58569470-58569333) |
|
83-211, gnl|panTro1|chr16_random (20907905-20908038) |
|
83-211, gnl|rheMac2|chr7 (52383264-52383397) |
|
83-211, gnl|rn3|chr8 (62365460-62365329) |
| |
|
214-556, gnl|bosTau2|chr10 (12122380-12122044) |
|
214-556, gnl|Hg17|chr15 (71783055-71783391) |
|
214-556, gnl|Mm7|chr9 (58564958-58564610) |
