Ss1.1-Ova1-OVR010017H07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGCGCGGGGCTCCGCGCGTCGGAGGAAGAAGGTCGTGGCCAAGGTTTCACTGATGGG ATATATCAAGGGAAGCAGCTTTTTCAGTGCGATGAAGATTGTGGAGTATTTGTTGCGTTG GACAAGCTAGAAATCATAGACGACGATGACCCTGGACTGGAGAGTGATTTTGCAGGGCCA GTGGACACAATGCAGGTTGAACTTCCCCCTCTGGAAATAAACTCCAGAGTTTCTTTGAAG CTTGGAGAAACTATAGAATCTGGAACGGTTATCTTCTGTGATGTTTTGCCAGGCAAAGAA AGCTTAGGATATTTTGTTGGTGTGGATATGGATAATCCTATTGGCAACTGGGATGGAAGA TTTGATGGAGTACAGCTTTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCTTGCATATC AATGATATCATCCCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATG CCAAGAGGTGTTGGGGACAAAGGTTCATCCAGCCATAACAAACCAAAGGCTACAGGATCT ACCTCAGACCCTGGAAATAGAAACAGATCTGAATTATTTTATACTTTAAATGGGTCTTCT GTTGATTCACAACCACAATCCAAATCAAAAAATTCATGGTACATTGATGAAGTTGCCGAA GACCCTGCAAAATCGCTTACGGAGCTATCTCCGGACTTTGGACATGCTTCACCACCACTG CAGCCTCCTTCCCTGAATGCACTTGCCAACGAGAACAGATTTCACTCTTTACCGTTCAGC CTGACAAAGATGCCCAACTCCAATGGGAGTATTGGCCACAGCCCGCTGTCTCTGTCGGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGCGCGGGGCTCCGCGCGTCGGAGGAAGAAGGTCGTGGCCAAGGTTTCACTGATGGG ATATATCAAGGGAAGCAGCTTTTTCAGTGCGATGAAGATTGTGGAGTATTTGTTGCGTTG GACAAGCTAGAAATCATAGACGACGATGACCCTGGACTGGAGAGTGATTTTGCAGGGCCA GTGGACACAATGCAGGTTGAACTTCCCCCTCTGGAAATAAACTCCAGAGTTTCTTTGAAG CTTGGAGAAACTATAGAATCTGGAACGGTTATCTTCTGTGATGTTTTGCCAGGCAAAGAA AGCTTAGGATATTTTGTTGGTGTGGATATGGATAATCCTATTGGCAACTGGGATGGAAGA TTTGATGGAGTACAGCTTTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCTTGCATATC AATGATATCATCCCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATG CCAAGAGGTGTTGGGGACAAAGGTTCATCCAGCCATAACAAACCAAAGGCTACAGGATCT ACCTCAGACCCTGGAAATAGAAACAGATCTGAATTATTTTATACTTTAAATGGGTCTTCT GTTGATTCACAACCACAATCCAAATCAAAAAATTCATGGTACATTGATGAAGTTGCCGAA GACCCTGCAAAATCGCTTACGGAGCTATCTCCGGACTTTGGACATGCTTCACCACCACTG CAGCCTCCTTCCCTGAATGCACTTGCCAACGAGAACAGATTTCACTCTTTACCGTTCAGC CTGACAAAGATGCCCAACTCCAATGGGAGTATTGGCCACAGCCCGCTGTCTCTGTCGGTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 185-304, + strand, RNAz p=0.561518 | |
| 196-315, + strand, RNAz p=0.54612 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 185-304, + strand, RNAz p=0.561518 | |
| 196-315, + strand, RNAz p=0.54612 |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 26-331, gnl|bosTau2|chr18 (18359742-18360047) | |
| 26-331, gnl|canFam2|chr2 (67505360-67505012) | |
| 26-331, gnl|danRer3|chr7 (27669576-27669207) | |
| 26-331, gnl|dasNov1|scaffold_12405 (54754-54418) | |
| 26-331, gnl|echTel1|scaffold_311151 (61127-60792) | |
| 26-331, gnl|fr1|chrUn (218358433-218358780) | |
| 26-331, gnl|galGal2|chr11 (6223347-6223009) | |
| 26-331, gnl|hg17|chr16 (49342988-49343351) | |
| 26-331, gnl|Hg17|chr16 (49343014-49343319) | |
| 26-331, gnl|loxAfr1|scaffold_13271 (29875-30210) | |
| 26-331, gnl|mm7|chr8 (87299433-87299763) | |
| 26-331, gnl|Mm7|chr8 (87299448-87299753) | |
| 26-331, gnl|monDom2|scaffold_35 (15684897-15685231) | |
| 26-331, gnl|oryCun1|scaffold_207463 (73061-72705) | |
| 26-331, gnl|panTro1|chrUn_random (13165317-13165658) | |
| 26-331, gnl|rheMac2|chr20 (48972447-48972788) | |
| 26-331, gnl|rn3|chr19 (19647821-19647468) | |
| 26-331, gnl|tetNig1|chrUn_random (99252257-99251924) | |
| 26-331, gnl|xenTro1|scaffold_167 (305577-305904) | |
| 434-536, gnl|bosTau2|chr18 (18391160-18391262) | |
| 434-536, gnl|canFam2|chr2 (67473743-67473617) | |
| 434-536, gnl|dasNov1|scaffold_20231 (3061-2929) | |
| 434-536, gnl|echTel1|scaffold_311151 (26784-26653) | |
| 434-536, gnl|galGal2|chr11 (6220872-6220742) | |
| 434-536, gnl|hg17|chr16 (49367575-49367707) | |
| 434-536, gnl|Hg17|chr16 (49367588-49367690) | |
| 434-536, gnl|loxAfr1|scaffold_138717 (1042-911) | |
| 434-536, gnl|mm7|chr8 (87311643-87311770) | |
| 434-536, gnl|Mm7|chr8 (87311656-87311758) | |
| 434-536, gnl|monDom2|scaffold_35 (15698940-15699072) | |
| 434-536, gnl|oryCun1|scaffold_207463 (47274-47142) | |
| 434-536, gnl|panTro1|chrUn_random (13190108-13190240) | |
| 434-536, gnl|rheMac2|chr20 (48997024-48997156) | |
| 434-536, gnl|rn3|chr19 (19633693-19633567) | |
| 434-536, gnl|xenTro1|scaffold_167 (308920-309038) | |
| 651-840, gnl|bosTau2|chr18 (18396483-18396672) | |
| 651-840, gnl|canFam2|chr2 (67465531-67465112) | |
| 651-840, gnl|danRer3|chr7 (27659695-27659275) | |
| 651-840, gnl|dasNov1|scaffold_12405 (18138-17725) | |
| 651-840, gnl|echTel1|scaffold_311151 (16028-15609) | |
| 651-840, gnl|fr1|chrUn (282939545-282939144) | |
| 651-840, gnl|galGal2|chr11 (6216694-6216282) | |
| 651-840, gnl|hg17|chr16 (49371047-49371463) | |
| 651-840, gnl|Hg17|chr16 (49371076-49371264) | |
| 651-840, gnl|mm7|chr8 (87321788-87322206) | |
| 651-840, gnl|Mm7|chr8 (87321818-87322007) | |
| 651-840, gnl|monDom2|scaffold_35 (15702565-15702983) | |
| 651-840, gnl|oryCun1|scaffold_207463 (39133-38715) | |
| 651-840, gnl|panTro1|chrUn_random (13193580-13193996) | |
| 651-840, gnl|rheMac2|chr20 (49000467-49000883) | |
| 651-840, gnl|rn3|chr19 (19624113-19623695) | |
| 651-840, gnl|xenTro1|scaffold_167 (318256-318674) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 26-331, gnl|bosTau2|chr18 (18359742-18360047) | |
| 26-331, gnl|canFam2|chr2 (67505360-67505012) | |
| 26-331, gnl|danRer3|chr7 (27669576-27669207) | |
| 26-331, gnl|dasNov1|scaffold_12405 (54754-54418) | |
| 26-331, gnl|echTel1|scaffold_311151 (61127-60792) | |
| 26-331, gnl|fr1|chrUn (218358433-218358780) | |
| 26-331, gnl|galGal2|chr11 (6223347-6223009) | |
| 26-331, gnl|hg17|chr16 (49342988-49343351) | |
| 26-331, gnl|Hg17|chr16 (49343014-49343319) | |
| 26-331, gnl|loxAfr1|scaffold_13271 (29875-30210) | |
| 26-331, gnl|mm7|chr8 (87299433-87299763) | |
| 26-331, gnl|Mm7|chr8 (87299448-87299753) | |
| 26-331, gnl|monDom2|scaffold_35 (15684897-15685231) | |
| 26-331, gnl|oryCun1|scaffold_207463 (73061-72705) | |
| 26-331, gnl|panTro1|chrUn_random (13165317-13165658) | |
| 26-331, gnl|rheMac2|chr20 (48972447-48972788) | |
| 26-331, gnl|rn3|chr19 (19647821-19647468) | |
| 26-331, gnl|tetNig1|chrUn_random (99252257-99251924) | |
| 26-331, gnl|xenTro1|scaffold_167 (305577-305904) | |
| 434-536, gnl|bosTau2|chr18 (18391160-18391262) | |
| 434-536, gnl|canFam2|chr2 (67473743-67473617) | |
| 434-536, gnl|dasNov1|scaffold_20231 (3061-2929) | |
| 434-536, gnl|echTel1|scaffold_311151 (26784-26653) | |
| 434-536, gnl|galGal2|chr11 (6220872-6220742) | |
| 434-536, gnl|hg17|chr16 (49367575-49367707) | |
| 434-536, gnl|Hg17|chr16 (49367588-49367690) | |
| 434-536, gnl|loxAfr1|scaffold_138717 (1042-911) | |
| 434-536, gnl|mm7|chr8 (87311643-87311770) | |
| 434-536, gnl|Mm7|chr8 (87311656-87311758) | |
| 434-536, gnl|monDom2|scaffold_35 (15698940-15699072) | |
| 434-536, gnl|oryCun1|scaffold_207463 (47274-47142) | |
| 434-536, gnl|panTro1|chrUn_random (13190108-13190240) | |
| 434-536, gnl|rheMac2|chr20 (48997024-48997156) | |
| 434-536, gnl|rn3|chr19 (19633693-19633567) | |
| 434-536, gnl|xenTro1|scaffold_167 (308920-309038) | |
| 651-840, gnl|bosTau2|chr18 (18396483-18396672) | |
| 651-840, gnl|canFam2|chr2 (67465531-67465112) | |
| 651-840, gnl|danRer3|chr7 (27659695-27659275) | |
| 651-840, gnl|dasNov1|scaffold_12405 (18138-17725) | |
| 651-840, gnl|echTel1|scaffold_311151 (16028-15609) | |
| 651-840, gnl|fr1|chrUn (282939545-282939144) | |
| 651-840, gnl|galGal2|chr11 (6216694-6216282) | |
| 651-840, gnl|hg17|chr16 (49371047-49371463) | |
| 651-840, gnl|Hg17|chr16 (49371076-49371264) | |
| 651-840, gnl|mm7|chr8 (87321788-87322206) | |
| 651-840, gnl|Mm7|chr8 (87321818-87322007) | |
| 651-840, gnl|monDom2|scaffold_35 (15702565-15702983) | |
| 651-840, gnl|oryCun1|scaffold_207463 (39133-38715) | |
| 651-840, gnl|panTro1|chrUn_random (13193580-13193996) | |
| 651-840, gnl|rheMac2|chr20 (49000467-49000883) | |
| 651-840, gnl|rn3|chr19 (19624113-19623695) | |
| 651-840, gnl|xenTro1|scaffold_167 (318256-318674) |