Non-Coding RNA Search

Ss1.1-Ova1-OVR010022D05.5

Sequence:


               
               CACCATGGGTGTGCAAGCGAGGACTTTTTTTTTGGCCAGTGAGCCTGAAAAGGGATGATC
CATGACAGGCACCTTTAAACAGAGACACATTTTTCTGGAAAAGGCAACTTTTACCAGTAA
AGTTGAAGCTGCGGGGGTGGGCTGATGACTGATAGCCAGCTGGCCCGGCGCCCCCTGGAA
GCTGCTTGTCATCCAGAGAGACTGGCTCAGACGCCTTTCTCTCCCTTTACTTCACCTGCC
CGAGTCTTTTCCAGCAGCCTTGGCCCAGCCTCTGCCAGCGGGGCCTGGCTCAGGGCACAC
GGACGTGGGGGATGGGCTTGCCGTCTGAGGTCTGGCGACGGGCGCACTTTTCCCACTCCG
GGCCGTCTGGGAGACTGTGCCGGAAAGCCAGGGGCTGCCCGCGCTTGCAAGTGCCAGTGT
GGGCTGGAAATTGAGGCCAGGCTCCACCCCTTCTTCCTCCTTTATTCACTAGGAGCAAAG
AAATGGGTCACACGTAACTTTCCTGAACTTTCTTTCTTTGTTTCTCTGCAAAAGACGGAG
AGCGTAGTGGTCCATCAAGCAATGATGAATCTTTTTTGTTTGTTTGTTTGTTTGTTTTTA
AAGTAACAACTGCTCTCTATGAATTCCGTTTCTTTGAACAAGAACAGGGCTGAGGGCCTT
TGGGTGCGGGAGGCTTGATTCCAGAGCTGTGTCTTTTCCATTTGGTTCTCTCTTAGGTTC
GCAGGTGGTGGCCCGGATGATGTTCAGGCCTCGCAGGTGGCTCTTTGACCCCAGTCAGTG
AGAAGCCACAGTGATGCCCCTCTCTCCTTCCCGTGCGTTTTCTCTGCAGGGTTCAGAGAA
GTCTGGTTGCGCGGGCCCCTCGGCCCTGGAATTTGCAGCCGCAGCACTGATTAGAATGGG
GGTCTGGTTTCCTGGAATGTGCAAGGTCTTGCTTCTGTTTCTGCTGCCTCCACGCTCCAG
ACCAGCCCTGGGCCAGACTCTGGGCTGGAGCCGCAGCCGACAAGTTCCTTGGCATTTAAT
GGGGTGGGACAGACAGGATGCCGTCACTCAACTGAAAACATGGAGAAAATGAGTCTTGCA
GGACATCTTTGCTTCATTCACTGGGTTATGCCGCTTTTTTTTTTTTTTTCCTCCCCCAGG
CAACTGTTCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCATGGGTGTGCAAGCGAGGACTTTTTTTTTGGCCAGTGAGCCTGAAAAGGGATGATC
CATGACAGGCACCTTTAAACAGAGACACATTTTTCTGGAAAAGGCAACTTTTACCAGTAA
AGTTGAAGCTGCGGGGGTGGGCTGATGACTGATAGCCAGCTGGCCCGGCGCCCCCTGGAA
GCTGCTTGTCATCCAGAGAGACTGGCTCAGACGCCTTTCTCTCCCTTTACTTCACCTGCC
CGAGTCTTTTCCAGCAGCCTTGGCCCAGCCTCTGCCAGCGGGGCCTGGCTCAGGGCACAC
GGACGTGGGGGATGGGCTTGCCGTCTGAGGTCTGGCGACGGGCGCACTTTTCCCACTCCG
GGCCGTCTGGGAGACTGTGCCGGAAAGCCAGGGGCTGCCCGCGCTTGCAAGTGCCAGTGT
GGGCTGGAAATTGAGGCCAGGCTCCACCCCTTCTTCCTCCTTTATTCACTAGGAGCAAAG
AAATGGGTCACACGTAACTTTCCTGAACTTTCTTTCTTTGTTTCTCTGCAAAAGACGGAG
AGCGTAGTGGTCCATCAAGCAATGATGAATCTTTTTTGTTTGTTTGTTTGTTTGTTTTTA
AAGTAACAACTGCTCTCTATGAATTCCGTTTCTTTGAACAAGAACAGGGCTGAGGGCCTT
TGGGTGCGGGAGGCTTGATTCCAGAGCTGTGTCTTTTCCATTTGGTTCTCTCTTAGGTTC
GCAGGTGGTGGCCCGGATGATGTTCAGGCCTCGCAGGTGGCTCTTTGACCCCAGTCAGTG
AGAAGCCACAGTGATGCCCCTCTCTCCTTCCCGTGCGTTTTCTCTGCAGGGTTCAGAGAA
GTCTGGTTGCGCGGGCCCCTCGGCCCTGGAATTTGCAGCCGCAGCACTGATTAGAATGGG
GGTCTGGTTTCCTGGAATGTGCAAGGTCTTGCTTCTGTTTCTGCTGCCTCCACGCTCCAG
ACCAGCCCTGGGCCAGACTCTGGGCTGGAGCCGCAGCCGACAAGTTCCTTGGCATTTAAT
GGGGTGGGACAGACAGGATGCCGTCACTCAACTGAAAACATGGAGAAAATGAGTCTTGCA
GGACATCTTTGCTTCATTCACTGGGTTATGCCGCTTTTTTTTTTTTTTTCCTCCCCCAGG
CAACTGTTCCTG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               5-570, gnl|bosTau2|chr26 (29413728-29413115)
               

               
               5-570, gnl|Hg17|chr10 (124224373-124225023)
               

               
               5-570, gnl|Mm7|chr7 (127302928-127303534)
               


               
               605-1120, gnl|bosTau2|chr26 (29413089-29412561)
               

               
               605-1120, gnl|Hg17|chr10 (124225033-124225545)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-570, gnl|bosTau2|chr26 (29413728-29413115)
               

               
               5-570, gnl|Hg17|chr10 (124224373-124225023)
               

               
               5-570, gnl|Mm7|chr7 (127302928-127303534)
               


               
               605-1120, gnl|bosTau2|chr26 (29413089-29412561)
               

               
               605-1120, gnl|Hg17|chr10 (124225033-124225545)

	5-570, gnl\|bosTau2\|chr26 (29413728-29413115)
	5-570, gnl\|Hg17\|chr10 (124224373-124225023)
	5-570, gnl\|Mm7\|chr7 (127302928-127303534)

	605-1120, gnl\|bosTau2\|chr26 (29413089-29412561)
	605-1120, gnl\|Hg17\|chr10 (124225033-124225545)