Ss1.1-Ova1-OVR010026H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTTCGGGTCCCTCCACCGCACTGCGCTGGGACTCTAGGCCGCCAGCGCTGTCGCCGCG AAGAAGTGTCCCGCGGCGCCCCCCTCCCGCCGCGCCGCCCGTCGGGCATGGACTCAGGCC GGGACTTCCTGACCCTGCATGGCCTACAGGATGACAAGGACCTACAGGCACTGCTGAAGG GTGGCCAGCTTTTGAAGGTGAAATCTAACTCATGGCGGAGAGAACGCTTCTACAAGTTGC AGGAGGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGAACACCTGAGTCGC AGCTGTTCTCCATTGAGGACATTCAGGAGGTGCGGATGGGGCACCGTACCGAGGGCCTGG AGAAGTTTGCCCGGGACGTGCCTGAAGACCGCTGCTTCTCCATCGTCTTCAAGGACCAGC GCAACACCCTAGACCTCATCGCCCCATCACCGGCTGACGCCCAGCACTGGGTGCTGGGCC TGCGCAAGATCATTCACCACTCAGGCTCCATGGATCAGCGGCAGAAGCTGCAGCACTGGA TTCACTCCTGCTTGCGAAAAGCTGACAAAAACAAGGACAACAAGATGAGCTTCAAGGAGG TGCAGAACTTCCTGAAGGAGCTCAACATCCAGGTGGATGACAGCTATGCCCGGAAGATCT TCAGGGAATGTGACCACTCTCAGACGGACTCTCTGGAAGATGAGGAGATTGAGACTTTCT ACAAGATGCTGACCCAGAGGAAGGAGATTGACCGCATCTTTGAGGAGGCTGCTGGCTCTG AGGAGGCCCTATCAGTGGATCAGTTAGTGGCGTTCCTGCAGCACCAGCAGCGGGAGGAGG CAGCGGGGCCTGCCCTGGCGCTCTCTCTCATTGAGCGCTATGAGCCCAGCGAGACGGCCA AGGCGCAGAGGCAGATGACCAAGGACGGCTTCCTTATGTACCTGCTCTCCGCCGATGGCA GCGCCTTCAACTTGGCGCACCGGCGGGTCTACCAGGACATGGGCCAGCCGCTCAGCCACT ACCTGGTGTCGTCCTCGCACAACACTTACCTGCTGCCTCTCGGAACCCAGGAGCTGGCCC CATGCCTGGAGCTGTCCCCAGTTCCATCAGGAATGACACTGCAGCCCTCTCCACCCTCAC TGGCCCTAGGTTGAGGGATTTTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTTCGGGTCCCTCCACCGCACTGCGCTGGGACTCTAGGCCGCCAGCGCTGTCGCCGCG AAGAAGTGTCCCGCGGCGCCCCCCTCCCGCCGCGCCGCCCGTCGGGCATGGACTCAGGCC GGGACTTCCTGACCCTGCATGGCCTACAGGATGACAAGGACCTACAGGCACTGCTGAAGG GTGGCCAGCTTTTGAAGGTGAAATCTAACTCATGGCGGAGAGAACGCTTCTACAAGTTGC AGGAGGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGAACACCTGAGTCGC AGCTGTTCTCCATTGAGGACATTCAGGAGGTGCGGATGGGGCACCGTACCGAGGGCCTGG AGAAGTTTGCCCGGGACGTGCCTGAAGACCGCTGCTTCTCCATCGTCTTCAAGGACCAGC GCAACACCCTAGACCTCATCGCCCCATCACCGGCTGACGCCCAGCACTGGGTGCTGGGCC TGCGCAAGATCATTCACCACTCAGGCTCCATGGATCAGCGGCAGAAGCTGCAGCACTGGA TTCACTCCTGCTTGCGAAAAGCTGACAAAAACAAGGACAACAAGATGAGCTTCAAGGAGG TGCAGAACTTCCTGAAGGAGCTCAACATCCAGGTGGATGACAGCTATGCCCGGAAGATCT TCAGGGAATGTGACCACTCTCAGACGGACTCTCTGGAAGATGAGGAGATTGAGACTTTCT ACAAGATGCTGACCCAGAGGAAGGAGATTGACCGCATCTTTGAGGAGGCTGCTGGCTCTG AGGAGGCCCTATCAGTGGATCAGTTAGTGGCGTTCCTGCAGCACCAGCAGCGGGAGGAGG CAGCGGGGCCTGCCCTGGCGCTCTCTCTCATTGAGCGCTATGAGCCCAGCGAGACGGCCA AGGCGCAGAGGCAGATGACCAAGGACGGCTTCCTTATGTACCTGCTCTCCGCCGATGGCA GCGCCTTCAACTTGGCGCACCGGCGGGTCTACCAGGACATGGGCCAGCCGCTCAGCCACT ACCTGGTGTCGTCCTCGCACAACACTTACCTGCTGCCTCTCGGAACCCAGGAGCTGGCCC CATGCCTGGAGCTGTCCCCAGTTCCATCAGGAATGACACTGCAGCCCTCTCCACCCTCAC TGGCCCTAGGTTGAGGGATTTTAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 549-666, + strand, RNAz p=0.586981 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 549-666, + strand, RNAz p=0.586981 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 141-306, gnl|bosTau2|chr22 (8960754-8960919) | |
| 141-306, gnl|Hg17|chr3 (38036848-38036683) | |
| 141-306, gnl|Mm7|chr9 (118764959-118764794) | |
| 307-531, gnl|bosTau2|chr22 (8964142-8964366) | |
| 307-531, gnl|canFam2|chr23 (10803562-10803811) | |
| 307-531, gnl|danRer3|chrNA (169266836-169267084) | |
| 307-531, gnl|dasNov1|scaffold_23226 (42729-42474) | |
| 307-531, gnl|fr1|chrUn (122600173-122599933) | |
| 307-531, gnl|galGal2|chr2 (4115416-4115665) | |
| 307-531, gnl|hg17|chr3 (38032978-38033227) | |
| 307-531, gnl|Hg17|chr3 (38033214-38032990) | |
| 307-531, gnl|loxAfr1|scaffold_3459 (70848-71093) | |
| 307-531, gnl|mm7|chr9 (118761118-118761367) | |
| 307-531, gnl|Mm7|chr9 (118761354-118761130) | |
| 307-531, gnl|oryCun1|scaffold_192129 (8556-8305) | |
| 307-531, gnl|panTro1|chr2 (39138757-39139006) | |
| 307-531, gnl|rheMac2|chr2 (98527073-98526824) | |
| 307-531, gnl|rn3|chr8 (124052873-124053117) | |
| 307-531, gnl|tetNig1|chr6 (3145926-3146165) | |
| 307-531, gnl|xenTro1|scaffold_318 (256771-256522) | |
| 536-666, gnl|bosTau2|chr22 (8970971-8971101) | |
| 536-666, gnl|canFam2|chr23 (10797215-10797380) | |
| 536-666, gnl|danRer3|chrNA (169265852-169266016) | |
| 536-666, gnl|dasNov1|scaffold_251967 (278-113) | |
| 536-666, gnl|echTel1|scaffold_115756 (1013-1179) | |
| 536-666, gnl|fr1|chrUn (122600375-122600218) | |
| 536-666, gnl|galGal2|chr2 (4110780-4110936) | |
| 536-666, gnl|hg17|chr3 (38028029-38028194) | |
| 536-666, gnl|Hg17|chr3 (38028168-38028038) | |
| 536-666, gnl|loxAfr1|scaffold_53896 (1021-882) | |
| 536-666, gnl|mm7|chr9 (118756284-118756443) | |
| 536-666, gnl|Mm7|chr9 (118756417-118756287) | |
| 536-666, gnl|oryCun1|scaffold_192129 (8990-8832) | |
| 536-666, gnl|panTro1|chr2 (39133784-39133949) | |
| 536-666, gnl|rheMac2|chr2 (98531747-98531582) | |
| 536-666, gnl|rn3|chr8 (124047535-124047694) | |
| 536-666, gnl|tetNig1|chr6 (3145709-3145860) | |
| 536-666, gnl|xenTro1|scaffold_318 (260356-260224) | |
| 897-1064, gnl|bosTau2|chr19 (37227293-37227461) | |
| 897-1064, gnl|Hg17|chr17 (40551386-40551218) | |
| 897-1064, gnl|Mm7|chr11 (103187004-103186836) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 141-306, gnl|bosTau2|chr22 (8960754-8960919) | |
| 141-306, gnl|Hg17|chr3 (38036848-38036683) | |
| 141-306, gnl|Mm7|chr9 (118764959-118764794) | |
| 307-531, gnl|bosTau2|chr22 (8964142-8964366) | |
| 307-531, gnl|canFam2|chr23 (10803562-10803811) | |
| 307-531, gnl|danRer3|chrNA (169266836-169267084) | |
| 307-531, gnl|dasNov1|scaffold_23226 (42729-42474) | |
| 307-531, gnl|fr1|chrUn (122600173-122599933) | |
| 307-531, gnl|galGal2|chr2 (4115416-4115665) | |
| 307-531, gnl|hg17|chr3 (38032978-38033227) | |
| 307-531, gnl|Hg17|chr3 (38033214-38032990) | |
| 307-531, gnl|loxAfr1|scaffold_3459 (70848-71093) | |
| 307-531, gnl|mm7|chr9 (118761118-118761367) | |
| 307-531, gnl|Mm7|chr9 (118761354-118761130) | |
| 307-531, gnl|oryCun1|scaffold_192129 (8556-8305) | |
| 307-531, gnl|panTro1|chr2 (39138757-39139006) | |
| 307-531, gnl|rheMac2|chr2 (98527073-98526824) | |
| 307-531, gnl|rn3|chr8 (124052873-124053117) | |
| 307-531, gnl|tetNig1|chr6 (3145926-3146165) | |
| 307-531, gnl|xenTro1|scaffold_318 (256771-256522) | |
| 536-666, gnl|bosTau2|chr22 (8970971-8971101) | |
| 536-666, gnl|canFam2|chr23 (10797215-10797380) | |
| 536-666, gnl|danRer3|chrNA (169265852-169266016) | |
| 536-666, gnl|dasNov1|scaffold_251967 (278-113) | |
| 536-666, gnl|echTel1|scaffold_115756 (1013-1179) | |
| 536-666, gnl|fr1|chrUn (122600375-122600218) | |
| 536-666, gnl|galGal2|chr2 (4110780-4110936) | |
| 536-666, gnl|hg17|chr3 (38028029-38028194) | |
| 536-666, gnl|Hg17|chr3 (38028168-38028038) | |
| 536-666, gnl|loxAfr1|scaffold_53896 (1021-882) | |
| 536-666, gnl|mm7|chr9 (118756284-118756443) | |
| 536-666, gnl|Mm7|chr9 (118756417-118756287) | |
| 536-666, gnl|oryCun1|scaffold_192129 (8990-8832) | |
| 536-666, gnl|panTro1|chr2 (39133784-39133949) | |
| 536-666, gnl|rheMac2|chr2 (98531747-98531582) | |
| 536-666, gnl|rn3|chr8 (124047535-124047694) | |
| 536-666, gnl|tetNig1|chr6 (3145709-3145860) | |
| 536-666, gnl|xenTro1|scaffold_318 (260356-260224) | |
| 897-1064, gnl|bosTau2|chr19 (37227293-37227461) | |
| 897-1064, gnl|Hg17|chr17 (40551386-40551218) | |
| 897-1064, gnl|Mm7|chr11 (103187004-103186836) |